EY665593

Overview
NameEY665593
Unique NameEY665593
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY665593 vs. ExPASy Swiss-Prot
Match: GCN1L_HUMAN (Translational activator GCN1 OS=Homo sapiens GN=GCN1L1 PE=1 SV=5)

HSP 1 Score: 71.633 bits (174), Expect = 6.033e-12
Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 3 
Query:    3 FSSSTSTTFIKCLQDSTRTVRXXXXXXXXXXXXXXTRVDPLVGDLLSSLQ-VSDAGIREAILTALKGVLKHAGKSVSSAVKIRVYSVLKDLVYHDDDHVRVSAASILGIMSQYM 341
            F     TTF K LQDS R VR               +VDPL  +LL+ ++ + D G+R+ +L AL+ V++ AG  V + ++  + S+L  ++ HD+D+ R+S+A  LG +  ++
Sbjct: 2344 FLPQLQTTFTKALQDSNRGVRLKAADALGKLISIHIKVDPLFTELLNGIRAMEDPGVRDTMLQALRFVIQGAGAKVDAVIRKNIVSLLLSMLGHDEDNTRISSAGCLGELCAFL 2457
The following BLAST results are available for this feature:
BLAST of EY665593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GCN1L_HUMAN6.033e-1233.33Translational activator GCN1 OS=Homo sapiens GN=GC... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-070-D02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665593 ID=EY665593; Name=EY665593; organism=Citrus sinensis; type=EST; length=836bp
CCTTTTCTTCCTCAACTTCAACTACATTTATCAAGTGTCTACAGGATAGT
ACAAGGACTGTTCGTTCAAGTGCTGCTCTTGCACTCGGTAAGCTCAGTGC
ACTCAGTACCAGGGTTGACCCTCTAGTTGGTGATCTTCTGTCGAGTTTGC
AGGTATCTGATGCGGGGATCAGGGAGGCAATATTGACTGCTTTAAAAGGT
GTACTGAAGCATGCTGGGAAGAGTGTGAGCAGTGCTGTTAAAATTCGTGT
CTACTCTGTCCTGAAGGATTTAGTTTATCATGATGATGACCATGTTCGAG
TATCTGCTGCGAGCATATTGGGCATCATGTCGCAGTACATGGAAGATGGT
CAGCTGGCTGACCTGCTTCAGGAACTCCTAAATTTAGCCTCCTCTCCTGC
CTGGGCTGCTAGACATGGCTCTGTACTCGTATTCGCTACCTTTCTTAGGC
ACAATCCCTCTGCGATCTCTATGTCTGCATTGTTCCTGGTCTATCTTAAA
CCGTCTCAAAACCTCCCTTGAAAGATGAGAAGTTTCCCTCTTCCTGAAGC
TTCAACCCAGGCTTTAAGGAAGGTTTCTATTCCATCAAATTCACAAGTGG
TCCTTGCCAACACCACAGCAATTGGTTGATATTTCTTGCCTCTGGGGGCG
GCCGCCCTGGGATGGATAATTCCAAGGGGAATTAAAAAAAGGGGCTTTTC
CTGCCCTAAAATCCGTTGGCAAAAAAAAATCCCTCCCCCAATTATGGCCC
ATTGGGGGCCAATTTGGGCCCTGGCCTTGGGTGAAAAGTTTAAAAAAAGG
GGAAGAAAACCCTTGAACAAAAGGGGTTGGAAAAAA
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