CN186188

Overview
NameCN186188
Unique NameCN186188
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length744
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9649 contig Csv1_Contig9649:975..1718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_DICDI (Guanylate kinase OS=Dictyostelium discoideum GN=guk1 PE=3 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.287e-49
Identity = 96/180 (53.33%), Postives = 124/180 (68.89%), Query Frame = 1
Query:   43 PVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            P++ITGPSGVGKGTLI  L KE+   FG  VSHTTR PR  E +GVHYHFT+   M + IK+G F+E A+VHGN YGTS +A++ V+D  K CILDIDVQG  SV+ + +   FIFI PP+ E L+ERL  RGTE E+ + KRL  AK+E+      G FDH++ N+ L+  Y  LK ++
Sbjct:   11 PIIITGPSGVGKGTLIDKLRKEYEGSFGHIVSHTTRKPREGEINGVHYHFTDIPTMTEGIKNGDFIEHANVHGNFYGTSKKALKDVSDKNKICILDIDVQGCESVKKANIPCKFIFISPPTFETLQERLIGRGTENEETLKKRLETAKKEMVYRDIPGFFDHVIVNNVLDVAYGELKSII 190          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SCHPO (Guanylate kinase OS=Schizosaccharomyces pombe GN=SPBC1198.05 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 6.653e-49
Identity = 91/180 (50.56%), Postives = 126/180 (70.00%), Query Frame = 1
Query:   40 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKL 579
            KPVV+ GPSGVGK TL+  L+K+     GFSVSHTTR PRA EKDG+ YHF  +   +K + + KF+E+A   GN+YGTS+ A++ +    K+ ILDID+QG   V+ASP+DA ++F+ PPS+E+LE RLR RGTE E  IL+RL  A+ EIE  +  G FD ++ ND +E+ Y+ L+ +
Sbjct:   19 KPVVVFGPSGVGKSTLLKRLLKDHGDKLGFSVSHTTRTPRAGEKDGIDYHFVTKEEFQKLVAEEKFVEWAVFSGNMYGTSIMAIQELEAVNKKAILDIDLQGVLQVKASPIDAQYVFLAPPSIEQLEVRLRGRGTENESAILQRLERARAEIEYSEKPGNFDALIVNDDVEKAYKQLEAI 198          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_MOUSE (Guanylate kinase OS=Mus musculus GN=Guk1 PE=1 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.255e-47
Identity = 91/181 (50.28%), Postives = 126/181 (69.61%), Query Frame = 1
Query:   40 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +PVV++GPSG GK TL+  L +E  S+FGFSVSHTTR PR  E+DG  Y+F  R +M++ I  G F+E A   GNLYGTS EAV AV    + C+LD+D+QG RS++ + L  I+IF+ PPS++ LE+RLR R TETE+ + KRL  A+ ++E  K  G+FD ++ ND L++ Y  LK+ L
Sbjct:    5 RPVVLSGPSGAGKSTLLKKLFQEHSSIFGFSVSHTTRNPRPGEEDGKDYYFVTREMMQRDIAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAARTDMESSKEPGLFDLVIINDDLDKAYATLKQAL 185          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_PIG (Guanylate kinase OS=Sus scrofa GN=GUK1 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 4.768e-47
Identity = 91/181 (50.28%), Postives = 126/181 (69.61%), Query Frame = 1
Query:   40 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +PVV++GPSG GK TL+  L++E  S+FGFSVSHTTR PR  E++G  Y+F  R VM++ I  G F+E A   GNLYGTS  AV AV    + C+LD+D+QG R+++ + L  I+IF+ PPS++ LE+RLR R TETE+ + KRL  AK ++E  K  G+FD I+ ND L++ Y  LK+ L
Sbjct:    5 RPVVLSGPSGAGKSTLLKKLLQEHSSIFGFSVSHTTRDPRPGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNLYGTSKAAVRAVQAMNRICVLDVDLQGVRNIKKTDLQPIYIFVQPPSLDVLEQRLRQRNTETEESLAKRLAAAKADMESSKEPGLFDLIIINDSLDKAYWALKEAL 185          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_BOVIN (Guanylate kinase OS=Bos taurus GN=GUK1 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 2.366e-46
Identity = 90/181 (49.72%), Postives = 126/181 (69.61%), Query Frame = 1
Query:   40 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +PVV++GPSG GK TL+  L++E  S+FGFSVSHTTR PR  E++G  Y+F  R VM++ I  G F+E A   GNLYGTS  AV AV    + C+LD+D+QG R+++ + L  I+IF+ PPS++ LE+RLR R TETE+ + KRL  A+ ++E  K  G+FD I+ ND L++ Y  LK+ L
Sbjct:    5 RPVVLSGPSGAGKSTLLKKLLQEHGSIFGFSVSHTTRDPRPGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNLYGTSKAAVRAVQAMNRICVLDVDLQGVRNIKKTDLRPIYIFVQPPSLDVLEQRLRQRNTETEESLAKRLAAARADMESSKEPGLFDLIIVNDSLDKAYWALKEAL 185          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_HUMAN (Guanylate kinase OS=Homo sapiens GN=GUK1 PE=1 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 4.036e-46
Identity = 88/181 (48.62%), Postives = 126/181 (69.61%), Query Frame = 1
Query:   40 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +PVV++GPSG GK TL+  L++E   +FGFSVSHTTR PR  E++G  Y+F  R VM++ I  G F+E A   GNLYGTS  AV+AV    + C+LD+D+QG R+++A+ L  I+I + PPS+  LE+RLR R TETE+ ++KRL  A+ ++E  K  G+FD ++ ND L++ Y  LK+ L
Sbjct:    5 RPVVLSGPSGAGKSTLLKRLLQEHSGIFGFSVSHTTRNPRPGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNLYGTSKVAVQAVQAMNRICVLDVDLQGVRNIKATDLRPIYISVQPPSLHVLEQRLRQRNTETEESLVKRLAAAQADMESSKEPGLFDVVIINDSLDQAYAELKEAL 185          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_YEAST (Guanylate kinase OS=Saccharomyces cerevisiae GN=GUK1 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.449e-43
Identity = 88/184 (47.83%), Postives = 127/184 (69.02%), Query Frame = 1
Query:   34 VEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASP-LDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            + +P+VI+GPSG GK TL+  L  E+P  FGFSVS TTR PRA E +G  Y+F      +  IK+ +F+E+A   GN YG++V +V+ V+ +GK CILDID+QG +SV+A P L+A F+FI PPS+E+L++RL  RGTETE+ I KRL  A+ E+   + +G  D ++ ND L++ Y+ LK  +
Sbjct:    1 MSRPIVISGPSGTGKSTLLKKLFAEYPDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSMIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTETEESINKRLSAAQAELAYAE-TGAHDKVIVNDDLDKAYKELKDFI 183          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SYNS3 (Guanylate kinase OS=Synechococcus sp. (strain CC9311) GN=gmk PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 8.152e-39
Identity = 86/187 (45.99%), Postives = 121/187 (64.71%), Query Frame = 1
Query:   28 GNVEKPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLGL 588
            G++ +P V+TGPSGVGKGTL++ L +  P ++  SVS TTRAPR+ E DG+HY F  +    K ++ G  LE+A   GN YGT  E V      G   +L+I+++GAR VR S  +AI IF+ PPS+EELE+R+R RGTE E+ I +RL+ A+EE+E   +   FD ++ ND LE     L+K + L
Sbjct:    5 GSIARPTVLTGPSGVGKGTLVARLRERHPEIW-LSVSATTRAPRSGEIDGIHYFFHSKERFNKLVQSGGLLEWAEFAGNCYGTPREPVSERVANGIPVLLEIELEGARQVRKSLPEAIQIFLAPPSVEELEKRIRGRGTEAEEAIQRRLKRAQEELE---AQTEFDAVIVNDDLETALAELEKQMNL 187          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_SYNSC (Guanylate kinase OS=Synechococcus sp. (strain CC9605) GN=gmk PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.284e-38
Identity = 84/183 (45.90%), Postives = 119/183 (65.03%), Query Frame = 1
Query:   40 KPVVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLLGL 588
            K  +ITGPSGVGKGTL++ L++  P ++  SVS TTR+PR  E+DG++Y F  R+  E  ++ G FLE+A   GN YGT    VE    AG+  +L+I+++GAR VR S  D   IF+ PPS +ELE R+R RGT++ED I +RL  A+EE+E  +    FD ++ ND LE     ++ L+GL
Sbjct:    6 KLTLITGPSGVGKGTLVNQLLERHPQIW-LSVSATTRSPRQGEQDGINYFFHSRAGFEALVEQGGFLEWAEFAGNCYGTPRGPVEQQMAAGRPVLLEIELEGARQVRRSFPDGFQIFLAPPSFDELERRIRGRGTDSEDAIQRRLTRAREELEAQQE---FDAVVINDDLESALNQVETLMGL 184          
BLAST of CN186188 vs. ExPASy Swiss-Prot
Match: KGUA_LISIN (Guanylate kinase OS=Listeria innocua GN=gmk PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.700e-36
Identity = 79/179 (44.13%), Postives = 116/179 (64.80%), Query Frame = 1
Query:   46 VVITGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRAMEKDGVHYHFTERSVMEKAIKDGKFLEFASVHGNLYGTSVEAVEAVADAGKRCILDIDVQGARSVRASPLDAIFIFICPPSMEELEERLRARGTETEDQILKRLRNAKEEIEQGKSSGIFDHILYNDKLEECYENLKKLL 582
            +V++GPSGVGKGT+   + K+  + F +S+S TTR PR  E+DGV Y+F  R V E+AIKDGK LE+A   GN YGT +E VE    AG    L+I+VQGA  VR +  + IFIF+ PP + EL+ R+  RGTE+ + + +R+  AK+EIE   S   +D+ + ND + +  + +K ++
Sbjct:    8 IVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLPREGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGTPLEYVEEKLAAGIDIFLEIEVQGAMQVRKAMPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIEMMAS---YDYAVVNDVVSKAVQKIKGIV 183          
The following BLAST results are available for this feature:
BLAST of CN186188 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 385
Match NameE-valueIdentityDescription
KGUA_DICDI2.287e-4953.33Guanylate kinase OS=Dictyostelium discoideum GN=gu... [more]
KGUA_SCHPO6.653e-4950.56Guanylate kinase OS=Schizosaccharomyces pombe GN=S... [more]
KGUA_MOUSE1.255e-4750.28Guanylate kinase OS=Mus musculus GN=Guk1 PE=1 SV=2[more]
KGUA_PIG4.768e-4750.28Guanylate kinase OS=Sus scrofa GN=GUK1 PE=1 SV=2[more]
KGUA_BOVIN2.366e-4649.72Guanylate kinase OS=Bos taurus GN=GUK1 PE=1 SV=2[more]
KGUA_HUMAN4.036e-4648.62Guanylate kinase OS=Homo sapiens GN=GUK1 PE=1 SV=2[more]
KGUA_YEAST2.449e-4347.83Guanylate kinase OS=Saccharomyces cerevisiae GN=GU... [more]
KGUA_SYNS38.152e-3945.99Guanylate kinase OS=Synechococcus sp. (strain CC93... [more]
KGUA_SYNSC5.284e-3845.90Guanylate kinase OS=Synechococcus sp. (strain CC96... [more]
KGUA_LISIN1.700e-3644.13Guanylate kinase OS=Listeria innocua GN=gmk PE=3 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002I03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002I03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186188 ID=CN186188; Name=CN186188; organism=Citrus sinensis; type=EST; length=744bp
GTTGTTGCCTCGATTAAAGGTGTGATCGGCAATGTTGAGAAACCAGTTGT
TATTACTGGTCCTTCTGGAGTAGGCAAGGGTACATTGATATCAATGCTCA
TGAAGGAATTTCCATCCATGTTTGGATTCTCTGTGAGCCACACAACTCGT
GCCCCAAGGGCCATGGAGAAAGATGGGGTGCATTACCACTTTACCGAGCG
AAGTGTTATGGAGAAAGCAATAAAAGATGGTAAATTCCTTGAGTTTGCCT
CTGTTCATGGAAATCTTTATGGAACCAGCGTTGAAGCTGTGGAGGCGGTA
GCAGATGCTGGAAAGAGATGCATACTTGATATTGATGTTCAAGGGGCGAG
GTCTGTGAGGGCGAGTCCTCTTGATGCTATTTTCATATTTATCTGTCCAC
CTTCAATGGAGGAGCTTGAGGAGCGCCTCCGTGCAAGAGGAACTGAGACA
GAGGATCAGATCCTAAAACGACTCAGAAATGCCAAGGAAGAGATTGAGCA
AGGGAAATCCTCCGGCATCTTTGATCATATATTGTACAATGATAAACTTG
AAGAGTGTTACGAGAACCTTAAGAAACTCTTGGGACTTGATGGGAGTATT
GCTGCAACCCATCAAACCTCACCCAAAGGGATTGATTTGCCAGCTGATCA
TTCAGTATCAAAAGCTGATAACAAAGTCATCATAAAGTGTGGGGCTGCTG
AAGGAAAAACATCAAAGAACTTAATGGTTTTGGATGTATCCTCA
back to top