CX674862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674862 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 1.128e-47 Identity = 94/123 (76.42%), Postives = 109/123 (88.62%), Query Frame = -2 Query: 333 RRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSCCSR 701 R +TF+++ RWLDEL THSDTTVA+ML+GNKCDLESIR VS EEGKSLAE+EGLFFMETSALDSTNVK AFE+VIREIYSN+SRK LNSDSYK EL++NRV+LVK+E +G+K FSCCSR Sbjct: 96 RSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEELTVNRVSLVKNENEGTKT----FSCCSR 214
BLAST of CX674862 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.779e-46 Identity = 94/122 (77.05%), Postives = 107/122 (87.70%), Query Frame = -2 Query: 336 RRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSCCS 701 RRTTF+S+ RWLDELK HSDTTVARMLVGNKCDLE+IR VS EEGK+LAE EGLFF+ETSALDSTNVK AFE+VI +IY+NVSRK LNSD+YK EL++NRV+LVK + SKQ SS FSCCS Sbjct: 96 RRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDELTVNRVSLVKDDNSASKQ-SSGFSCCS 216
BLAST of CX674862 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23 Identity = 54/124 (43.55%), Postives = 82/124 (66.13%), Query Frame = -2 Query: 336 RRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLV--KSETDGSKQTSSYFSCCS 701 + TF+++ RWL EL+ H+D+ + MLVGNK DL+ +R+V TE ++ E EGL F+ETSAL+STNV+ AF+ ++ EIY VS+KVL+S+ + ++ R +V + DG K+ CCS Sbjct: 96 KSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNRPKIGEGRDVIVIDNAHDDGGKKKG---GCCS 216
BLAST of CX674862 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.143e-22 Identity = 49/90 (54.44%), Postives = 69/90 (76.67%), Query Frame = -2 Query: 432 RRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSD 701 +R TFD I RWL+EL+ H+D + +L+GNKCDL + R+V TE+ K AE EGLFF+ETSAL++TNV++AF V+ EIY+ V++K L +D Sbjct: 101 KRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAAD 190
BLAST of CX674862 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.235e-22 Identity = 48/120 (40.00%), Postives = 82/120 (68.33%), Query Frame = -2 Query: 336 TTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSCCS 695 TTF+++SRWL EL+ H+D+ + ML+GNK DL+ +R V+TE+ +S AE EGL F+ETSAL++ NV+ AF+ ++ E+Y +S+K ++SD A ++ + + + ++++ CCS Sbjct: 98 TTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISSDQTTANANIKEGQTI--DVAATSESNAKKPCCS 215
BLAST of CX674862 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21 Identity = 49/122 (40.16%), Postives = 80/122 (65.57%), Query Frame = -2 Query: 336 RRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSYFSCCS 701 +R TFD++ RWL EL+ H+D+ + M+ GNK DL+ +R VS E+G++LAE EGL F+ETSAL++ N++ AF+ ++ EIY +S+K L + + L T+ ++ +++ SCCS Sbjct: 96 KRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGTTINVADASANQRR----SCCS 213
BLAST of CX674862 vs. ExPASy Swiss-Prot
Match: RB11D_LOTJA (Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21 Identity = 56/125 (44.80%), Postives = 78/125 (62.40%), Query Frame = -2 Query: 336 RRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNRVTLVKSETDGSKQTSSY---FSCCS 701 RR TF++ +RWL EL+ H+D + ML+GNK DL + V TE+GKS AE E L+FMETSAL++TNV+NAF V+ +IY VS++ + + + L K +T K+ SS F CCS Sbjct: 97 RRATFENAARWLKELRDHTDPNIVVMLIGNKSDLRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSGSSSGLPS----KGQTINVKEDSSVLKRFGCCS 217
BLAST of CX674862 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21 Identity = 46/87 (52.87%), Postives = 68/87 (78.16%), Query Frame = -2 Query: 441 RRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVL 701 +R +FD++ RWL EL+ H+D+++ M+VGNK DL +R VS +EGK+LAE EGLFF+ETSA+++ NV+ AF+ +I E+Y V+RK L Sbjct: 96 KRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETSAMEAVNVEEAFQTIITEVYGIVNRKAL 182
BLAST of CX674862 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21 Identity = 56/123 (45.53%), Postives = 73/123 (59.35%), Query Frame = -2 Query: 336 RRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSLNR-VTLVKSETDGSKQTSSYFSCCS 701 R TF+++ RWL EL+ H+D + MLVGNK DL +R VSTE+ K+ AE E FFMETSAL+S NV+NAF V+ EIY V RK L A L + + + K + K+ CCS Sbjct: 98 RHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDPAALPKGQTINVGKDDVSAVKKV----GCCS 216
BLAST of CX674862 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21 Identity = 53/125 (42.40%), Postives = 80/125 (64.00%), Query Frame = -2 Query: 336 RRTTFDSISRWLDELKTHSDTTVARMLVGNKCDLESIRNVSTEEGKSLAEAEGLFFMETSALDSTNVKNAFEIVIREIYSNVSRKVLNSDSYKAELSL---NRVTLVKSETDGSKQTSSYFSCCS 701 +R TFD++ RWL EL+ H+D+ + M+ GNK DL +R+V+ E+G+SLAE EGL F+ETSAL++TNV+ AF+ ++ EIY +S+K L + A S T+ +T G + +CCS Sbjct: 96 KRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTINVDDTSGGAKR----ACCS 216 The following BLAST results are available for this feature:
BLAST of CX674862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 103
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674862 ID=CX674862; Name=CX674862; organism=Citrus sinensis; type=EST; length=702bpback to top |