EY665736

Overview
NameEY665736
Unique NameEY665736
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG20_ARATH (Probable cyclic nucleotide-gated ion channel 20, chloroplastic OS=Arabidopsis thaliana GN=CNGC20 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.664e-63
Identity = 135/257 (52.53%), Postives = 167/257 (64.98%), Query Frame = 1
Query:   37 GAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCKKLLDCGNGGAEYSQDQTRKSWRGNPNASNCFEKDKFSYGIYEQAVKLTAEN----KYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSK 795
            GAG+LV HPKKIAL+YL+G FF+DLF+                 GASGANYAKNLLRAA+L QYIP+LY+ LP  AGQ+ TGFIFESAWANF INL TF L+GH+VGS WYLFGLQRVNQCLR+AC N   ++C+ L+DCGNG    S    R +W+ N +A+ CF++D F YGIY +AV LT  +    +Y + +     F GFQQ     G N+ P  F  G  FFT+ I+ L LL+F  L   +  NF   L K
Sbjct:  276 GAGQLVSHPKKIALHYLKGKFFLDLFIVMPLPQILILWIIPAHLGASGANYAKNLLRAAVLFQYIPKLYRLLPFLAGQTPTGFIFESAWANFVINLLTFMLAGHVVGSCWYLFGLQRVNQCLRNACGNFG-RECQDLIDCGNGN---SSVLVRATWKDNASANACFQEDGFPYGIYLKAVNLTNHSNLFTRYSYSL-----FWGFQQISTLAG-NQVPSYFL-GEVFFTMGIIGLGLLLFALLIGNM-QNFLQALGK 520          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG19_ARATH (Putative cyclic nucleotide-gated ion channel 19 OS=Arabidopsis thaliana GN=CNGC19 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 5.196e-49
Identity = 111/253 (43.87%), Postives = 149/253 (58.89%), Query Frame = 1
Query:   37 GAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCKKLLDCGNGGAEYSQDQTRKSWRGNPNASNCFEKDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSK 795
            GAG+LVDHP+KIA +Y RG F +D+F+                 G       K +LRA +L QYIP+LY+ LPL AGQ+STGFIFESAWANF INL TF L+GH VGS WYL  LQRV +C+ +A  N S  + + L+DC  G   Y+    R  WR N + + CF+++ ++YGIY +AV LT E+ +  +      + GFQQ     G N +P  +  G  FFT+ I+ L LL+F  L   + HNF   L +
Sbjct:  242 GAGQLVDHPRKIARHYFRGKFLLDMFIVFPIPQIMILRIIPLHLGTRREESEKQILRATVLFQYIPKLYRLLPLLAGQTSTGFIFESAWANFVINLLTFMLAGHAVGSCWYLSALQRVKKCMLNA-WNISADERRNLIDCARG--SYASKSQRDLWRDNASVNACFQENGYTYGIYLKAVNLTNESSFFTRFS-YSLYWGFQQISTLAG-NLSPS-YSVGEVFFTMGIIGLGLLLFARLIGNM-HNFLQSLDR 487          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.334e-20
Identity = 73/258 (28.29%), Postives = 110/258 (42.64%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSST-GFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCKKLLDCGNGGAEYSQDQTRKSWRGNPNASNCFEKDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSEE 804
            FG G LV+  ++IA  YL  +F ID+                   G+S  N  KN+L+  +  QYIPR  +  PL+   + T G + E+AWA    NLF + L+ H+ G+ WYLF ++R   C + AC  ++     KLL C    A  +           PN +       F +GI+  A++               CF    QN  S G+N     + W    F + I    L++F FL   +     S  ++ EE
Sbjct:  167 FGRGVLVEDKREIAKRYLSSHFIIDILAVLPLPQMVILIIIPHMRGSSSLN-TKNMLKFIVFFQYIPRFIRIYPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVFGAFWYLFSIERETVCWKQACERNNPPCISKLLYCDPETAGGNAFLNESCPIQTPNTT------LFDFGIFLDALQSGVVESQDFPQKFFYCFWWGLQNLSSLGQNLKTSTYIW-EICFAVFISIAGLVLFSFLIGNMQTYLQSTTTRLEE 416          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.971e-20
Identity = 72/219 (32.88%), Postives = 102/219 (46.58%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQ-SSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSS--FQDCKKLLDCGNGGAEYSQDQTRKSWRGNPNA-SNCFEKD--KFSYGIYEQAV-KLTAENKYHHQICVIPCFGGFQQNPYSWGEN 669
            FG GELV  PK IA  YLR  F +DL +A                 +S +++  N L   +L+QYIPRLY   PL A    +TG +  +AWA    NL  + L+ HI+GS WYL  ++R   C +  CH  S   Q      DCG           R +W+      SNC   +  +F++GI+  A+ K    + +  +      FG   QN  S+G+N
Sbjct:  157 FGRGELVKDPKLIARRYLRSDFIVDL-IACLPLPQIVSWFILPSIRSSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEIIKATGVVTTTAWAGAAYNLLQYMLASHILGSAWYLLSIERQATCWKAECHKESVPLQCVTDFFDCGT-----LHRDDRNNWQNTTVVFSNCDPSNNIQFTFGIFADALTKNVVSSPFLEKYLYCLWFG--LQNLSSYGQN 367          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.644e-20
Identity = 82/266 (30.83%), Postives = 116/266 (43.61%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQ-SSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCK-KLLDCGNGGAEYSQDQTRKSWRGNPNASN-CFEKDKF-SYGIYEQAVKLTAE-----NKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFLHEKINHNFPSPLSKSEE 804
            FG GELV   +KIA  YL   F+I L  A                G+   N  KN+LR  I+ QY+PR++   PL      +TG + E+AWA    NL  + L+ H++G+ WYL  ++R   C R AC N   Q C+ +  +C        +D  R SW    N +  C    KF  +GI+  AV  T       NKY +      C     +N  S G+N     +  G   F + I  L L++F  L   +     S   + EE
Sbjct:  150 FGRGELVIDSRKIAWRYLHKSFWIHLVAALPLPQVLIWIIIPNLRGSPMTN-TKNVLRFIIIFQYVPRMFLIFPLSRQIIKATGVVTETAWAGAAYNLMLYMLASHVLGACWYLLAVERQEACWRHAC-NIEKQICQYRFFEC-----RRLEDPQRNSWFEWSNITTICKPASKFYEFGIFGDAVTSTVTSSKFINKYFY------CLWWGLKNLSSLGQNLATSTYA-GEILFAIIIATLGLVLFALLIGNMQTYLQSTTMRLEE 401          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 67/184 (36.41%), Postives = 86/184 (46.74%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIF-ESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDCKKLLDCGNGGAE-YSQDQTRKSWRGNPNAS-NCFEKDKFSYGIYEQAV 576
            FG GELV  P +IA  YL+ YF ID                    GAS     K  LR+ IL+QYIPR  +  PL +    T  +F E+AWA     L  + L+ HIVG+ WYL  L+R N C    C NSS    +  L CGN   + Y+   T K      N   N  +   F +GIY +A+
Sbjct:  186 FGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQIVVWRFLYISKGAS-VLATKRALRSIILVQYIPRFIRLYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGAIWYLLALERYNGCWTKVCSNSSLDCHRNFLFCGNEKMDGYAAWTTIKDSVLQLNCPVNTTDNPPFDFGIYLRAL 368          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 2.515e-19
Identity = 75/248 (30.24%), Postives = 112/248 (45.16%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIF-ESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACH-NSSFQDCKKLLDCGNGGAEYSQDQTRKS----WRGNPNASNCFEKDKFSYGIYEQAVK--LTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFL 753
            FG GELV  P KIA  YL  YF +D F+A                  +     K  L   ++ QYIPR  +F+PL +    T   F E AWA     L  + L+ HI G+ WY+  ++R + CLR AC      + C ++L CG+      +    KS    ++ N +A +  ++ KF+YGIY QAV   + +   +  + C   C     QN  + G+      +  G   F++ I    LL+F  L
Sbjct:  180 FGRGELVIDPAKIAERYLTRYFIVD-FLAVLPLPQIAVWKFLHGSKGTDVLPTKQALLHIVITQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAAYYLLWYMLASHITGAFWYMLSVERNDTCLRSACKVQPDPKVCVQILYCGSKLMSSRETDWIKSVPDLFKNNCSAKS--DESKFNYGIYSQAVSSGIVSSTTFFSKFCY--CLWWGLQNLSTLGQGLQTSTYP-GEVLFSIAIAVAGLLLFALL 421          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.290e-19
Identity = 77/246 (31.30%), Postives = 111/246 (45.12%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIF-ESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQDC-KKLLDCGNGGAE--YSQDQTRKSWRGNPNASNCFEKDK--FSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFL 753
            FG GELV  P +IA  YL+ YF IDL                   GA+     K  LR  +L+QYIPR  +  PL +    T  +F E+AWA     L  + L+ HIVG+ WYL  L+R N C   ACHN+  Q+C +  L CGN   +   + D  + S+       N  E ++  F +GIY +A+     +  +       C     QN  + G+      +  G   F++ +    LL+F  L
Sbjct:  186 FGRGELVIDPAQIAKRYLQQYFIIDLLSVLPVPQIIVWRFLYTSRGAN-VLATKQALRYIVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGALWYLLALERNNDCWSKACHNN--QNCTRNFLFCGNQNMKGYAAWDNIKVSYLQLKCPVNVPEDEEPPFDFGIYLRALSSGIVSSKNFVSKYFFCLWWGLQNLSTLGQGLETSTYP-GEVIFSITLAIAGLLLFALL 427          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.632e-18
Identity = 74/246 (30.08%), Postives = 107/246 (43.50%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAGQSSTGFIF-ESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACH-NSSFQDCKKLLDCGNGGAEYSQDQTRKSWRG--NPNASNCFEKDKFSYGIYEQAVK--LTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFL 753
            FG GELV  P KIA  YL  YF +D F+A                  S     K  L   +++QYIPR  +F+PL +    T   F E AWA     L  + L+ HI G+ WY+  ++R + C R AC      + C ++L CG       + +  K+       N S   +  KF+YGIY QA+   + +   +  + C   C     QN  + G+      F  G   F++ I    LL+F  L
Sbjct:  174 FGRGELVIDPAKIAERYLTRYFVVD-FLAVLPLPQIAVWKFLHGSKGSDVLPTKTALLNIVIVQYIPRFVRFIPLTSELKKTAGAFAEGAWAGAAYYLLWYMLASHITGAFWYMLSVERNDTCWRFACKVQPDPRLCVQILYCGTKFVSSGETEWIKTVPELLKSNCSAKADDSKFNYGIYGQAISSGIVSSTTFFSKFCY--CLWWGLQNLSTLGQGLQTSTFP-GEVLFSIAIAIAGLLLFALL 415          
BLAST of EY665736 vs. ExPASy Swiss-Prot
Match: CNG17_ARATH (Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.743e-18
Identity = 69/248 (27.82%), Postives = 113/248 (45.56%), Query Frame = 1
Query:   34 FGAGELVDHPKKIALNYLRGYFFIDLFVAXXXXXXXXXXXXXXXXGASGANYAKNLLRAAILLQYIPRLYKFLPLFAG-QSSTGFIFESAWANFFINLFTFTLSGHIVGSGWYLFGLQRVNQCLRDACHNSSFQ-DCK-KLLDCGNGGAEYSQDQTRKSWRGNPNASNCFE-----KDKFSYGIYEQAVKLTAENKYHHQICVIPCFGGFQQNPYSWGENKTPQLFCWGNHFFTLPILELTLLVFCFL 753
            FG GELV  PK IA  Y++  F IDL +A                 +   ++  N +   +LLQYIPR Y  +PL +    +TG + ++AWA    NL  + L+ H++G+ WY+  + R   C +  C+  + Q +C+   LDC     +   D  + +W    N +  F+       +F YGI+  A+     +    +      + G QQ   S+G+N +  +F  G   F + I    L++F  L
Sbjct:  158 FGRGELVMDPKAIAWRYIKSDFIIDL-IATLPLPQIVIWFVISTTKSYRFDHNNNAIALIVLLQYIPRFYLIIPLSSQIVKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYILSVDRYTSCWKSRCNGEAGQVNCQLYYLDC-----DSMYDNNQMTW---ANVTKVFKLCDARNGEFKYGIFGNAITKNVVSSQFFERYFYCLWWGLQQLS-SYGQNLSTTMF-MGETTFAVLIAIFGLVLFAHL 394          
The following BLAST results are available for this feature:
BLAST of EY665736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
CNG20_ARATH1.664e-6352.53Probable cyclic nucleotide-gated ion channel 20, c... [more]
CNG19_ARATH5.196e-4943.87Putative cyclic nucleotide-gated ion channel 19 OS... [more]
CNGC1_ARATH1.334e-2028.29Cyclic nucleotide-gated ion channel 1 OS=Arabidops... [more]
CNG14_ARATH2.971e-2032.88Probable cyclic nucleotide-gated ion channel 14 OS... [more]
CNG15_ARATH8.644e-2030.83Putative cyclic nucleotide-gated ion channel 15 OS... [more]
CNGC9_ARATH1.926e-1936.41Putative cyclic nucleotide-gated ion channel 9 OS=... [more]
CNGC8_ARATH2.515e-1930.24Putative cyclic nucleotide-gated ion channel 8 OS=... [more]
CNGC6_ARATH4.290e-1931.30Probable cyclic nucleotide-gated ion channel 6 OS=... [more]
CNGC7_ARATH3.632e-1830.08Putative cyclic nucleotide-gated ion channel 7 OS=... [more]
CNG17_ARATH4.743e-1827.82Probable cyclic nucleotide-gated ion channel 17 OS... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-A06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665736 ID=EY665736; Name=EY665736; organism=Citrus sinensis; type=EST; length=888bp
CCACGCGTCCGGTGGCTCCTGAGTCTAGGCCCGTTTGGTGCTGGGGAGTT
AGTTGACCATCCAAAGAAAATCGCTCTGAATTACCTCCGTGGATACTTTT
TTATCGACTTATTTGTTGCATTACCACTTCCGCAAATCATAATCTTGTTA
GTGCTACCCAATATCTTGGGAGCATCTGGCGCAAATTATGCCAAAAATCT
CTTACGTGCTGCTATTCTTCTTCAGTACATTCCCAGGCTGTATAAGTTTC
TACCCCTGTTTGCCGGTCAGTCATCGACTGGCTTCATATTTGAGTCTGCC
TGGGCAAATTTTTTTATTAATCTTTTCACCTTCACATTATCTGGTCACAT
TGTTGGGTCAGGCTGGTACCTCTTCGGGTTACAGAGGGTTAATCAATGTC
TTCGAGATGCCTGCCACAATTCTTCATTCCAAGATTGCAAGAAACTCTTA
GATTGCGGGAATGGTGGTGCAGAATATAGTCAAGATCAAACACGGAAGAG
CTGGAGAGGCAATCCAAATGCTAGTAATTGTTTTGAGAAGGATAAATTTT
CTTATGGAATTTATGAACAAGCTGTCAAACTTACTGCAGAAAATAAGTAT
CATCACCAAATATGTGTAATTCCCTGTTTTGGGGGATTCCAGCAAAATCC
ATACTCTTGGGGGGAAAATAAAACCCCCCAACTATTTTGTTGGGGAAATC
ACTTTTTTACCTTGCCCATATTGGAACTAACCCTCCTTGTCTTTTGCTTT
CTTCATGAGAAAATAAACCACAATTTTCCCTCACCTCTATCAAAAAGCGA
GGAGCGCCTCTTTTCTACGCCCCCTGCCTCGCGCGACCCAGCAATCTAAT
ATCGTATCTTTTTACCCGAACCAAAGAGAAAAACGAAA
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