CX674769

Overview
NameCX674769
Unique NameCX674769
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10867 contig Csv1_Contig10867:1081..1986. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674769 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.240e-21
Identity = 62/165 (37.58%), Postives = 90/165 (54.55%), Query Frame = -2
Query:  418 NKKVDTFYYVGLTGFSVGGQAVQIPPSLLXMDEA-GDGGIIVDCGTAITRLQTQAYNSLRDSFVRLAGNLKPTSGVAL-FDTCYDF-SGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSSALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 903
            + ++ TFYY+ L G SVG   + I PS   ++   G GGII+D GT +T     AY S+R  F+    NL   +G +  FD C+   S   ++++PT  +HF  G  L+LP++NY I   S G  C A   +S  +SI GN+QQQ   V +D  N+ V F   +C
Sbjct:  273 SSQIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQI-NLPVVNGSSSGFDLCFQTPSDPSNLQIPTFVMHFDGGD-LELPSENYFIS-PSNGLICLAMGSSSQGMSIFGNIQQQNMLVVYDTGNSVVSFASAQC 434          
BLAST of CX674769 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.802e-20
Identity = 61/162 (37.65%), Postives = 92/162 (56.79%), Query Frame = -2
Query:  418 TFYYVGLTGFSVGGQAVQIPPSLLXMDEAGDGGIIVDCGTAITRLQTQAYNSLRDSF---VRLAGNLKPTSGVALFDTCYDF-SGLRSVRVPTVSLHFGAGKALDLPAKNYLIPVDSAGTFCFAFAPTSS-ALSIIGNVQQQGTRVSFDLANNRVGFTPNKC 888
            T+YY+ L G +VGG  + IP S   + + G GG+I+D GT +T L   AYN++  +F   + L    + +SG++   TC+   S   +V+VP +S+ F  G  L+L  +N LI   + G  C A   +S   +SI GN+QQQ T+V +DL N  V F P +C
Sbjct:  279 TYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLS---TCFQQPSDGSTVQVPEISMQFDGG-VLNLGEQNILIS-PAEGVICLAMGSSSQLGISIFGNIQQQETQVLYDLQNLAVSFVPTQC 435          
The following BLAST results are available for this feature:
BLAST of CX674769 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR1.240e-2137.58Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR6.802e-2037.65Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_8F01_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-8F01-L2-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674769 ID=CX674769; Name=CX674769; organism=Citrus sinensis; type=EST; length=904bp
TTTTTTTTAACAACGTAGACGTATTTCATCATCTCAATTAAAACATACAG
AAGTGCCACAGCACAACAGAGTAATAATAGTGCAAAATAACGCAAACACT
ATAGACTACACTTGCCCTTCAGCTTAGATATAATTTACTATACATGCCAC
TCAACCGTGCGAGGACACGGATCTAATTTATGATTTGATTAATGACACGA
ACCACTCCAGCCAAAAGCTTGATGCAATTTATTGAGGTGGATCCCACTTT
CATCCACCACCAGTCAACAACGCTCCTTTAACGCAACATCTTTCAGTTCA
TTCTCCTAACAATTAAACGGGTATAAAAGTTTCTCCTAACAAATGGACAG
CTAACAGTTCCCTTTTTCTACCAATTACCAGGGGTAACAAGGTAATTATG
GGTTCCGAAAATGCCTAACACTTATTGGGAGTGAACCCGACGCGATTGTT
CGCCAAATCAAAACTGACACGTGTTCCCTGTTGCTGCACGTTGCCAATAA
TTGACAGAGCCGACGACGTTGGAGCGAATGCGAAACAGAAAGTCCCAGCT
GAGTCTACTGGAATCAAGTAATTTTTGGCGGGTAAATCAAGAGCTTTTCC
AGCACCGAAGTGAAGCGACACCGTTGGGACCCTAACACTCCTTAATCCGG
AGAAATCGTAGCACGTGTCGAATAAAGCGACCCCGCTGGTGGGTTTCAAG
TTACCCGCCAGCCTGACGAAAGAGTCGCGGAGGGAGTTGTAGGCCTGAGT
CTGCAGGCGAGTTATGGCGGTTCCACAATCAACAATAATCCCGCCGTCGC
CTGCTTCGTCCATTTNCAAAAGCGATGGTGGGATTTGGACTGCCTGACCA
CCGACGCTGAATCCAGTGAGCCCCACGTAATAGAACGTGTCAACTTTTTT
GTTC
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