CX674903

Overview
NameCX674903
Unique NameCX674903
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length522
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:153..675. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674903 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.641e-19
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = -1
Query:  271 MLDTWGNWDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKWGPPCACVNCTCG 468
            M DT GN DCAD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CK GP C+C NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of CX674903 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.113e-15
Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = -1
Query:  268 LDTWGNWDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKWGPPCACVNCTCGS 465
            + T GN DC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CK G  CAC +C CG+
Sbjct:    1 MSTCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of CX674903 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.495e-14
Identity = 40/65 (61.54%), Postives = 44/65 (67.69%), Query Frame = -1
Query:  274 MLDTWGNWDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKWGPPCACVNCTC 468
            M D  GN DCAD SQCVKKG+S   D VETD S++  VV M V AAE+ G CK G  C CVNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of CX674903 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.207e-12
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = -1
Query:  271 NWDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKWGPPCACVNCTCG 450
            N DCAD +QCVKKG+SY    VET+   + TV V D  AAE +G CK G  C+CV+CTCG
Sbjct:    7 NCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of CX674903 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.177e-12
Identity = 33/59 (55.93%), Postives = 39/59 (66.10%), Query Frame = -1
Query:  274 NWDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKWGPPCACVNCTC 450
            N DC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCK GP CACV+C C
Sbjct:    7 NCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of CX674903 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11
Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = -1
Query:  271 MLDTWGNWDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKWGPPCACVNCTCG 468
            M D  GN DCAD+SQCVKKG+SY    VE + S        +V A E  G CK G  C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of CX674903 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.652e-11
Identity = 32/66 (48.48%), Postives = 38/66 (57.58%), Query Frame = -1
Query:  271 MLDTWGNWDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKWGPPCACVNCTCG 468
            M D  GN DCAD+SQCVKKG+SY    VE + S        +V A E  G CK G  C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
The following BLAST results are available for this feature:
BLAST of CX674903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MT3_CARPA4.641e-1963.64Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC3.113e-1554.55Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE4.495e-1461.54Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_MALDO4.207e-1256.67Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3_PRUAV7.177e-1255.93Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3A_ORYSJ4.652e-1148.48Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI4.652e-1148.48Metallothionein-like protein 3A OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_9D07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9D07-G13-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674903 ID=CX674903; Name=CX674903; organism=Citrus sinensis; type=EST; length=522bp
TTTTTTTTTTTTTTTTTAAACCACACAAGGCCACGGTCATGGCCATGGCC
ATATATTACATGATTATGAAAAAGGAAACACAAAACATTACGAGTGATGG
GTGACACAACACCCACATCACTCCCCACACTAGTAGTAAACCATCATAAA
AACGAAGTAAAAAATTTTTCTTTTTTTTTAATCCCCCTTACATTATTCTT
AACCCCCACAATATTTAGGCACACTTGCAGCTTCTTATTTTTTGCTGCAT
GTGTTTGCTTATTAGTGACTACCACAAGTGCAGTTCACACAAGCGCAGGG
GGGGCCCCACTTGCAGTTACCTTCAGTCTCAGCAGCCTGAACGTCCATGA
CAACAACGGTGCTGACAAAGCTCAAGTCAGTCTCGACAAAATCAGCAGCA
TAACTGCTTCCCTTCTTCACACACTGGCTCCTGTCAGCGCAGTCCCAGTT
GCCCCAGGTGTCCAACATGTTGATTGAGCTTAAAACTTGGAACTTAAAAC
TGGAAATAGAGGGCTCTTTATT
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