CX674922

Overview
NameCX674922
Unique NameCX674922
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX674922_ssr58 microsatellite CX674922_ssr58:58..69. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CX674922 vs. ExPASy Swiss-Prot
Match: SUBL_ARATH (Subtilisin-like protease OS=Arabidopsis thaliana GN=ARA12 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 4.075e-59
Identity = 122/252 (48.41%), Postives = 148/252 (58.73%), Query Frame = 1
Query:  124 TYIVHMKHQAKPSTFSTHYDWXXXXXXXXXXXXXXXXXXXXXAYDGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHTTRSPQFLGISSD----FGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTGCFGSDILAGIDRAI 867
            TYIVHM     PS+F  H +W                     A  GF+  L  ++A +L     V+ V  +  Y LHTTR+P FLG+       F  +  YS         DV++GVLDTGVWPESKS+ D     +P+ W+G CE+G +F+  LCN+KLIGARFF++GY    G   +   E  SPRD DGHGTHT+STAAG  V  ASLLGYASG ARGMA  ARVA YKVCW  GCF SDILA ID+AI
Sbjct:   31 TYIVHMAKSQMPSSFDLHSNWYDSSLRSISDSAELLYTYEN-AIHGFSTRLTQEEADSLMTQPGVISVLPEHRYELHTTRTPLFLGLDEHTADLFPEAGSYS---------DVVVGVLDTGVWPESKSYSDEGFGPIPSSWKGGCEAGTNFTASLCNRKLIGARFFARGYESTMGPIDES-KESRSPRDDDGHGTHTSSTAAGSVVEGASLLGYASGTARGMAPRARVAVYKVCWLGGCFSSDILAAIDKAI 271          
BLAST of CX674922 vs. ExPASy Swiss-Prot
Match: CUCM1_CUCME (Cucumisin OS=Cucumis melo PE=1 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 1.233e-39
Identity = 95/251 (37.85%), Postives = 133/251 (52.99%), Query Frame = 1
Query:  118 KQTYIVHMKHQAK-PSTFSTHYDWXXXXXXXXXXXXXXXXXXXXXAYDGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHTTRSPQFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCWKTGCFGSDILAGIDRAI 867
            K  YIV+M  + + P +   H+                       +++GFA  L  ++A+ +   + V+ V+ + +  LHTTRS  FLG    F L+         +   ++++GVLDTG+WPES SFDD      P KW+G CE+  +F    CN+K+IGAR +  G  ++       P +   PRD +GHGTHTASTAAG  V+ A+L G   G ARG    AR+A YKVCW  GC  +DILA  D AI
Sbjct:   31 KNIYIVYMGRKLEDPDSAHLHHRAMLEQVVGSTFAPESVLHTYKRSFNGFAVKLTEEEAEKIASMEGVVSVFLNEMNELHTTRSWDFLG----FPLTVPRRS----QVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFR---CNRKIIGARSYHIGRPIS-------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAI 263          
BLAST of CX674922 vs. ExPASy Swiss-Prot
Match: XSP1_ARATH (Xylem serine proteinase 1 OS=Arabidopsis thaliana GN=XSP1 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 2.103e-39
Identity = 101/254 (39.76%), Postives = 137/254 (53.94%), Query Frame = 1
Query:  115 AKQTYIVHM--KHQAKPSTFSTHYDWXXXXXXXXXXXXXXXXXXXXXAYDGFAASLDPDQAQALRQSDAVLGVYEDTLYTLHTTRSPQFLGISSDFGLSAGYSKLDFDKASLDVIIGVLDTGVWPESKSFDDSAMPEVPTKWRGQCESGPDFSPKLCNKKLIGARFFSKGYHMAGGSFSKKPNEPESPRDYDGHGTHTASTAAGVPVANASLLGYASGVARGMATHARVATYKVCW-KTGCFGSDILAGIDRAI 867
            AK  YI+++  +      T  TH +                      A++ FAA L P +A+ + + + V+ V  +    LHTT+S  F+G+     L+A        KA  DVIIGVLDTG+ P+S+SF D  +   P KW+G C    +F+   CN K+IGA++F    ++  G       E  SP D DGHGTHT+ST AGV VANASL G A+G ARG    AR+A YKVCW ++GC   DILAG + AI
Sbjct:   34 AKDFYIIYLGDRPDNTEETIKTHINLLSSLNISQEEAKERKVYSYTKAFNAFAAKLSPHEAKKMMEMEEVVSVSRNQYRKLHTTKSWDFVGLP----LTAKRHL----KAERDVIIGVLDTGITPDSESFLDHGLGPPPAKWKGSCGPYKNFTG--CNNKIIGAKYFKHDGNVPAG-------EVRSPIDIDGHGTHTSSTVAGVLVANASLYGIANGTARGAVPSARLAMYKVCWARSGCADMDILAGFEAAI 270          
The following BLAST results are available for this feature:
BLAST of CX674922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
SUBL_ARATH4.075e-5948.41Subtilisin-like protease OS=Arabidopsis thaliana G... [more]
CUCM1_CUCME1.233e-3937.85Cucumisin OS=Cucumis melo PE=1 SV=1[more]
XSP1_ARATH2.103e-3939.76Xylem serine proteinase 1 OS=Arabidopsis thaliana ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_9E06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9E06-I11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674922 ID=CX674922; Name=CX674922; organism=Citrus sinensis; type=EST; length=868bp
TGTACTTTCAAACTTAAAAAAAAAAAGCTTCATTTTCTCAGCATTGCCAT
GGCGTCTTTCTTCTTCTTCACCGGACTTCTTCTCCTACCATGCTTGTCAC
TCTCAGTGACGGCGGCCAAGCAAACCTACATAGTTCACATGAAACACCAA
GCAAAGCCCTCAACTTTCTCCACCCACTACGATTGGTACGCATCGAGCGT
TCAGTCTCTCTCATCTTCCACAGATTCTCTTCTGTACACCTACAACACTG
CATACGACGGCTTCGCTGCCTCACTTGACCCAGATCAAGCCCAGGCTCTC
CGCCAATCCGACGCCGTTCTCGGAGTCTACGAGGACACTCTCTACACCCT
CCACACTACTCGGTCCCCTCAGTTCCTCGGCATAAGCTCTGACTTCGGCT
TGTCGGCGGGCTACAGCAAGCTCGACTTCGACAAGGCCTCCCTTGATGTT
ATCATTGGTGTTCTCGACACTGGGGTTTGGCCCGAGTCTAAAAGTTTCGA
TGACTCCGCCATGCCTGAGGTTCCAACCAAGTGGCGCGGCCAGTGCGAGT
CCGGTCCTGATTTTAGTCCCAAACTTTGTAACAAAAAGCTCATTGGCGCT
CGTTTTTTCTCCAAAGGCTACCACATGGCTGGTGGAAGTTTCTCTAAGAA
GCCAAACGAACCCGAGTCGCCTCGTGATTATGACGGACACGGTACTCACA
CGGCCAGTACGGCCGCCGGCGTACCCGTCGCCAATGCCAGTCTCCTCGGT
TACGCCAGCGGCGTCGCTCGTGGAATGGCCACGCACGCGCGTGTTGCCAC
CTACAAAGTTTGCTGGAAAACTGGATGTTTCGGATCCGACATTCTTGCGG
GCATAGATCGGGCCATTC
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