CN186207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_ARATH (Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 3.546e-58 Identity = 109/133 (81.95%), Postives = 119/133 (89.47%), Query Frame = -3 Query: 351 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHIYGLESNGRLTNLI 749 MQQIEA GRGVLVYLRGHEGRGIGLGHKLRAYNLQD GRDTVEANEELGLPVDSREYGIGAQ++RDLGVRTMKLMTNNP+KYVGLKGYGLA+ GRVPL++ + KENKRYLE R KMGH+YGL+ G + I Sbjct: 405 MQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYGIGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLSLITKENKRYLETKRTKMGHMYGLKFKGDVVEKI 537
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_SALTO (Riboflavin biosynthesis protein ribBA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ribBA PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.655e-39 Identity = 79/122 (64.75%), Postives = 95/122 (77.87%), Query Frame = -3 Query: 384 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHIYG 749 M+ + GRGV++Y+RGHEGRGIGL HKLRAY LQD GRDTVEAN ELGLPVD+R+YG GAQ+L DLGVR+M+L+TNNP+K GL+GYGL V RV L EN+RYL R +MGH+ G Sbjct: 279 MELVAKEGRGVVLYIRGHEGRGIGLLHKLRAYQLQDKGRDTVEANLELGLPVDARDYGTGAQVLYDLGVRSMRLLTNNPAKRAGLEGYGLTVTERVALPVQSHPENERYLRTKRDRMGHLLG 400
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_SALAI (Riboflavin biosynthesis protein ribBA OS=Salinispora arenicola (strain CNS-205) GN=ribBA PE=3 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.121e-38 Identity = 76/120 (63.33%), Postives = 94/120 (78.33%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 + Q+ GRGV++Y+RGHEGRGIGL HKL+AY LQD GRDTV+AN +LGLP D+R+YG GAQ+L DLGVR+M+L+TNNP+K GL+GYGL VAGRV L EN RYL R +MGH+ Sbjct: 279 LDQVAREGRGVVLYVRGHEGRGIGLLHKLQAYQLQDTGRDTVDANLDLGLPADARDYGTGAQILYDLGVRSMRLLTNNPAKRAGLEGYGLTVAGRVELPVRPHPENVRYLRTKRDRMGHL 398
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_NOCFA (Riboflavin biosynthesis protein ribBA OS=Nocardia farcinica GN=ribBA PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.953e-38 Identity = 74/125 (59.20%), Postives = 97/125 (77.60%), Query Frame = -3 Query: 378 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGH-IYGLE 749 ++ ++ GRGV++Y+RGHEGRGIGL HKL+AY LQD GRDTV+AN +LGLP D+R+YG GAQ+L DLG+R+M+L+TNNP+K VGL GYGL + RVP+ EN RYL R +MGH + GL+ Sbjct: 281 LEMVDQEGRGVVLYMRGHEGRGIGLMHKLQAYQLQDSGRDTVDANLDLGLPADARDYGTGAQILVDLGIRSMRLLTNNPAKRVGLDGYGLTITERVPMPLRANAENLRYLRTKRDRMGHDLVGLD 405
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCPA (Riboflavin biosynthesis protein ribBA OS=Mycobacterium paratuberculosis GN=ribBA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.507e-37 Identity = 75/119 (63.03%), Postives = 91/119 (76.47%), Query Frame = -3 Query: 393 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGH 749 M + GRG+++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LGLP D+R+YGIGAQ+L DLGVR+M+L+TNNP+K VGL GYGL + RVPL EN RYL R KMGH Sbjct: 285 MAMVAREGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGEDTVDANLKLGLPADARDYGIGAQILVDLGVRSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRTNAENIRYLMTKRDKMGH 403
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCA9 (Riboflavin biosynthesis protein ribBA OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=ribBA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.687e-37 Identity = 72/119 (60.50%), Postives = 92/119 (77.31%), Query Frame = -3 Query: 393 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGH 749 M+ + GRG+++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LGLP D+R+YG+GAQ+L DLGV++M+L+TNNP+K VGL GYGL + RVPL EN RYL R +MGH Sbjct: 285 MEMVAKEGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGEDTVDANLKLGLPADARDYGLGAQILVDLGVKSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANSENIRYLRTKRDRMGH 403
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_PROVI (Riboflavin biosynthesis protein ribBA OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=ribBA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.004e-36 Identity = 80/120 (66.67%), Postives = 91/120 (75.83%), Query Frame = -3 Query: 390 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGHI 749 ++ IE GRGVLVYL EGRGIGL +KL+AYNLQDDG DTVEANEELG D R+YGIGAQ+L+DLGVR M+LMTNNP K VGL+GYGL + RVPL NK YLE R KMGH+ Sbjct: 282 LRMIEKEGRGVLVYLM-QEGRGIGLINKLKAYNLQDDGFDTVEANEELGFKADLRDYGIGAQILQDLGVRKMRLMTNNPKKVVGLEGYGLEIVERVPLEIEPNAVNKTYLETKRDKMGHM 400
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCA1 (Riboflavin biosynthesis protein ribBA OS=Mycobacterium avium (strain 104) GN=ribBA PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.311e-36 Identity = 74/119 (62.18%), Postives = 90/119 (75.63%), Query Frame = -3 Query: 393 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGH 749 M + GRG+++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LG P D+R+YGIGAQ+L DLGVR+M+L+TNNP+K VGL GYGL + RVPL EN RYL R KMGH Sbjct: 285 MAMVAREGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGEDTVDANLKLGFPADARDYGIGAQILVDLGVRSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDKMGH 403
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCMM (Riboflavin biosynthesis protein ribBA OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ribBA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.713e-36 Identity = 75/119 (63.03%), Postives = 91/119 (76.47%), Query Frame = -3 Query: 393 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGH 749 M + GRGV++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LGLP D+R+YGIGAQ+L DLGVR+M+L+TNNP+K VGL GYGL + RVPL EN RYL R +MGH Sbjct: 285 MAMVAREGRGVVLYMRGHEGRGIGLLHKLQAYQLQDAGDDTVDANLKLGLPADARDYGIGAQILVDLGVRSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDRMGH 403
BLAST of CN186207 vs. ExPASy Swiss-Prot
Match: RIBBA_MYCTU (Riboflavin biosynthesis protein ribBA OS=Mycobacterium tuberculosis GN=ribBA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.237e-36 Identity = 74/119 (62.18%), Postives = 91/119 (76.47%), Query Frame = -3 Query: 393 MQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPLKKENKRYLEPPRAKMGH 749 + + GRGV++Y+RGHEGRGIGL HKL+AY LQD G DTV+AN +LGLP D+R+YGIGAQ+L DLGVR+M+L+TNNP+K VGL GYGL + RVPL EN RYL R K+GH Sbjct: 285 LAMVAREGRGVVLYMRGHEGRGIGLMHKLQAYQLQDAGADTVDANLKLGLPADARDYGIGAQILVDLGVRSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANAENIRYLMTKRDKLGH 403 The following BLAST results are available for this feature:
BLAST of CN186207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186207 ID=CN186207; Name=CN186207; organism=Citrus sinensis; type=EST; length=751bpback to top |