CN186160

Overview
NameCN186160
Unique NameCN186160
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length625
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13718 contig Csv1_Contig13718:171..795. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 9.273e-85
Identity = 154/201 (76.62%), Postives = 167/201 (83.08%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            HRNE +SLLSRYVAQGKGILQPH LIDELDNI G+D    +L++GPF ++I SAQEAIVLPPFVAIAVRPRPGVWEYVRVNV+ELSVEQLSVSEYL FKEELV+   N+  +LELD EPFNA+FPRP RSSSIGNGVQFLNRHLSS+MFRNKDCLEPLLDFLR H YKGH LMLND             KAEDHLSKL PD
Sbjct:   24 HRNELISLLSRYVAQGKGILQPHNLIDELDNILGEDHATLDLKNGPFGQIINSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSVSEYLSFKEELVEGKSNDNIILELDLEPFNASFPRPTRSSSIGNGVQFLNRHLSSNMFRNKDCLEPLLDFLRVHTYKGHALMLNDRIQSISKLQSALVKAEDHLSKLAPD 224          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.818e-64
Identity = 122/164 (74.39%), Postives = 136/164 (82.93%), Query Frame = 1
Query:  133 GRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            G+Q L DGPFSEV++SAQEAIV+PPFVAIAVRPRPGVWEYVRVNV EL+VEQL+VSEYLHFKEELVD   ++ +VLELDFEPFN + PRP RSSSIGNGVQFLNRHLSSSMF NKDCLEPLLDFLR HK+KG ++MLND             KAED+L KLP D
Sbjct:    3 GKQILSDGPFSEVLRSAQEAIVVPPFVAIAVRPRPGVWEYVRVNVSELNVEQLTVSEYLHFKEELVDGKADDHYVLELDFEPFNESVPRPTRSSSIGNGVQFLNRHLSSSMFCNKDCLEPLLDFLRVHKHKGVVMMLNDRIQTIQRLQSALSKAEDYLIKLPAD 166          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS1_MAIZE (Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 9.023e-64
Identity = 119/201 (59.20%), Postives = 151/201 (75.12%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            H NE ++L SRYV QGKG+LQ H L+ E D +F  D+ +      PF +++++AQEAIVLPP+VA+A+RPRPGVW+Y+RVNV EL+VE+LSVSEYL FKE+LVD   N  FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F++K+ L PLL+FL+AH YKG  +MLND             KAE++L  +P D
Sbjct:   22 HPNELIALFSRYVHQGKGMLQRHQLLAEFDALFDSDKEKY----APFEDILRAAQEAIVLPPWVALAIRPRPGVWDYIRVNVSELAVEELSVSEYLAFKEQLVDGQSNSNFVLELDFEPFNASFPRPSMSKSIGNGVQFLNRHLSSKLFQDKESLYPLLNFLKAHNYKGTTMMLNDRIQSLRGLQSSLRKAEEYLLSVPQD 218          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUSY_SOYBN (Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 2.010e-63
Identity = 122/201 (60.70%), Postives = 148/201 (73.63%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            +RNE ++LLSR  A+GKGILQ H +I E + I   +E RQ L DG F EV++S QEAIVLPP+VA+AVRPRPGVWEY+RVNV+ L VE+L  +EYLHFKEELVD + N  FVLELDFEPFNA FPRP  + SIGNGVQFLNRHLS+ +F +K+ L PLL+FLR H  KG  LMLND             KAE++L  +PP+
Sbjct:   23 NRNEILALLSRIEAKGKGILQHHQVIAEFEEI--PEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEELQPAEYLHFKEELVDGSSNGNFVLELDFEPFNAAFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPE 221          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS2_MAIZE (Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.222e-62
Identity = 119/201 (59.20%), Postives = 149/201 (74.13%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            H NE V++ +R    GKG+LQPH +I E +N   + E R+ L+DG F +V+++AQEAIV+PP+VA+A+RPRPGVWEYVRVNV EL+VE+L V EYL FKE+LV+   N  FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F +K+ + PLL+FLRAH YKG  +MLND             KAE+HLS L  D
Sbjct:   27 HPNELVAVFTRLKNLGKGMLQPHQIIAEYNNAIPEAE-REKLKDGAFEDVLRAAQEAIVIPPWVALAIRPRPGVWEYVRVNVSELAVEELRVPEYLQFKEQLVEEGPNNNFVLELDFEPFNASFPRPSLSKSIGNGVQFLNRHLSSKLFHDKESMYPLLNFLRAHNYKGMTMMLNDRIRSLSALQGALRKAEEHLSTLQAD 226          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUS2_ORYSJ (Sucrose synthase 2 OS=Oryza sativa subsp. japonica GN=SUS2 PE=1 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 4.951e-62
Identity = 117/201 (58.21%), Postives = 150/201 (74.63%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            H NE ++L SRYV QGKG+LQ H L+ E D +   D+ +      PF +++++AQEAIVLPP+VA+A+RPRPGVW+Y+RVNV EL+VE+LSVSEYL FKE+LVD   N  FVLELDFEPFNA+FPRP+ S SIGNGVQFLNRHLSS +F++K+ L PLL+FL+AH +KG  +MLND             KAE++L  +P D
Sbjct:   22 HPNELIALFSRYVNQGKGMLQRHQLLAEFDALIEADKEKY----APFEDILRAAQEAIVLPPWVALAIRPRPGVWDYIRVNVSELAVEELSVSEYLAFKEQLVDGHTNSNFVLELDFEPFNASFPRPSMSKSIGNGVQFLNRHLSSKLFQDKESLYPLLNFLKAHNHKGTTMMLNDRIQSLRGLQSSLRKAEEYLMGIPQD 218          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUSY_ALNGL (Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 8.445e-62
Identity = 118/203 (58.13%), Postives = 151/203 (74.38%), Query Frame = 1
Query:   16 LGHRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            + +RNE V+LLSR + +GKGI + H LI E++ I   +  R+ L DG F EV++SAQEAIVLPP+VA+AVRPRPGVWEY+RVNV+ L VE+L V EYLHFKEELVD + N  FVLELDF+PFNA+FPRP  S SIGNGV+FLNRHLS+ +F +K+ + PLL+FLR H YKG  +MLND             KAE++L+ + P+
Sbjct:   21 VANRNEIVALLSRIIGKGKGICRNHQLIAEVEAI--PEATRKKLLDGAFGEVLRSAQEAIVLPPWVALAVRPRPGVWEYIRVNVHALVVEELRVPEYLHFKEELVDGSTNGNFVLELDFDPFNASFPRPTLSKSIGNGVEFLNRHLSAKLFHDKESMHPLLEFLRVHCYKGKNMMLNDRIQNVNALQYVLRKAEEYLTTIAPE 221          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUSY_VICFA (Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.441e-61
Identity = 120/201 (59.70%), Postives = 147/201 (73.13%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            +RNE ++LLSR  A+GKGILQ H +I E + I   +E RQ L DG F EV++S QEAIVLPP+VA+AVRPRPGVWEY+RVNV+ L VE L  +E+L FKEELVD + N  FVLELDFEPF A+FPRP  + SIGNGVQFLNRHLS+ +F +K+ L PLL+FLR H YKG  LMLND             KAE++LS + P+
Sbjct:   23 NRNEILALLSRIEAKGKGILQHHQVIAEFEEI--PEENRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVENLQPAEFLKFKEELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIQNPDSLQHVLRKAEEYLSTVDPE 221          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUSY_PHAAU (Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 5.474e-61
Identity = 119/201 (59.20%), Postives = 145/201 (72.14%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            +RNE ++LLSR   +GKGILQ H +I E + I   +E RQ L DG F EV++S QEAIVLPP+VA+AVRPRPGVWEY+RVNV+ L VE L  +EYL FKEELVD + N  FVLELDFEPF A+FPRP  + SIGNGVQFLNRHLS+ +F +K+ L PLL+FLR H  KG  LMLND             KAE++L  +PP+
Sbjct:   23 NRNEILALLSRIEGKGKGILQHHQVIAEFEEI--PEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGVWEYLRVNVHALVVEVLQPAEYLRFKEELVDGSSNGNFVLELDFEPFTASFPRPTLNKSIGNGVQFLNRHLSAKLFHDKESLHPLLEFLRLHSVKGKTLMLNDRIQNPDALQHVLRKAEEYLGTVPPE 221          
BLAST of CN186160 vs. ExPASy Swiss-Prot
Match: SUSY_MEDSA (Sucrose synthase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 5.474e-61
Identity = 118/201 (58.71%), Postives = 146/201 (72.64%), Query Frame = 1
Query:   22 HRNEXVSLLSRYVAQGKGILQPHVLIDELDNIFGDDEGRQNLRDGPFSEVIKSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVYELSVEQLSVSEYLHFKEELVDAAFNERFVLELDFEPFNATFPRPNRSSSIGNGVQFLNRHLSSSMFRNKDCLEPLLDFLRAHKYKGHLLMLNDXXXXXXXXXXXXXKAEDHLSKLPPD 624
            +RNE ++LLSR  A+GKGILQ H +I E + I   +E RQ L DG F EV++S QEAIVLPP+VA+AVRPRPG+WEY+RVNV+ L VE L  +E+L FKEELVD + N  FVLELDFEPF A+FPRP  + SIGNGV FLNRHLS+ +F +K+ L PLL+FLR H YKG  LMLND             KAE++LS + P+
Sbjct:   23 NRNEILALLSRLEAKGKGILQHHQVIAEFEEI--PEESRQKLTDGAFGEVLRSTQEAIVLPPWVALAVRPRPGIWEYLRVNVHALVVENLQPAEFLKFKEELVDGSANGNFVLELDFEPFTASFPRPTLNKSIGNGVHFLNRHLSAKLFHDKESLHPLLEFLRLHSYKGKTLMLNDRIQNPDSLQHVLRKAEEYLSTIDPE 221          
The following BLAST results are available for this feature:
BLAST of CN186160 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SUS2_PEA9.273e-8576.62Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUSY_BETVU1.818e-6474.39Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUS1_MAIZE9.023e-6459.20Sucrose synthase 1 OS=Zea mays GN=SH-1 PE=2 SV=1[more]
SUSY_SOYBN2.010e-6360.70Sucrose synthase OS=Glycine max GN=SS PE=1 SV=2[more]
SUS2_MAIZE2.222e-6259.20Sucrose synthase 2 OS=Zea mays GN=SUS1 PE=1 SV=1[more]
SUS2_ORYSJ4.951e-6258.21Sucrose synthase 2 OS=Oryza sativa subsp. japonica... [more]
SUSY_ALNGL8.445e-6258.13Sucrose synthase OS=Alnus glutinosa GN=SUS1 PE=2 S... [more]
SUSY_VICFA1.441e-6159.70Sucrose synthase OS=Vicia faba GN=SUCS PE=2 SV=1[more]
SUSY_PHAAU5.474e-6159.20Sucrose synthase OS=Phaseolus aureus GN=SS1 PE=1 S... [more]
SUSY_MEDSA5.474e-6158.71Sucrose synthase OS=Medicago sativa PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002H10_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186160 ID=CN186160; Name=CN186160; organism=Citrus sinensis; type=EST; length=625bp
TGGAGGAAACTCCACTTAGGGCATCGTAATGAANTCGTTTCTCTCCTCTC
CAGGTATGTGGCTCAAGGCAAAGGGATTTTGCAACCGCATGTACTGATCG
ACGAGCTTGATAACATTTTTGGCGACGATGAAGGTCGGCAGAACCTTCGG
GATGGTCCGTTTAGCGAAGTTATCAAATCTGCTCAGGAAGCGATAGTTCT
GCCTCCGTTTGTGGCTATAGCAGTCCGTCCAAGACCAGGTGTTTGGGAAT
ATGTCCGTGTTAATGTCTATGAACTTAGCGTGGAGCAACTAAGTGTTTCT
GAATACCTTCACTTCAAAGAAGAACTTGTAGATGCGGCGTTTAATGAAAG
ATTTGTGCTTGAGCTTGATTTTGAACCATTCAATGCAACTTTTCCTCGCC
CGAATCGGTCTTCATCAATTGGTAATGGGGTTCAGTTCCTCAACCGTCAC
CTTTCTTCAAGTATGTTCCGCAACAAAGACTGTTTGGAGCCCTTACTTGA
TTTCCTTCGAGCACACAAATATAAAGGGCATCTATTGATGTTGAATGATC
GGATTCAAAGCATTTCCCGGCTTCAGTCATCTCTGTCCAAGGCAGAGGAC
CATCTTTCCAAGCTTCCACCTGATA
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