EY665647
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665647 vs. ExPASy Swiss-Prot
Match: CHLP_TOBAC (Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum GN=CHLP PE=2 SV=1) HSP 1 Score: 292.738 bits (748), Expect = 1.304e-85 Identity = 150/216 (69.44%), Postives = 175/216 (81.02%), Query Frame = 1 Query: 43 MASMALKSFTGLRQSPQEQQHPHFIAQALPRQQ---KFRVSAAKTSPKLTNRNLRVXXXXXXXXXXXXXETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKKTLEVDAVIGADGANSKV 681 MAS+ALK+FTGLRQS E + ++++LP Q + R++A+K+SP++ RNLRV ETLAK G+ETFLIERK+DNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLR+RA + GASV+NGLF+KMD+P+ PYVL+YT YD G GEK+TLEVDAVIGADGANS+V Sbjct: 1 MASIALKTFTGLRQSSPEN-NSITLSKSLPFTQTHRRLRINASKSSPRVNGRNLRVAVVGGGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRDRAAEAGASVLNGLFLKMDMPKAPNAPYVLHYTAYDSKTNGAGEKRTLEVDAVIGADGANSRV 215 HSP 2 Score: 45.8246 bits (107), Expect = 1.304e-85 Identity = 26/54 (48.15%), Postives = 35/54 (64.81%), Query Frame = 3 Query: 681 AKSIHAGEYY*PLGFQEKIKTPDEKRGYYEKIWGKRTVGDKGSPEFLLGGGFPQ 842 AKSI+AG+Y + FQE+IK D+K YYE + + VGD SP+F G FP+ Sbjct: 216 AKSINAGDYEYAIAFQERIKISDDKMKYYENL-AEMYVGDDVSPDF-YGWVFPK 267
BLAST of EY665647 vs. ExPASy Swiss-Prot
Match: CHLP_ARATH (Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana GN=CHLP PE=1 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 6.422e-85 Identity = 148/217 (68.20%), Postives = 174/217 (80.18%), Query Frame = 1 Query: 49 SMALKSFTGLRQSPQEQQHPHFIAQ-----ALP-RQQKFRVSAAKTSPKLTNRNLRVXXXXXXXXXXXXXETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKKTLEVDAVIGADGANSKV 681 ++ LKSFTGLRQS EQ + F++ +LP R+ RV+AA+ +PKL+NR LRV ETLA+ G+ET LIERK+DNCKPCGGAIPLCMVGEF+LPLDIIDR+VTKMKMISPSN+AVDIG+TLK HEYIGMVRREVLDAYLRERAEK+GA+VINGLF+KMD P N++ PY L+YTEYDG G G KKT+EVDAVIGADGANS+V Sbjct: 4 TVTLKSFTGLRQSSTEQTN--FVSHVPSSLSLPQRRTSLRVTAARATPKLSNRKLRVAVIGGGPAGGAAAETLAQGGIETILIERKMDNCKPCGGAIPLCMVGEFNLPLDIIDRRVTKMKMISPSNIAVDIGRTLKEHEYIGMVRREVLDAYLRERAEKSGATVINGLFLKMDHPENWDSPYTLHYTEYDGKTGATGTKKTMEVDAVIGADGANSRV 218 HSP 2 Score: 47.3654 bits (111), Expect = 6.422e-85 Identity = 27/54 (50.00%), Postives = 35/54 (64.81%), Query Frame = 3 Query: 681 AKSIHAGEYY*PLGFQEKIKTPDEKRGYYEKIWGKRTVGDKGSPEFLLGGGFPQ 842 AKSI AG+Y + FQE+I+ PDEK YYE + + VGD SP+F G FP+ Sbjct: 219 AKSIDAGDYDYAIAFQERIRIPDEKMTYYEDL-AEMYVGDDVSPDF-YGWVFPK 270
BLAST of EY665647 vs. ExPASy Swiss-Prot
Match: CHLP_ORYSJ (Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLP PE=2 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 3.126e-66 Identity = 119/185 (64.32%), Postives = 136/185 (73.51%), Query Frame = 1 Query: 133 RQQKFRVSAAKTSPKL-TNRNLRVXXXXXXXXXXXXXETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGV-GEKKTLEVDAVIGADGANSKV 681 R + AA +SPKL + R LRV E LAK GVET LIERKLDNCKPCGGAIPLCMV EFDLPLD++DRKV KMKMISPSNVAVDIG TL PHEYIGMVRREVLDAYLR RAE GA V+NGLF++ + P+ YV++Y YD + G GEK+T EVDA++GADGANS+V Sbjct: 30 RMARLVTRAAASSPKLPSGRRLRVAVVGGGPAGGAAAEALAKGGVETVLIERKLDNCKPCGGAIPLCMVSEFDLPLDLVDRKVRKMKMISPSNVAVDIGGTLAPHEYIGMVRREVLDAYLRSRAEGAGAEVVNGLFLRYEAPKEPNGSYVVHYNHYDSSNGKAGGEKRTFEVDAIVGADGANSRV 214 HSP 2 Score: 43.1282 bits (100), Expect = 3.126e-66 Identity = 24/54 (44.44%), Postives = 34/54 (62.96%), Query Frame = 3 Query: 681 AKSIHAGEYY*PLGFQEKIKTPDEKRGYYEKIWGKRTVGDKGSPEFLLGGGFPQ 842 AK + AG+Y + FQE++K PD+K YYE+ + VGD SP+F G FP+ Sbjct: 215 AKDMGAGDYEYAIAFQERVKIPDDKMKYYEE-RAEMYVGDDVSPDF-YGWVFPK 266
BLAST of EY665647 vs. ExPASy Swiss-Prot
Match: CHLP_SYNY3 (Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803) GN=chlP PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 9.578e-56 Identity = 97/147 (65.99%), Postives = 112/147 (76.19%), Query Frame = 1 Query: 241 ETLAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHEYIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKKTLEVDAVIGADGANSKV 681 E L K G+ET+L ERKLDN KPCGGAIPLCMV EFDLP +IIDR+V KMKMISPSN+ V+IGQTLK EYIGM RREVLD +LRERAEK G VING K+D+P PY L+Y ++ G GE K L+VD VIGADGANS++ Sbjct: 19 EILVKAGIETYLFERKLDNAKPCGGAIPLCMVDEFDLPPEIIDRRVRKMKMISPSNIEVNIGQTLKDDEYIGMCRREVLDGFLRERAEKLGTKVINGTVYKLDIPSKDSDPYTLHYADH-SVGGTTGEMKILKVDVVIGADGANSRI 164 HSP 2 Score: 43.5134 bits (101), Expect = 9.578e-56 Identity = 20/46 (43.48%), Postives = 32/46 (69.57%), Query Frame = 3 Query: 681 AKSIHAGEYY*PLGFQEKIKTPDEKRGYYEKIWGKRTVGDKGSPEF 818 AK+I AG+Y + FQE+I+ P++K YY+++ + VGD SP+F Sbjct: 165 AKAIDAGDYNYAIAFQERIRLPEDKMAYYDEL-AEMYVGDDVSPDF 209
BLAST of EY665647 vs. ExPASy Swiss-Prot
Match: BCHP_RHOCA (Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus GN=bchP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.267e-16 Identity = 56/147 (38.10%), Postives = 87/147 (59.18%), Query Frame = 1 Query: 247 LAKNGVETFLIERKLDNCKPCGGAIPLCMVGEFDLPLDIIDRKVTKMKMISPSNVAVDIGQTLKPHE--YIGMVRREVLDAYLRERAEKNGASVINGLFMKMDLPRNFEQPYVLYYTEYDGTKGGVGEKKTLEVDAVIGADGANSKV 681 +A+ G++ L++R KPCGGAIP ++ +FD+P ++ K+T +MISP+ VDI P E ++GMV RE D +LRERA K GA + G +++++ R+ + V++ + GE+ E VIGADGANS+V Sbjct: 21 MARAGLKVALLDRA-GRIKPCGGAIPPRLIRDFDIPDHLLVAKITSARMISPTGRFVDI-----PIENGFVGMVDREDYDEWLRERAGKAGAERLTGTWLRIE--RDSGKTVVVWRDKV------TGEEMKAETRVVIGADGANSQV 153 The following BLAST results are available for this feature:
BLAST of EY665647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665647 ID=EY665647; Name=EY665647; organism=Citrus sinensis; type=EST; length=869bpback to top |