CX674545

Overview
NameCX674545
Unique NameCX674545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4316 contig Csv1_Contig4316:10..904. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX674545 vs. ExPASy Swiss-Prot
Match: FBL15_ARATH (F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 1.245e-66
Identity = 129/215 (60.00%), Postives = 151/215 (70.23%), Query Frame = -2 
Query:  250 SLESLYKKGSLPALQELDLSYGTLCQSAIEELLAYCTHLTHVSLNGCGNMHDLNWGSSGCQPFESPSVYNSCGIFPHENIHESIDQPNRLLQNLNCVGCPNIRKVFIPPQARCFHXXXXXXXXXXXLKEVDVAXXXXXXXXXXXXXXLETLKLDCPKLTSLFLQSCNIDEEGVESAITQCGMLETLDVRFCPKICSTSMGRLRAACPSLKRIFSS 894
            SLE LYK+G+LPAL+ELDLSYGTLCQ+AI++LLA CTHLTH+SLNGC NMHDL+WGS+    F+   VY+S      +N  E  +  NRLLQNLNCVGCPNIRKV IPP AR +H           LKEVD+               LE LKL CP+L SLFLQSCN+DE GVE+AI+ C  LETLD+RFCPKI S SM + R  CPSLKR+FSS
Sbjct:  775 SLEPLYKEGALPALEELDLSYGTLCQTAIDDLLACCTHLTHLSLNGCVNMHDLDWGSTSVHLFDYFGVYSSS-----DNTQEPAETANRLLQNLNCVGCPNIRKVLIPPAARFYHLSTLNLSLSVNLKEVDLTCSNLVLLNLSNCCSLEVLKLGCPRLASLFLQSCNMDEAGVEAAISGCSSLETLDLRFCPKISSVSMSKFRTVCPSLKRVFSS 984
The following BLAST results are available for this feature:
BLAST of CX674545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FBL15_ARATH1.245e-6660.00F-box/LRR-repeat protein 15 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_7B07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-7B07-D13-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674545 ID=CX674545; Name=CX674545; organism=Citrus sinensis; type=EST; length=895bp
TTTTAAAACAAACAATGATAAATTAACATAGAAACAGCATTTTATTGTGT
TGTTACACAAAGACAGCCACATCAGGTACAAATAAAAATATACCCAAACA
AAAACTGGCGTGAAAGATGACCATTTACAATGACATTAAAAGCAGATAAT
GGCAAGAATACCCTGCAGAAAGAAAATAACCACTTAAGCCAACGATAATT
TTTAAAAAAACAAAGAGCAAAATTTTCTGTTGTATCATGAAGTGGTCAGG
CTGCTGAAGATGCGCTTCAAACTAGGGCACGCTGCACGTAACCTGCCCAT
GCTCGTTGAGCATATCTTCGGACAAAACCGGACATCCAGAGTCTCAAGCA
TGCCACACTGAGTGATTGCACTTTCAACCCCTTCTTCATCAATGTTACAG
GACTGAAGAAATAGACTAGTCAATTTTGGGCAATCAAGCTTCAATGTTTC
CAAAGAGCAGCAATTGCTCAAATTAAGAAAGCACAAATTGAAACAAGCAA
CATCAACTTCCTTCAAGTTGGCAGATAGAGATAGATTTAAAGATGACAAG
TGAAAACAGCGGGCCTGGGGTGGGATGAAAACTTTCCTAATATTCGGACA
ACCGACACAGTTGAGATTCTGCAGTAGGCGGTTGGGCTGGTCAATTGACT
CGTGAATGTTCTCATGAGGAAAAATTCCACAGGAGTTATATACAGAGGGT
GACTCAAAAGGCTGGCAGCCACTAGAACCCCAATTCAGGTCATGCATATT
GCCACAACCATTCAAGCTAACATGAGTGAGGTGTGTACAGTAAGCAAGAA
GCTCCTCTATAGCTGACTGACAAAGAGTCCCATAAGACAAGTCTAATTCC
TGGAGAGCTGGCAGAGAACCTTTCTTGTAAAGAGACTCCAATGAC
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