CX674932

Overview
NameCX674932
Unique NameCX674932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length865
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674932 vs. ExPASy Swiss-Prot
Match: SHKC_DICDI (Dual specificity protein kinase shkC OS=Dictyostelium discoideum GN=shkC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.365e-14
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = -1
Query:  455 SNILRDDFGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIA--NERPPFRAPTKHYAYGLRELIEDCWSEEPFRRPAFRQILMKLDHI 862
            SN+L D+   +K+ DFGLS L +    +K+    +  + +  Y APEV   +E++   DV+SF ++L E++    PF   +E E  +  +   +ERPP           LR LIE CW +EP  RP+F++I+  LDH+
Sbjct:  151 SNLLVDENMRVKICDFGLSALKQKHKMLKDQ---SSAKGTPLYMAPEVMMFKEFNESSDVYSFGIVLWEILTRKEPFSHHRELEKFREAVCVKHERPPI---PNDCLDSLRRLIEKCWDKEPISRPSFKEIISALDHV 282          
BLAST of CX674932 vs. ExPASy Swiss-Prot
Match: PYK3_DICDI (Dual specificity protein kinase pyk3 OS=Dictyostelium discoideum GN=pyk3 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.155e-13
Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = -1
Query:  461 NILRDDFGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFP-TKQEKEVPKAYIANERPPFRAPTKHYAYGLRELIEDCWSEEPFRRPAFRQILMKLD 859
            NIL D+F ++K+ADFGL      A T+ +D  ++   T+ R+ +PE+ K   Y+ KVDV+SF L++ E+  G  PF          KA   N RP   A        LR+LI  CW+ +P +RP+F +IL +L+
Sbjct: 1179 NILLDEFKNIKIADFGL------ATTLSDDMTLS-GITNPRWRSPELTKGLVYNEKVDVYSFGLVVYEIYTGKIPFEGLDGTASAAKAAFENYRP---AIPPDCPVSLRKLITKCWASDPSQRPSFTEILTELE 1302          
BLAST of CX674932 vs. ExPASy Swiss-Prot
Match: LIMKA_DICDI (Probable LIM domain-containing serine/threonine-protein kinase DDB_G0287001 OS=Dictyostelium discoideum GN=DDB_G0287001 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.574e-13
Identity = 45/147 (30.61%), Postives = 79/147 (53.74%), Query Frame = -1
Query:  422 ILRDDFGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERP--PFRAPTKHYAYGLRELIEDCWSEEPFRRPAFRQILMKLDHISDQLSIKRHWK 856
            ++ +DF   KV DFG S+ +  A  +  +   +C      Y +PE++K   YD   DV++F ++L E+I    P+       +P      ERP  P   P+++      +LI+ CW+++P +RP+F++I   L  IS+ L++KR+ K
Sbjct:  516 LITEDFT-AKVIDFGTSRNVDLAKQMTLNLGTSC------YMSPELFKGNGYDETCDVYAFGIVLWEIIARKEPYENINSWSIPVLVAKGERPTIPADCPSEY-----SKLIKACWTDKPKKRPSFKEICDTLKKISESLTLKRNKK 650          
BLAST of CX674932 vs. ExPASy Swiss-Prot
Match: LIMKB_DICDI (Probable LIM domain-containing serine/threonine-protein kinase DDB_G0286997 OS=Dictyostelium discoideum GN=DDB_G0286997 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.733e-13
Identity = 44/147 (29.93%), Postives = 79/147 (53.74%), Query Frame = -1
Query:  422 ILRDDFGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERP--PFRAPTKHYAYGLRELIEDCWSEEPFRRPAFRQILMKLDHISDQLSIKRHWK 856
            ++ +DF   KV DFG S+ +  A  +  +   +C      Y +PE++K   YD   DV++F ++L E+I    P+       +P      +RP  P   P+++      +LI+ CW+++P +RP+F++I   L  IS+ L++KR+ K
Sbjct:  832 LITEDFT-AKVIDFGTSRNVDLAKHMTMNLGTSC------YMSPELFKGNGYDETCDVYAFGIVLWEIIARKEPYENINSWSIPVMVAKGDRPTIPADCPSEY-----SKLIKACWTDKPKKRPSFKEICDTLKKISESLTLKRNKK 966          
BLAST of CX674932 vs. ExPASy Swiss-Prot
Match: DRKD_DICDI (Probable serine/threonine-protein kinase drkD OS=Dictyostelium discoideum GN=drkD PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.779e-13
Identity = 50/133 (37.59%), Postives = 69/133 (51.88%), Query Frame = -1
Query:  473 NILRDDFGHLKVADFGLS--KLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRA--PTKHYAYGLRELIEDCWSEEPFRRPAFRQIL 859
            N+L DD   +KVADFGL+  K   FA T+       C  T W   APEV   E Y  K DV+S+A++L E++    P+  K   +V ++    ER P  A  P K+ A     L+  CW  +P  RP+F +IL
Sbjct:  979 NLLVDDSWQVKVADFGLATVKSHTFAKTM-------CGTTGW--VAPEVLAEEGYTEKADVYSYAIVLWELLTRLIPYAGKNTMQVVRSIDRGERLPMPAWCPPKYAA-----LMNRCWETDPTHRPSFPEIL 1097          
BLAST of CX674932 vs. ExPASy Swiss-Prot
Match: Y0019_DICDI (Probable serine/threonine-protein kinase DDB_G0278521 OS=Dictyostelium discoideum GN=DDB_G0278521 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.845e-12
Identity = 47/135 (34.81%), Postives = 66/135 (48.89%), Query Frame = -1
Query:  455 NILRDDFGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTKHYAYGLRELIEDCWSEEPFRRPAFRQILMKLDHI 859
            NIL D  G  K+ADFG+S+   F N + +    +      R+ +PEV K ++Y  KVDVF F +IL EM     PF   ++          ERPP      H       LI+ CW + P  RP+F QIL  + ++
Sbjct:  682 NILIDRNGIAKIADFGISR---FKNDIGDKTMTSIGNP--RFRSPEVTKGQKYSEKVDVFGFGMILYEMFTRRVPFHDYEQIAASFKIANAERPPLPQTIDH---RWSNLIQICWDQNPNNRPSFDQILTIIQNL 808          
BLAST of CX674932 vs. ExPASy Swiss-Prot
Match: YR831_MIMIV (Putative serine/threonine-protein kinase/receptor R831 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R831 PE=4 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.716e-12
Identity = 43/144 (29.86%), Postives = 73/144 (50.69%), Query Frame = -1
Query:  434 PSNILRDDFGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTKHYAYGLRELIEDCWSEEPFRRPAFRQILMKLDHISDQLSIK 865
            P+NIL D+  ++K+ADFG ++       +KED        +  + APEV + E+Y  K DVFSF +++ E++ G  PF      +V    +   RP   +   H      +LI+ CW  +  +RP   +++ +L  I++Q   K
Sbjct: 1490 PANILVDEHFNVKIADFGFAR-------IKEDNTTMTRCGTPCWTAPEVIRGEKYCEKADVFSFGVVMWEVLTGKEPFAECNFMKVSLDILEGGRPIIPSDCPH---EFAKLIKKCWHAKAHKRPTMTEVVQQLMLITEQFDHK 1623          
BLAST of CX674932 vs. ExPASy Swiss-Prot
Match: SHKD_DICDI (Dual specificity protein kinase shkD OS=Dictyostelium discoideum GN=shkD PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.853e-12
Identity = 50/157 (31.85%), Postives = 79/157 (50.32%), Query Frame = -1
Query:  422 SNILRDDFGHLKVADFGLSKLLK---FANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANE--RPPFRAPTKHYAYGLRELIEDCWSEEPFRRPAFRQILMKLDHISDQLSI-----KRHWK 862
            +N+L D    +KV DFG S++ +   F +   +  P+        + APEV     Y+ K DV+SF +IL E++    P+   ++ ++    I NE  RPP  A T      LR LI+ CW   P  RP+F +IL +L+ I    +I     +++WK
Sbjct:  404 ANLLVDINLRVKVTDFGFSQIKEGEEFQDKAAKGTPL--------WMAPEVMMGNPYNEKADVYSFGIILWEILTKEAPYSHHKDYDIFFNAICNEKERPPIPADTLP---SLRHLIQTCWDHNPQNRPSFSEILFRLNEILIDCAIDFDDGRKYWK 549          
BLAST of CX674932 vs. ExPASy Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.853e-12
Identity = 48/135 (35.56%), Postives = 68/135 (50.37%), Query Frame = -1
Query:  461 SNILRDDFGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYI-ANERPPFRAPTKHYAYGLRELIEDCWSEEPFRRPAFRQILMKLD 862
            +N+L +D   +KVADFG S L       K +        ++R+ APE+ K + Y  KVDV+SF ++L E+     PF      +   A    NERPP  A  +     L  LI+ CWSE P +RP F  I+  L+
Sbjct:  216 NNLLLNDEMRVKVADFGTSCLETQCREAKGNMG------TYRWMAPEMIKEKPYTRKVDVYSFGIVLWELTTALLPFQGMTPVQAAFAVAEKNERPPLPASCQP---ALAHLIKRCWSENPSKRPDFSNIVAVLE 341          
BLAST of CX674932 vs. ExPASy Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=4 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.339e-12
Identity = 41/135 (30.37%), Postives = 70/135 (51.85%), Query Frame = -1
Query:  461 PSNILRDDFGHLKVADFGLSKLLKFANTVKEDRPVTCEETSWRYAAPEVYKNEEYDTKVDVFSFALILQEMIEGCPPFPTKQEKEVPKAYIANERPPFRAPTKHYAYGLRELIEDCWSEEPFRRPAFRQILMKLD 865
            PSNIL DD  ++K+ADFG ++       +KE+  V     +  + APE+ + E+Y  KVDVFSF +++ E++    PF      +V    +   RP   +          +L++ CW  +P +RP+   ++M L+
Sbjct: 1518 PSNILVDDSMNVKIADFGFAR-------IKEENSVMTRCGTPCWTAPEIIRGEKYTEKVDVFSFGIVMWEVLTCKEPFSGCNFMKVSMDILEGARPQIPSDC---PIDFTKLMKQCWHAKPDKRPSMEDVIMGLN 1642          
The following BLAST results are available for this feature:
BLAST of CX674932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
SHKC_DICDI1.365e-1434.78Dual specificity protein kinase shkC OS=Dictyostel... [more]
PYK3_DICDI1.155e-1337.31Dual specificity protein kinase pyk3 OS=Dictyostel... [more]
LIMKA_DICDI2.574e-1330.61Probable LIM domain-containing serine/threonine-pr... [more]
LIMKB_DICDI5.733e-1329.93Probable LIM domain-containing serine/threonine-pr... [more]
DRKD_DICDI9.779e-1337.59Probable serine/threonine-protein kinase drkD OS=D... [more]
Y0019_DICDI2.845e-1234.81Probable serine/threonine-protein kinase DDB_G0278... [more]
YR831_MIMIV3.716e-1229.86Putative serine/threonine-protein kinase/receptor ... [more]
SHKD_DICDI4.853e-1231.85Dual specificity protein kinase shkD OS=Dictyostel... [more]
HT1_ARATH4.853e-1235.56Serine/threonine-protein kinase HT1 OS=Arabidopsis... [more]
YR818_MIMIV6.339e-1230.37Putative serine/threonine-protein kinase/receptor ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9E11_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9E11-I21-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674932 ID=CX674932; Name=CX674932; organism=Citrus sinensis; type=EST; length=865bp
TTTTTTTTTTTTTTTTTGTAAACTTCAATTTCATAGATGGAAAAGATTAA
CGGAGAAAGGAGGGAGGGAATGTAACAACAATTCATAGTTCTTTCTTTAT
TTTTTAATTACCTTGTCAGGTCCTTTCAATTTTCTCTACATCTTATTTCA
AGAGCATGAAGGGAAGAGATGAACTCAAAATACAGGATGAGACAGGCCTG
ACAACTCAAACAAGATTCTGGCAAAAACAATTAATATGAACTCATCAGTA
AAACCAGCCATAAAAAGCTCCAGATTTCCGGGTAGTAAGGAACTGAAATT
ATGCACGTGCCAATGCAATAGTTACTCATCTGTTTGTAGAGCGAGATGAA
CGGCTGCTTGGATCTGCATGACCTTTCTTCCACAAGGCTGCAAGACTCTG
GAAACATCTTAGCGGACCAACCTTCCAGTGTCTCTTAATAGAAAGCTGGT
CACTTATGTGATCCAACTTCATAAGTATTTGCCTGAATGCTGGTCTCCTG
AATGGCTCCTCACTCCAGCAATCCTCAATTAACTCTCTTAATCCATAAGC
GTAATGCTTTGTCGGAGCTCTAAATGGTGGCCGCTCATTCGCTATGTATG
CTTTAGGAACTTCTTTTTCTTGCTTTGTGGGAAATGGTGGACAACCTTCA
ATCATCTCTTGTAAGATCAAAGCAAATGAAAACACATCCACTTTAGTGTC
ATATTCTTCATTTTTGTAAACCTCGGGGGCTGCATATCTCCAGGAAGTTT
CCTCGCATGTCACAGGTCTGTCTTCCTTTACTGTATTTGCAAATTTCAGT
AGCTTGCTGAGTCCAAAGTCTGCAACTTTCAGATGCCCAAAATCATCCCG
CAGTATATTTGAAGG
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