CX674738

Overview
NameCX674738
Unique NameCX674738
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1944 contig Csv1_Contig1944:78..895. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674738 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 8.045e-67
Identity = 143/226 (63.27%), Postives = 171/226 (75.66%), Query Frame = -3
Query:   97 GLRGSSHSQAVLEGSFP----NRLNAPSNSRVAVA--RPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 756
            GLRG+S  QAVLEGS      NRLN    SRV+V   R G  +RAQQ  + PE+SRR+++GLVAAG+A GSFV+AV A+A PIKV           GT NSD+ RD  L LK+RF+IQPLSP          AK+I+NVK  IDKKAWPYVQNDLRLRASYLRYDLNT+ISAKPK+EKQSLK+LT KLFQTI NLD+AA+ KS+P+AEKYY+ETVS+LN+VL+K+G
Sbjct:   10 GLRGAS--QAVLEGSLQINGSNRLNI---SRVSVGSQRTGLVIRAQQNVSVPESSRRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230          
BLAST of CX674738 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.517e-65
Identity = 140/225 (62.22%), Postives = 165/225 (73.33%), Query Frame = -3
Query:   97 GLRGSSHSQAVLEGSFP----NRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXGTLNSDEPRDLDLPL-KERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 756
            GLRG+S  QAVLEGS      NRL+ P+ SRVAV + G  +RAQQ S E ETSRRAMLG VAAG+ASGSFV+AVLA+A PI V           GT NSD+ RD  LP  K+RF++QPL P          A +ILNVK+ ID+KAWP +QNDLRLRASYLRYDL T+ISAKPKDEK+SL+ LT KLF +I NLDHAAKIKS  EAEKYY +TVS +N+VL+K+G
Sbjct:   10 GLRGAS--QAVLEGSLQISGSNRLSGPTTSRVAVPKMGLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKLG 232          
BLAST of CX674738 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 229.565 bits (584), Expect = 1.625e-59
Identity = 139/226 (61.50%), Postives = 162/226 (71.68%), Query Frame = -3
Query:   97 GLRGSSHSQAVLEGSFP----NRLNAPSNSRVAVA-RPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXG-TLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 756
            GL G+S   AVLEGS      +RLN   + RVAVA R    VRAQQ+    ETSRR+++GLVAAG+A GSFVQAVLADA  IKV             T NSD+ RD  L LK+RF++QPL P          AKDI+NVK LID+KAWPYVQNDLR +ASYLRYDLNTIIS+KPKDEK+SLK+LT KLF TI NLD+AAK KS  +AEKYYAETVS LN+VL+K+G
Sbjct:    6 GLHGAS--PAVLEGSLKINGSSRLNG--SGRVAVAQRSRLVVRAQQSE---ETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224          
BLAST of CX674738 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.090e-55
Identity = 130/228 (57.02%), Postives = 157/228 (68.86%), Query Frame = -3
Query:   97 SQAVLEGSFP-----NRLNAPSNSRVAVARPGFTVRAQQ---------ASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLK-NLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 735
            +  +LEGS       NR  + S+SR       F VRAQQ         ++ +P+++RRAMLGLVA G+AS SFVQAVLA+A PIKV           GTLNSDE RDL LPLKERF+IQPLSP          AK+I+ VK+ ID+K      NDLRLRASYLRYDLNT+IS+KPK++KQSLK +  GKLFQ I NLD+AAK+KS P+AEKYYA+ VSTLNDVLSK+G
Sbjct:    6 ASGLLEGSLQLMSGSNR--SSSSSRTRGPAGVFIVRAQQQEQQQGMSSSAADPQSNRRAMLGLVATGLASASFVQAVLAEAKPIKVGGPPPPSGGLGGTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRESAKEIVAVKKFIDQKLGHMFINDLRLRASYLRYDLNTVISSKPKEQKQSLKESSAGKLFQDIDNLDYAAKLKSAPQAEKYYADAVSTLNDVLSKIG 231          
BLAST of CX674738 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.740e-53
Identity = 119/214 (55.61%), Postives = 147/214 (68.69%), Query Frame = -3
Query:   97 SQAVLEGSFPNRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 735
            SQ V   + P R  A   SR+AV      VRA  A+ + +T RRA+LGLVA G+A G+  QA LA+A  PIK+           GTLNSD+ RD DLPL+ERF++QPL P          A+DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTGKLF TI  LDHAAKIKS  EAEKYY  T S L DVL+K+G
Sbjct:   12 SQGVQLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217          
BLAST of CX674738 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.740e-53
Identity = 119/214 (55.61%), Postives = 147/214 (68.69%), Query Frame = -3
Query:   97 SQAVLEGSFPNRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 735
            SQ V   + P R  A   SR+AV      VRA  A+ + +T RRA+LGLVA G+A G+  QA LA+A  PIK+           GTLNSD+ RD DLPL+ERF++QPL P          A+DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTGKLF TI  LDHAAKIKS  EAEKYY  T S L DVL+K+G
Sbjct:   12 SQGVQLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217          
BLAST of CX674738 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.272e-53
Identity = 117/210 (55.71%), Postives = 143/210 (68.10%), Query Frame = -3
Query:   97 EGSFPNRLNAPSNSRVAVARPGFTVRAQQASNE-PETSRRAMLGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 720
            +G  P+R  A S +R AV      VRA    +   +  RRA++GLVA G+  G+  QA  A+    IK+           GTLNSD+ RD DLPLKERF++QPL P          A+DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTGKLF TI +LDHAAKIKSTPEAEKY+A T   L DVL+K+G
Sbjct:   13 QGVLPSR-RADSRTRTAVV----IVRASAEGDAVAQAGRRAVIGLVATGIVGGALSQAARAETVKTIKIGAPPPPSGGLPGTLNSDQARDFDLPLKERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKLG 217          
BLAST of CX674738 vs. ExPASy Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.863e-47
Identity = 106/200 (53.00%), Postives = 130/200 (65.00%), Query Frame = -3
Query:   97 APSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 693
            A S +R AV     +    + +  P   R      + A  +S    QAV A+    IK+           GTLNSD+ RD DLPLKERF++QPL P          A+DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTGKLF TI +LDHAAK+KSTPEAEKY+A T   L DVL+K+G
Sbjct:   20 ADSRTRTAVVVVRASAEGDRCAGGPRCDR------LVATASSPPLSQAVHAETVKTIKIGAPPPPSGGLPGTLNSDQTRDFDLPLKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLAKLG 213          
The following BLAST results are available for this feature:
BLAST of CX674738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSBQ2_ARATH8.045e-6763.27Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
PSBQ_SPIOL1.517e-6562.22Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_ARATH1.625e-5961.50Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ_ONOVI1.090e-5557.02Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSJ1.740e-5355.61Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSI1.740e-5355.61Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_MAIZE2.272e-5355.71Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ2_MAIZE1.863e-4753.00Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_8D07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-8D07-H14-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674738 ID=CX674738; Name=CX674738; organism=Citrus sinensis; type=EST; length=806bp
TTTGAGCGGAACGTCAGCTTGCAATAAAATTCACAGAAGTTGTTGCCTCA
CAAAATGAAAAATATAGTTTACATCAGATTATATTAATTCTGCTTAGCCA
ACCTTGGAGAGAACATCGTTCAGGGTAGATACAGTCTCCGCATAGTATTT
CTCTGCTTCAGGAGTGCTCTTAATCTTTGCCGCATGGTCAAGATTGCCGA
TGGTCTGGAAGAGCTTTCCAGTGAGGTTCTTGAGGGATTGTTTCTCATCT
TTGGGCTTAGCAGAAATGATAGTGTTGAGGTCATAGCGAAGGTATGAGGC
CCTGAGACGGAGATCATTCTGAACATAGGGCCAGGCCTTCTTGTCTATTA
ATTCCTTGACATTAAGAATATCCTTTGCTGACGCCTTTGCTCTCTCTGCT
GCCTGGGCTGGACTAAGTGGTTGGATGAAGAACCTCTCCTTCAGTGGCAG
ATCCAGGTCTCTTGGCTCATCAGAGTTCAACGTTCCAGGCAATCCGCCAG
AGGGTGGGGGAGGAGGACCAACTTTGATGGGAGTGGCATCAGCAAGTACA
GCTTGAACAAAGGAACCTGAGGCCACACCTGCAGCAACAAGACCAAGCAT
AGCACGGCGGCTAGTTTCAGGCTCGTTTGATGCCTGCTGGGCTCTAACAG
TGAAACCAGGGCGAGCCACAGCAACTCTGCTGTTGCTAGGGGCGTTCAAG
CGGTTTGGGAAGCTACCTTCAAGAACAGCCTGCGAGTGGGAGGATCCACG
TAAGCCAGCCATTGACGCCATAGCTTGTGCCATTTTTCACTAAATCGGGT
TTCCCT
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