EY665590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.629e-33 Identity = 75/140 (53.57%), Postives = 99/140 (70.71%), Query Frame = 2 Query: 137 HGSGAATS-DPNTSFFGTT*KKATSKIPPSNGPSASFNITAEDY-DNHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVK 550 +GSGA S P+T+FFG++ KK+ +K P ++ S +F I A++ ++ QT D+W G AYD SDDQQDITR KG VD+LF PM++ THYAVM SYDYIS+GLR YNL++ +D YIA A MD LV I KNF+ +K Sbjct: 19 NGSGARASLVPSTAFFGSSLKKSAAKFPKAS--SGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIK 156
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 5.629e-33 Identity = 75/140 (53.57%), Postives = 99/140 (70.71%), Query Frame = 2 Query: 137 HGSGAATS-DPNTSFFGTT*KKATSKIPPSNGPSASFNITAEDY-DNHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVK 550 +GSGA S P+T+FFG++ KK+ +K P ++ S +F I A++ ++ QT D+W G AYD SDDQQDITR KG VD+LF PM++ THYAVM SYDYIS+GLR YNL++ +D YIA A MD LV I KNF+ +K Sbjct: 19 NGSGARASLVPSTAFFGSSLKKSAAKFPKAS--SGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIK 156
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.765e-32 Identity = 81/174 (46.55%), Postives = 103/174 (59.20%), Query Frame = 2 Query: 137 HGSGAATSDPNTSFFGTT*KKA-TSKIPPSNGPSASFNITAEDYD---NHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVKESSHLWEYRGDKRPRKIITTLAWF*PRMAFNP 646 +GSG S P+++FFGT+ KK +S++P S S SF I A D + QT+ DRW G AYD SDDQQDITR KG VDSLF PM THYAV+ S+ Y+S GLR YN ++ D YIA A +D LV IAKNFM +K L + G + + L + +M NP Sbjct: 19 NGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVF--AKMGINP 190
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.415e-30 Identity = 68/138 (49.28%), Postives = 88/138 (63.77%), Query Frame = 2 Query: 137 HGSGAATSDPNTSFFGTT*KKATSKIPPSNGPSASFNITAEDYDNHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVK 550 +GS ++ S P+++F G++ KK S+ S S S I A ++ QT DRW G A+D SDDQQDITR KG VDSLF P + TH+A+M SY+YIS GLR YN ++ +D YIA A MD LV I KNFM +K Sbjct: 19 NGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMK 156
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 7.608e-30 Identity = 81/174 (46.55%), Postives = 101/174 (58.05%), Query Frame = 2 Query: 137 HGSGAATSDPNTSFFGTT*KKAT-SKIPPSNGPSASFNITA---EDYDNHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVKESSHLWEYRGDKRPRKIITTLAWF*PRMAFNP 646 +GSGA S P ++FFGT+ KKA S++P S + SF I A E ++ QT DRW G AYD SDDQQDITR KG VD LF PM THYAVM SY+Y+S GLR L++ D YIA A +D LV I KNFM +K L + G + + L + +M NP Sbjct: 19 NGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVF--AKMGINP 188
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.435e-28 Identity = 71/142 (50.00%), Postives = 87/142 (61.27%), Query Frame = 2 Query: 137 HGSGAATSDPNTSFFGTT*KKATSK-IPPSNGPSASFNITAEDYD---NHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVK 550 + S A TS P+T+FFG T KK K + + S I AE D QT DRW G D SDDQQDITR KG VDSLF P T TH+AV++SY+Y+S+GLR YNL++ +D YIA A MD LV I KNF+ +K Sbjct: 19 NNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIK 160
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.196e-28 Identity = 75/174 (43.10%), Postives = 99/174 (56.90%), Query Frame = 2 Query: 137 HGSGAATSDPNTSFFGTT*KKATSK-IPPSNGPSASFNITAEDYD---NHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVKESSHLWEYRGDKRPRKIITTLAWF*PRMAFNP 646 + S A TS P+T+FFG T KK K + + S I AE+ D QT DRW G D SDDQQDI R KG VDSLF P T TH+AV++SY+Y+S+GLR YN+++T+D YIA + MD LV I KNF+ +K L + G + + L + +M NP Sbjct: 19 NNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVF--RKMGINP 190
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.615e-27 Identity = 73/142 (51.41%), Postives = 90/142 (63.38%), Query Frame = 2 Query: 137 HGSGA-ATSDPNTSFFGTT*KKAT--SKIPPSNGPS-ASFNITAEDYDNHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVK 550 +GSG+ A S P ++F G KK S+ SN S SF + A D QT DRW G AYD SDDQQDITR KG VDS+F PM T TH+AV+ SY+Y+S+GLR YNL++ +D YIA A MD LV I KNF+ +K Sbjct: 19 NGSGSGAVSAPASTFLG---KKVVTVSRFAQSNKKSNGSFKVLAVKEDK-QTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIK 156
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.754e-26 Identity = 67/161 (41.61%), Postives = 91/161 (56.52%), Query Frame = 2 Query: 164 PNTSFFGTT*KKATSKIPPSNGPSASFNITAEDYDNHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVKESSHLWEYRGDKRPRKIITTLAWF*PRMAFNP 646 PN++F G+ K +S+ S + +F I AE + QT+ D+W G A+D SDDQQDITR KG D LF PM T TH AV+ SY+YIS GLR Y+ ++ +D YIA A MD L I KNF+ +K L + G + + L + +M NP Sbjct: 26 PNSAFLGSR-LKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVF--AKMGINP 183
BLAST of EY665590 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.907e-26 Identity = 69/171 (40.35%), Postives = 98/171 (57.31%), Query Frame = 2 Query: 137 HGSGAATSDPNTSFFGTT*KKATSK-IPPSNGPSASFNITAEDYDNHQTKHDRWNGHAYDESDDQQDITRRKGAVDSLFLPPMRTATHYAVMRSYDYISRGLRTYNLNDTIDRLYIATAIMDYLVDPIAKNFMPAAQVKESSHLWEYRGDKRPRKIITTLAWF*PRMAFNP 646 + S A TS P+T+FFG + KK +K + + + + A++ D +TK DRW G + SDDQQDI R KG VDSLF P T TH+A+M SY+Y+S+ L+TY L++ +D YIA A MD LV I KNF+ +K L + G + + L + +M NP Sbjct: 19 NNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVD--ETKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVF--RKMGINP 185 The following BLAST results are available for this feature:
BLAST of EY665590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665590 ID=EY665590; Name=EY665590; organism=Citrus sinensis; type=EST; length=790bpback to top |