CX674886

Overview
NameCX674886
Unique NameCX674886
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX674886_ssr133 microsatellite CX674886_ssr133:133..147. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig5079 contig Csv1_Contig5079:628..1417. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674886 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 3.247e-89
Identity = 165/244 (67.62%), Postives = 186/244 (76.23%), Query Frame = 2
Query:   59 FSAGGESDDFSGVPIQNXXXXXXXXXXXXXXXXXXXXXXXIAPRWVSRETRRLLSLPVPHIQADIIVSKDGTGTVTTIAEAIKKAPENSDRRTIIYVRAGRYEESNLKVGRKKRNLMFXXXXXXXXXXXXXRNVFDKLTTFHTASFAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITA 790
            FSA  + DDF+GVPIQN                         PRW+  + R +L +PV  IQADIIVSKDG GT  TI+EAIKKAP+NS RR IIYV+AGRYEE+NLKVGRKK NLMF             +++FD +TTFHTASFAATGAGFIARD+TFEN+AGPAKHQAVALR+GADHAV+YRCN+IGYQDTLYVHSNRQF+RECDIYGTVDFIFGNAAVVLQ C+IYARKPM  QKNTITA
Sbjct:  233 FSASHDGDDFAGVPIQNRRLLGVEEREEKF------------PRWMRPKEREILEMPVSQIQADIIVSKDGNGTCKTISEAIKKAPQNSTRRIIIYVKAGRYEENNLKVGRKKINLMFVGDGKGKTVISGGKSIFDNITTFHTASFAATGAGFIARDITFENWAGPAKHQAVALRIGADHAVIYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIFGNAAVVLQNCSIYARKPMDFQKNTITA 464          
BLAST of CX674886 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 1.012e-82
Identity = 157/240 (65.42%), Postives = 173/240 (72.08%), Query Frame = 2
Query:   71 GESDDFSGVPIQNXXXXXXXXXXXXXXXXXXXXXXXIAPRWVSRETRRLLSLPVPHIQADIIVSKDGTGTVTTIAEAIKKAPENSDRRTIIYVRAGRYEESNLKVGRKKRNLMFXXXXXXXXXXXXXRNVFDKLTTFHTASFAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITA 790
            G+  D SGVP+ N                         P W+ RE R LL  P   IQADI VSKDG+GT  TIAEAIKKAPE+S RR +IYV+AGRYEE NLKVGRKK NLMF             +++ D LTTFHTA+FAATGAGFI RDMTFEN+AGPAKHQAVALRVG DHAVVYRCN+IGYQD LYVHSNRQF+REC+IYGTVDFIFGNAAV+LQ C IYARKPMA QK TITA
Sbjct:  226 GKVKDLSGVPVVNNRKLLGTEETEEL------------PNWLKREDRELLGTPTSAIQADITVSKDGSGTFKTIAEAIKKAPEHSSRRFVIYVKAGRYEEENLKVGRKKTNLMFIGDGKGKTVITGGKSIADDLTTFHTATFAATGAGFIVRDMTFENYAGPAKHQAVALRVGGDHAVVYRCNIIGYQDALYVHSNRQFFRECEIYGTVDFIFGNAAVILQSCNIYARKPMAQQKITITA 453          
BLAST of CX674886 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 6.180e-56
Identity = 110/202 (54.46%), Postives = 145/202 (71.78%), Query Frame = 2
Query:  185 PRWVSRETRRLLSLPVPHIQADIIVSKDGTGTVTTIAEAIKKAPENSDRRTIIYVRAGRYEESNLKVGRKKRNLMFXXXXXXXXXXXXXRNVFDKLTTFHTASFAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITA 790
            P W+S   RRLL      ++AD  V+ DG+GT  T+A A+  APENS++R +I+++AG Y E N++V +KK+N+MF             RNV D  TTFH+A+ AA G  F+ARD+TF+N AGP+KHQAVALRVG+D +  Y C+++ YQDTLYVHSNRQF+ +C I GTVDFIFGNAAVVLQ C I+AR+P + QKN +TA
Sbjct:  262 PTWLSAGDRRLLQ--GSGVKADATVAADGSGTFKTVAAAVAAAPENSNKRYVIHIKAGVYRE-NVEVAKKKKNIMFMGDGRTRTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYNCDMLAYQDTLYVHSNRQFFVKCLIAGTVDFIFGNAAVVLQDCDIHARRPNSGQKNMVTA 460          
BLAST of CX674886 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.597e-54
Identity = 109/202 (53.96%), Postives = 142/202 (70.30%), Query Frame = 2
Query:  185 PRWVSRETRRLLSLPVPHIQADIIVSKDGTGTVTTIAEAIKKAPENSDRRTIIYVRAGRYEESNLKVGRKKRNLMFXXXXXXXXXXXXXRNVFDKLTTFHTASFAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITA 790
            P+W+S   RRLL      I+AD  V+ DG+G  TT+A A+  APE S++R +I+++AG Y E N++V +KK N+MF             RNV D  TTFH+A+ AA G  F+ARD+TF+N AGP+KHQAVALRVG+D +  Y+C++  YQDTLYVHSNRQF+ +C I GTVDFIFGNAA VLQ C I AR+P + QKN +TA
Sbjct:  257 PKWLSVGDRRLLQGST--IKADATVADDGSGDFTTVAAAVAAAPEKSNKRFVIHIKAGVYRE-NVEVTKKKTNIMFLGDGRGKTIITGSRNVVDGSTTFHSATVAAVGERFLARDITFQNTAGPSKHQAVALRVGSDFSAFYQCDMFAYQDTLYVHSNRQFFVKCHITGTVDFIFGNAAAVLQDCDINARRPNSGQKNMVTA 455          
BLAST of CX674886 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.425e-52
Identity = 105/202 (51.98%), Postives = 133/202 (65.84%), Query Frame = 2
Query:  185 PRWVSRETRRLLSLPVPHIQADIIVSKDGTGTVTTIAEAIKKAPENSDRRTIIYVRAGRYEESNLKVGRKKRNLMFXXXXXXXXXXXXXRNVFDKLTTFHTASFAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITA 790
            P WVS   R+L+      I A+ +V+KDGTG   T+AEA+  AP+ S  R +IYV+ G Y+E N++V  +K NLM               NV D  TTFH+A+ AA G GFI +D+  +N AGPAKHQAVALRVGAD +V+ RC +  YQDTLY HS RQFYR+  + GT+DFIFGNAAVV QKC + ARKP   Q+N +TA
Sbjct:  216 PSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGTYKE-NVEVSSRKMNLMIIGDGMYATIITGSLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCQLVARKPGKYQQNMVTA 416          
BLAST of CX674886 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.861e-52
Identity = 100/202 (49.50%), Postives = 136/202 (67.33%), Query Frame = 2
Query:  185 PRWVSRETRRLLSLPVPHIQADIIVSKDGTGTVTTIAEAIKKAPENSDRRTIIYVRAGRYEESNLKVGRKKRNLMFXXXXXXXXXXXXXRNVFDKLTTFHTASFAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITA 790
            P WVS   R LL  PV   + +++V+++GTG  TTI EAI  AP +S+ R +IY++ G Y E N+++ R+K  +MF             R+  D  T FH+A+    G+GFIA+D++F N+AGP KHQAVALR  +D +  YRC+   YQDT+YVHS++QFYRECDIYGTVDFIFG+A+VV Q C++YAR+P   QK   TA
Sbjct:  186 PMWVSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFE-NIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTA 386          
BLAST of CX674886 vs. ExPASy Swiss-Prot
Match: PME_ACTDE (Pectinesterase OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.174e-52
Identity = 101/187 (54.01%), Postives = 129/187 (68.98%), Query Frame = 2
Query:  230 VPHIQADIIVSKDGTGTVTTIAEAIKKAPENSDRRTIIYVRAGRYEESNLKVGRKKRNLMFXXXXXXXXXXXXXRNVFDKLTTFHTASFAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITA 790
            V  I  D++V+KDG+G  TT+  A+  A ++S  R +IY++ G Y E  + V +KK NLMF             R+V D  TTF +++ A  G GFIAR ++FEN+AGP+KHQAVALR GAD +  Y+C+ +GYQDTLYVHS RQFY ECD+YGT+DFIFGNAA VLQKC +YARKP   QKN  TA
Sbjct:    3 VTDIVPDVVVAKDGSGNFTTVGAAVAAAKDSSTARFVIYIKEGAYFEY-VDVDKKKTNLMFIGDGIGKTWIKGNRSVVDGWTTFRSSTVAVVGTGFIARGISFENYAGPSKHQAVALRSGADFSAFYQCSFVGYQDTLYVHSLRQFYSECDVYGTIDFIFGNAAAVLQKCNLYARKPNENQKNIFTA 188          
BLAST of CX674886 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 9.235e-52
Identity = 104/202 (51.49%), Postives = 135/202 (66.83%), Query Frame = 2
Query:  185 PRWVSRETRRLLSLPVPHIQADIIVSKDGTGTVTTIAEAIKKAPENSDRRTIIYVRAGRYEESNLKVGRKKRNLMFXXXXXXXXXXXXXRNVFDKLTTFHTASFAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITA 790
            P WV  + R+LL      +  D IV++DGTG  T + +A+  AP+ S RR +IY++ G Y+E N+++ +KK NLM              R+  D  TTF +A+FA +G GFIARD+TFEN AGP KHQAVALR  +D +V YRCN+ GYQDTLY H+ RQFYR+C I GTVDFIFG+A VV Q C I A+K +  QKN+ITA
Sbjct:  189 PSWVKTKDRKLLQ--ADGVSVDAIVAQDGTGNFTNVTDAVLAAPDYSMRRYVIYIKRGTYKE-NVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRGYQDTLYTHTMRQFYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITA 387          
BLAST of CX674886 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.206e-51
Identity = 104/202 (51.49%), Postives = 132/202 (65.35%), Query Frame = 2
Query:  185 PRWVSRETRRLLSLPVPHIQADIIVSKDGTGTVTTIAEAIKKAPENSDRRTIIYVRAGRYEESNLKVGRKKRNLMFXXXXXXXXXXXXXRNVFDKLTTFHTASFAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITA 790
            P WVS   R+L+      I A+ +V+KDGTG   T+AEA+  AP+ S  R +IYV+ G Y+E N++V  +K  LM               NV D  TTFH+A+ AA G GFI +D+  +N AGPAKHQAVALRVGAD +V+ RC +  YQDTLY HS RQFYR+  + GT+DFIFGNAAVV QKC + ARKP   Q+N +TA
Sbjct:  216 PSWVSSRDRKLMESSGKDIGANAVVAKDGTGKYRTLAEAVAAAPDKSKTRYVIYVKRGIYKE-NVEVSSRKMKLMIVGDGMHATIITGNLNVVDGSTTFHSATLAAVGKGFILQDICIQNTAGPAKHQAVALRVGADKSVINRCRIDAYQDTLYAHSQRQFYRDSYVTGTIDFIFGNAAVVFQKCKLVARKPGKYQQNMVTA 416          
BLAST of CX674886 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.509e-51
Identity = 103/202 (50.99%), Postives = 136/202 (67.33%), Query Frame = 2
Query:  185 PRWVSRETRRLLSLPVPHIQADIIVSKDGTGTVTTIAEAIKKAPENSDRRTIIYVRAGRYEESNLKVGRKKRNLMFXXXXXXXXXXXXXRNVFDKLTTFHTASFAATGAGFIARDMTFENFAGPAKHQAVALRVGADHAVVYRCNVIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQKCAIYARKPMAMQKNTITA 790
            P W+S   RRLL      +  +++V+ DG+G   T+A ++  AP+   +R II ++AG Y E N++V +K +N+MF             RNV D  TTF +A+ A  G GF+ARD+TF+N AGP+KHQAVALRVGAD +  Y C+++ YQDTLYVHSNRQF+  C I GTVDFIFGNAA VLQ C I+ARKP + QKN +TA
Sbjct:  254 PAWLSTGDRRLLQSS--SVTPNVVVAADGSGNFKTVAASVAAAPQGGTKRYIIRIKAGVYRE-NVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTA 452          
The following BLAST results are available for this feature:
BLAST of CX674886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 78
Match NameE-valueIdentityDescription
PME34_ARATH3.247e-8967.62Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME61_ARATH1.012e-8265.42Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_ARATH6.180e-5654.46Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME2_ARATH2.597e-5453.96Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME21_SOLLC1.425e-5251.98Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME40_ARATH1.861e-5249.50Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME_ACTDE3.174e-5254.01Pectinesterase OS=Actinidia deliciosa PE=1 SV=1[more]
PME_PRUPE9.235e-5251.49Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME22_SOLLC1.206e-5151.49Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME3_CITSI3.509e-5150.99Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_9C08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-9C08-E15-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674886 ID=CX674886; Name=CX674886; organism=Citrus sinensis; type=EST; length=790bp
CAGGTTTCGGACAAGTTGAAGGACTTGTCCGAATTGGTGAGCAATTGCTT
GGCGATTTTTTTCGGCGGGTGGCGAGAGCGACGACTTTTCGGGGGTGCCG
ATTCAGAACAGAAGGAGGAGGCTGTTGAGCTCGGAGGAGGAGGAGGACGA
TACCTGGGGAGAAAATGACGACGATGATATTGCGCCGAGATGGGTGAGTA
GGGAGACGAGAAGATTGTTGAGCTTGCCCGTGCCGCACATACAGGCCGAT
ATAATCGTGTCAAAGGACGGTACTGGGACTGTCACAACGATTGCGGAAGC
GATTAAAAAGGCTCCTGAGAACAGTGATCGTCGGACGATTATTTACGTGA
GGGCAGGAAGGTACGAAGAGAGTAATTTGAAGGTGGGGAGGAAGAAAAGG
AATTTGATGTTCATAGGAGACGGGAAGGGCAAAACAATAATAACAGGTGG
AAGAAATGTTTTCGACAAGTTGACGACATTCCACACCGCATCATTTGCGG
CGACTGGAGCTGGCTTTATCGCTCGGGACATGACGTTTGAGAACTTTGCG
GGACCGGCGAAGCACCAAGCGGTGGCCCTCCGGGTCGGCGCCGACCACGC
GGTGGTGTACCGCTGCAACGTAATCGGTTACCAAGACACCCTCTACGTGC
ACTCAAACCGGCAGTTCTACCGCGAGTGCGACATCTACGGCACCGTGGAC
TTCATCTTCGGGAACGCCGCCGTGGTCTTACAGAAGTGCGCCATCTACGC
TCGCAAGCCGATGGCCATGCAGAAGAACACCATCACGGCG
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