CX674594
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX674594 vs. ExPASy Swiss-Prot
Match: RR5_SPIOL (30S ribosomal protein S5, chloroplastic OS=Spinacia oleracea GN=rps5 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.675e-43 Identity = 104/234 (44.44%), Postives = 128/234 (54.70%), Query Frame = 2 Query: 185 RLPKLTLSTVLVRASESDKPN----------------------GIVFDDFNNPDEDAAVFXXXXXXXXXXXXXSFDELPMETEDEIAAAYEELYGPAYAGVSVSGNDVYVMDSKAKKTSAFG-KTKKEKVKDGFEEXXXXXXXXXXXXXXXXXLKFRAIXXXXXXXXXXXXXXXXXXXXXXXXQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGA 817 R+P +T L+ S S KP I F + +NPDE+ F + DE P E+E+EIA AYEELYG AY+G S+ GNDVY MDSK KK + FG K+KKEK++DGFEE ++FRAI QK+AVDARRNI+TVPMTKYLTFPHR++ D+GAA+VMLRPA+PGTGVIAGGA Sbjct: 20 RIPLFPTTTTLLSLSSSSKPLFLSLSSTRSFPTHLYCIKKDDIDITFFEQDNPDEEIT-FDPPEKPEGYIPPRAVDEPPFESEEEIALAYEELYGAAYSGESLLGNDVYAMDSKIKKATGFGSKSKKEKIRDGFEENVVQVRRVTKVVKGGKHMRFRAIVVVGDKKGQVGVGVGKAKEVVSAVQKAAVDARRNIITVPMTKYLTFPHRNEADYGAARVMLRPAAPGTGVIAGGA 252
BLAST of CX674594 vs. ExPASy Swiss-Prot
Match: RR5_ARATH (30S ribosomal protein S5, chloroplastic OS=Arabidopsis thaliana GN=rps5 PE=1 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.675e-43 Identity = 104/205 (50.73%), Postives = 119/205 (58.05%), Query Frame = 2 Query: 206 STVLVRASESDKPNGIVFDDFNNPDEDAAVFXXXXXXXXXXXXXSFDELPMETEDEIAAAYEELYGPAYAGVSVSGNDVYVMDSKAKKTSAFG-KTKKEKVKDGFEEXXXXXXXXXXXXXXXXXLKFRAIXXXXXXXXXXXXXXXXXXXXXXXXQKSAVDARRNIVTVPMTKYLTFPHRSDGDFGAAKVMLRPASPGTGVIAGGA 817 S LV+AS +D I F+D VF FDE ETE+EIA A+EELYGPAY+G S+ G D+YVMDSK KK+S G K KK+K++DGFEE LKFRAI QKSA+DARRNIV VPMTKY TFPHRS+GD+GAAKVMLRPASPGTGVIAGGA Sbjct: 44 SLTLVKASSTDTET-IFFEDETPEITANVVFDPPIAPEGFVSPPYFDEGSDETEEEIATAFEELYGPAYSGESMLGKDIYVMDSKHKKSSGIGGKPKKDKIRDGFEERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIVQVPMTKYSTFPHRSEGDYGAAKVMLRPASPGTGVIAGGA 247 The following BLAST results are available for this feature:
BLAST of CX674594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674594 ID=CX674594; Name=CX674594; organism=Citrus sinensis; type=EST; length=818bpback to top |