CN186174

Overview
NameCN186174
Unique NameCN186174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length712
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186174 vs. ExPASy Swiss-Prot
Match: KEG_ARATH (E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2)

HSP 1 Score: 420.239 bits (1079), Expect = 5.262e-117
Identity = 193/235 (82.13%), Postives = 212/235 (90.21%), Query Frame = 3
Query:    6 HCXXXXXXXXXXLRIGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLEEDGDVGIAFCFRSKPFCCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSKETPATVGKIVKIDMDGALNVKVAGRHSLWKVSPGDAERLSGFEVGDWVRSKPSIGTRPSYDWNTVGKESLAVVHS 710
            HC           RIGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEK++DFKVGDWVRVKASVSSPKYGWEDITRNSIG++HSL+EDGDVGIAFCFRSKPF CSVTDVEKV PF VGQEIH+ PS+TQPRLGWS ETPAT+GK+++IDMDG L+ +V GR +LW+VSPGDAE LSGFEVGDWVRSKPS+G RPSYDW+ VG+ES+AVVHS
Sbjct: 1041 HCEPEEVEPVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKIDDFKVGDWVRVKASVSSPKYGWEDITRNSIGVMHSLDEDGDVGIAFCFRSKPFSCSVTDVEKVTPFHVGQEIHMTPSITQPRLGWSNETPATIGKVMRIDMDGTLSAQVTGRQTLWRVSPGDAELLSGFEVGDWVRSKPSLGNRPSYDWSNVGRESIAVVHS 1275          

HSP 2 Score: 186.422 bits (472), Expect = 1.279e-46
Identity = 83/220 (37.73%), Postives = 134/220 (60.91%), Query Frame = 3
Query:   51 GDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLEEDGDVGIAFCFRSKPFCCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSKETPATVGKIVKIDMDGALNVKVAGRHSLWKVSPGDAERLSGFEVGDWVRSKPSIGTRPSYDWNTVGKESLAVVHS 710
            G  V ++  V EPR+ W G++  SVG +  ++ DG+L +  P     W+ADP++ME+VE+FKVGDWVR++ +++S K+G+  +   S+GI++ +  D  + +   +   P+ C   +VE V PF +G  + V  SV +PR  W  ET  +VGKI +I+ DG L +++  R   W+  P D E++  F+VGDWVR K S+ + P Y W  + + S+ V+HS
Sbjct:  930 GQHVRLRADVKEPRFGWRGQSRDSVGTVLCVDEDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRQNLTSAKHGFGSVVPGSMGIVYCVRPDSSLLVELSYLPNPWHCEPEEVEPVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKIDDFKVGDWVRVKASVSS-PKYGWEDITRNSIGVMHS 1148          

HSP 3 Score: 170.244 bits (430), Expect = 9.484e-42
Identity = 81/221 (36.65%), Postives = 121/221 (54.75%), Query Frame = 3
Query:   48 IGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSS-PKYGWEDITRNSIGIIHSLEEDGDVGIAFCFRSKPFCCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSKETPATVGKIVKIDMDGALNVKVAGRHSLWKVSPGDAERLSGFEVGDWVRSKPSIGTRPSYDWNTVGKESLAVVH 707
            +G  + +  S+ +PR  W  ET  ++GK+  I+ DG L  ++  R   W+  P D E +  F+VGDWVR K S+ + P Y W ++ R SI ++HS++E G + +A CFR   +    TD+EK+P  +VGQ +H    +T+PR GW    P + G I  +  DG + V   G   LW+  P D E    FEVG+WVR +  +       W +VG  S+ VVH
Sbjct: 1181 VGQEIHMTPSITQPRLGWSNETPATIGKVMRIDMDGTLSAQVTGRQTLWRVSPGDAELLSGFEVGDWVRSKPSLGNRPSYDWSNVGRESIAVVHSIQETGYLELACCFRKGRWSTHYTDLEKIPALKVGQFVHFQKGITEPRWGWRAAKPDSRGIITTVHADGEVRVAFFGLPGLWRGDPADLEVEPMFEVGEWVRLREGVSC-----WKSVGPGSVGVVH 1396          

HSP 4 Score: 154.066 bits (388), Expect = 7.033e-37
Identity = 72/186 (38.71%), Postives = 111/186 (59.68%), Query Frame = 3
Query:   42 LRIGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKVED--FKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLEEDGDVGIAFCFRSKPFCCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSKETPATVGKIVKIDMDGALNVKVAGRHSL-WKVSPGD 590
            L +G +  VK +V +PR+ W G +H SVG IS I+ DG L I  P     W  DPS++E +E+   K+GDWVRVKAS+++P Y W ++  +S G++H +E DGD+ ++FCF  + + C   ++E++ PF +G  + +   +  PR GW  ET A+ G +V +D +G L +K   R    W   P D
Sbjct: 1433 LVVGQKTRVKLAVKQPRFGWSGHSHGSVGTISAIDADGKLRIYTPAGSKTWMLDPSEVETIEEEELKIGDWVRVKASITTPTYQWGEVNPSSTGVVHRME-DGDLCVSFCFLDRLWLCKAGELERIRPFRIGDRVKIKDGLVTPRWGWGMETHASKGHVVGVDANGKLRIKFLWREGRPWIGDPAD 1617          

HSP 5 Score: 140.969 bits (354), Expect = 6.161e-33
Identity = 77/229 (33.62%), Postives = 116/229 (50.66%), Query Frame = 3
Query:   42 LRIGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSL-----EEDGDVGIAFCFRSKPFCCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSKETPATVGKIVKIDMDGALNVKVAGRHSLWKVSPGDAERLSGFE--VGDWVRSKPSIGTRPSYDWNTVGKESLAVVH 707
            L++G  V  ++ + EPR+ W      S G I+ +  DG + +     P  W+ DP+D+E    F+VG+WVR++  VS     W+ +   S+G++H +     E DG   ++FC   + +    + +EK     VGQ+  V  +V QPR GWS  +  +VG I  ID DG L +        W + P + E +   E  +GDWVR K SI T P+Y W  V   S  VVH
Sbjct: 1306 LKVGQFVHFQKGITEPRWGWRAAKPDSRGIITTVHADGEVRVAFFGLPGLWRGDPADLEVEPMFEVGEWVRLREGVSC----WKSVGPGSVGVVHGVGYEGDEWDGTTSVSFCGEQERWAGPTSHLEKAKKLVVGQKTRVKLAVKQPRFGWSGHSHGSVGTISAIDADGKLRIYTPAGSKTWMLDPSEVETIEEEELKIGDWVRVKASI-TTPTYQWGEVNPSSTGVVH 1529          

HSP 6 Score: 129.798 bits (325), Expect = 1.420e-29
Identity = 69/219 (31.51%), Postives = 118/219 (53.88%), Query Frame = 3
Query:   45 RIGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLEEDGDVGIAFCFRSKPFCCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSKETPATVGKIVKIDMDGALNVKVAGRHSLWKVSPGDAERLSGFEVGDWVRSKPSIGTRPSYDWN-----TVGK 686
            ++GD V +++++   ++ +G     S+G +  +  D  L++E+   P PW  +P ++E V  F++GD V VK SV+ P+Y W   T +S+G I  +E DG + I    R  P+    +D+EK+  F+VG  + V  SV+ P+ GW   T  ++G +  +D DG + +    R   +  S  D E+++ F VG  +   PSI T+P   W+     T+GK
Sbjct:  991 KVGDWVRIRQNLTSAKHGFGSVVPGSMGIVYCVRPDSSLLVELSYLPNPWHCEPEEVEPVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKIDDFKVGDWVRVKASVSSPKYGWEDITRNSIGVMHSLDEDGDVGIAFCFRSKPFSCSVTDVEKVTPFHVGQEIHMTPSI-TQPRLGWSNETPATIGK 1208          

HSP 7 Score: 105.916 bits (263), Expect = 2.197e-22
Identity = 52/159 (32.70%), Postives = 89/159 (55.97%), Query Frame = 3
Query:  231 FKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLEEDGDVGIAFCFRSKPFCCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSKETPATVGKIVKIDMDGALNVKVAGRHSLWKVSPGDAERLSGFEVGDWVRSKPSIGTRPSYDWNTVGKESLAVVH 707
            ++VGDWV+ K  +++P +GW+     S+G + ++ E  D+ IAFC  S        +V K+ P + GQ + +   V +PR GW  ++  +VG ++ +D DG L V   G    WK  P + ER+  F+VGDWVR + ++ T   + + +V   S+ +V+
Sbjct:  866 YEVGDWVKFKRGITTPLHGWQGAKPKSVGFVQTILEKEDMIIAFC--SGEARVLANEVVKLIPLDRGQHVRLRADVKEPRFGWRGQSRDSVGTVLCVDEDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRQNL-TSAKHGFGSVVPGSMGIVY 1021          

HSP 8 Score: 88.1965 bits (217), Expect = 4.740e-17
Identity = 55/187 (29.41%), Postives = 88/187 (47.06%), Query Frame = 3
Query:  117 HSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLEEDGDVGIAFCFRSKPFCCSVTDVEKVPPFE--VGQEIHVMPSVTQPRLGWSKETPATVGKIVKIDMDGALNVKVAGRHSLWKVSPGDAERLSGFEVGDWVRSKPSIGTRPSYDW 671
            H VG   + E DG   +        W    S +EK +   VG   RVK +V  P++GW   +  S+G I +++ DG + I     SK +    ++VE +   E  +G  + V  S+T P   W +  P++ G + +++ DG L V       LW    G+ ER+  F +GD V+ K  + T P + W
Sbjct: 1396 HGVGYEGD-EWDGTTSVSFCGEQERWAGPTSHLEKAKKLVVGQKTRVKLAVKQPRFGWSGHSHGSVGTISAIDADGKLRIYTPAGSKTWMLDPSEVETIEEEELKIGDWVRVKASITTPTYQWGEVNPSSTGVVHRME-DGDLCVSFCFLDRLWLCKAGELERIRPFRIGDRVKIKDGLVT-PRWGW 1579          
The following BLAST results are available for this feature:
BLAST of CN186174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
KEG_ARATH5.262e-11782.13E3 ubiquitin-protein ligase KEG OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0002H19_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002H19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186174 ID=CN186174; Name=CN186174; organism=Citrus sinensis; type=EST; length=712bp
GCGGTCATTGTGAACCAGAAGAGGTGGAGCCTGTTCCCCCTCTTAGGATT
GGCGACCGGGTATGTGTGAAGCGATCTGTTGCAGAACCTAGATATGCTTG
GGGTGGTGAGACCCATCATAGTGTTGGAAAGATCAGCGAGATAGAGAATG
ATGGTCTCCTAATAATTGAAATACCTAACCGACCTATACCATGGCAGGCT
GATCCTTCTGACATGGAAAAGGTTGAGGATTTCAAGGTTGGAGATTGGGT
AAGAGTGAAAGCGTCTGTGTCGTCCCCAAAATATGGATGGGAAGATATTA
CCCGAAACAGCATTGGGATAATTCATAGTTTGGAGGAAGATGGGGATGTG
GGCATCGCTTTCTGCTTTAGGAGCAAGCCCTTTTGTTGCTCTGTGACAGA
TGTGGAGAAGGTGCCTCCTTTTGAAGTGGGACAAGAGATTCACGTGATGC
CGTCTGTCACCCAGCCACGACTTGGATGGTCAAAGGAAACTCCTGCTACT
GTAGGAAAAATTGTGAAGATTGACATGGATGGGGCTTTGAATGTAAAAGT
TGCTGGCAGGCATAGCTTGTGGAAAGTTTCTCCTGGAGATGCTGAACGGC
TTTCAGGATTTGAAGTTGGTGATTGGGTACGTTCAAAACCAAGCATTGGT
ACCAGACCAAGTTATGACTGGAACACTGTTGGGAAGGAAAGTTTAGCTGT
TGTTCATAGTAT
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