CN186316

Overview
NameCN186316
Unique NameCN186316
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length461
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN186316 vs. ExPASy Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 4.760e-34
Identity = 65/78 (83.33%), Postives = 72/78 (92.31%), Query Frame = 3 
Query:   66 MGGGNGQKSKMAREKNMEKQRAAGKGSQLESNKKAMSIQCKVCMQTFICTTSEVKCKEHAEARHPKSDLFTCFPHLKK 299
            MGGGN QKS MAR KN+EK +AAGKGSQLE+NKKAMSIQCKVCMQTFICTTSEVKC+EHAEA+HPK+D+  CFPHLKK
Sbjct:    1 MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK 78
The following BLAST results are available for this feature:
BLAST of CN186316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2309_ARATH4.760e-3483.33Uncharacterized protein At2g23090 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002L11_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002L11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186316 ID=CN186316; Name=CN186316; organism=Citrus sinensis; type=EST; length=461bp
AGGATTTTGGGTATTTTTATTCGTAACTTAACGATTCCTGTTAGCTTCTG
TGGTTTGTAAAGGAAATGGGAGGCGGCAACGGCCAGAAATCAAAGATGGC
TCGTGAGAAGAACATGGAGAAGCAGAGAGCAGCTGGCAAGGGGAGTCAGC
TGGAGTCAAACAAGAAAGCCATGTCCATCCAGTGCAAGGTATGCATGCAG
ACGTTCATTTGCACCACATCTGAGGTGAAGTGCAAGGAACATGCCGAAGC
CAGACACCCCAAATCTGATTTATTTACATGTTTCCCCCATTTAAAGAAAT
GAAAAACCAATAATTTGATTATGTATTTGGAGATGGGTTTAAAGCCCTCG
TCAGTATGTGTCTTGCTGTGGGTTAAAATTAGAAAGATTTTGGGAAAAAG
AGGGATCCTTCCAGTCTTATCAATACTAATAATTAACTATTTGCNAAAAA
AAAAAAAAAAA
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