EY665726

Overview
NameEY665726
Unique NameEY665726
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665726 vs. ExPASy Swiss-Prot
Match: CPRF2_PETCR (Light-inducible protein CPRF2 OS=Petroselinum crispum GN=CPRF2 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.313e-20
Identity = 47/76 (61.84%), Postives = 63/76 (82.89%), Query Frame = 1 
Query:  493 PIDLKRIRRMVSNRESARRSRKRKQAHMQELELQVERLKGENATLYKQFTDAAQQYKEANTNNRVLKSDVEALRAQ 720
            P D KR+RRM+SNRESARRSR+RKQAHM ELE QV +L+ EN++L K+ TD +Q+Y +A  +NRVLK+D+E +RA+
Sbjct:  196 PSDAKRVRRMLSNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQRYNDAAVDNRVLKADIETMRAK 271
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BLAST of EY665726 vs. ExPASy Swiss-Prot
Match: OP2_MAIZE (Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.821e-15
Identity = 42/99 (42.42%), Postives = 66/99 (66.67%), Query Frame = 1 
Query:  460 EAGPCEQSTDHPIDL--------KRIRRMVSNRESARRSRKRKQAHMQELELQVERLKGENATLYKQFTDAAQQYKEANTNNRVLKSDVEALRAQGEVG 732
            +  P ++  D  +++        +R+R+  SNRESARRSR RK AH++ELE QV +LK EN+ L ++     Q+Y +AN +NRVL++D+E LRA+ ++G
Sbjct:  204 DPSPSDEDMDGEVEILGFKMPTEERVRKKESNRESARRSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRADMETLRAKVKMG 302
The following BLAST results are available for this feature:
BLAST of EY665726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
CPRF2_PETCR2.313e-2061.84Light-inducible protein CPRF2 OS=Petroselinum cris... [more]
OP2_MAIZE3.821e-1542.42Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-092-H05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665726 ID=EY665726; Name=EY665726; organism=Citrus sinensis; type=EST; length=897bp
GCACTGCAGTACGGTCCGGATTCCGGGTCGACCACGCGTCCGAATTGACC
ATCCCTGGGGACAGTCTACTTATTACCCAACTATTTTTGAGAAATACCTC
CGTGGGTTCTGCACCGCGTCATTACGTTGAGACCAATCAAGCCCTGTCAT
TTGGATGATGAGGATATGGCGATGAAAGGAATAATATCGTCAAATACAGG
CACAGGGGGAGTGAGTGTGACGACAGGAAACCTTCACAAACGATGGTCTC
AATCTCAAAATCCCAATTCCAGTAAGCGTTCCACAATTGTTACTACCACC
ACCATTGATTCCCAGTCATCCATTTGTGGCAGTGTTACTGGAAATTGGTC
AGCTGCAACTCCAACGTCTGGTGATAAAACAAACACCATAGATTGTAAAG
CAAGACTAGCTTCAAGTGGTTCCTCCGCTGACCATTCTGATGACGAAGAC
CTGGAAATTGAAGCTGGTCCTTGTGAACAAAGCACTGACCATCCCATTGA
TTTAAAACGTATTCGAAGGATGGTCTCAAACCGGGAGTCTGCGAGGCGAT
CGAGGAAAAGAAAGCAAGCACATATGCAAGAGCTTGAATTACAGGTTGAG
CGACTGAAAGGAGAAAATGCTACTCTATACAAGCAATTTACAGATGCTGC
TCAACAGTATAAAGAGGCCAACACTAATAATAGAGTGCTAAAATCGGATG
TGGAAGCTCTTAGAGCCCAAGGTGAAGTTGGCTGAAGACGTAGTGTCCGG
AGGAATCCTAACCTGTGGACTGAACCAACTTCTTCAGAGGCATTTGAGTC
CAGTACTGCAACCAATCAATTCTATAATTACTAGTCCTAACATTAATAAT
AAATAATAAAAATATTGGGGCGGTCTTCAACTTTGGGAAAACGCCCC
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