CX674727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 259.996 bits (663), Expect = 6.984e-69 Identity = 127/151 (84.11%), Postives = 132/151 (87.42%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSI AIW CQVVLMGFVEGYR+ GAFDPLGLADDPD FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK Sbjct: 115 PEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWAYATNFVPGK 265
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_ORYSJ (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. japonica GN=RCABP89 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 2.654e-68 Identity = 127/151 (84.11%), Postives = 131/151 (86.75%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSI AIW QVVLMGFVEGYR+ GAFDPLGLADDPD FAELKVKELKNGR AMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK Sbjct: 113 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_ORYSI (Chlorophyll a-b binding protein, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_012078 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 2.654e-68 Identity = 127/151 (84.11%), Postives = 131/151 (86.75%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNL+HAQSI AIW QVVLMGFVEGYR+ GAFDPLGLADDPD FAELKVKELKNGR AMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK Sbjct: 113 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDKVYPGGAFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 263
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 2.934e-67 Identity = 125/151 (82.78%), Postives = 130/151 (86.09%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNL+HAQSI AIW CQVVLMGFVEGYR+ GAFDPLGLADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENL DHI DPVANNAWAYATNFVPGK Sbjct: 115 PEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHINDPVANNAWAYATNFVPGK 265
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 253.062 bits (645), Expect = 8.538e-67 Identity = 124/151 (82.12%), Postives = 130/151 (86.09%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSI AIW QVVLMGFVEGYR+ GAFDPLGLADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWA+ATNFVPGK Sbjct: 115 PEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHVADPVANNAWAFATNFVPGK 265
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB23_TOBAC (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum GN=CAB36 PE=3 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 1.902e-66 Identity = 122/151 (80.79%), Postives = 130/151 (86.09%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PEILSKNGVKFGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSI A+W QVVLMG +EGYR+ GAFDPLGLADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENL+DH+ADPVANNAWAYATNFVPGK Sbjct: 115 PEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK 265
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 2.484e-66 Identity = 122/151 (80.79%), Postives = 130/151 (86.09%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L KNGVKFGEAVWFKAG+QIF+EGGLDYLGNPNLIHAQSI AIW QVVLMGFVEGYR+ GAFDPLGLADDPD FAELKVKELKNGR AMFSMFGFFVQAIVTGKGPI+NLYDH+ADPVANNAWA+ATNFVPG+ Sbjct: 115 PELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 3.244e-66 Identity = 125/151 (82.78%), Postives = 129/151 (85.43%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PEILSKNGV FGEAVWFKAG+QIFSEGGLDYLGNPNLIHAQSI AIW QVVLMGFVEGYR+ GAFDPLGLADDP+ FAELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENL DHIADPVANNAWAYATNFVPGK Sbjct: 87 PEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLSDHIADPVANNAWAYATNFVPGK 237
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 250.366 bits (638), Expect = 5.534e-66 Identity = 121/151 (80.13%), Postives = 129/151 (85.43%), Query Frame = -2 Query: 167 PEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 619 PE+L+KNG+KFGEAVWFKAGAQIFSEGGLDY GNPNLIHAQSI AIW CQVVLMG +EGYR+ GAFDPLGLADDP+ AELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWAYATNFVPGK Sbjct: 116 PELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGLADDPEACAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 266
BLAST of CX674727 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.233e-65 Identity = 121/150 (80.67%), Postives = 127/150 (84.67%), Query Frame = -2 Query: 167 EILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSIWAIWPCQVVLMGFVEGYRIXXXXXXXXXXXXXXXGAFDPLGLADDPDQFAELKVKELKNGRRAMFSMFGFFVQAIVTGKGPIENLYDHIADPVANNAWAYATNFVPGK 616 E+L KNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSI AIW CQVVLMG +EGYR+ AFDPLGLADDP+ AELKVKE+KNGR AMFSMFGFFVQAIVTGKGPIENLYDH+ADPVANNAWAYATNFVPGK Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLYPGDAFDPLGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLADPVANNAWAYATNFVPGK 150 The following BLAST results are available for this feature:
BLAST of CX674727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674727 ID=CX674727; Name=CX674727; organism=Citrus sinensis; type=EST; length=620bpback to top |