CV886565

Overview
NameCV886565
Unique NameCV886565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV886565 vs. ExPASy Swiss-Prot
Match: LYPA2_RAT (Acyl-protein thioesterase 2 OS=Rattus norvegicus GN=Lypla2 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.061e-25
Identity = 72/202 (35.64%), Postives = 108/202 (53.47%), Query Frame = 1
Query:  235 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PVDVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCL-SISGIRHLKFKSF 822
            +  A +++LHGLGD G SW+  L ++ LP++K+ICP AP  PV +       +WFD+  LS D PED  G+  +A +I  L+  E     P + ++ +GGFS G A++LY+A  C         P+   L  +V LS WLP  RN      GS      A  L IL  HG  D +VP ++G  +A  L ++     ++FK++
Sbjct:   22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPAN-RIVLGGFSQGGALSLYTALTC---------PH--PLAGIVALSCWLPLHRNFPQAANGS------AKDLAILQCHGELDPMVPVRFGALTAEKLRTVVTPARVQFKTY 205          
BLAST of CV886565 vs. ExPASy Swiss-Prot
Match: LYPA2_MOUSE (Acyl-protein thioesterase 2 OS=Mus musculus GN=Lypla2 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.061e-25
Identity = 72/202 (35.64%), Postives = 108/202 (53.47%), Query Frame = 1
Query:  235 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PVDVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCL-SISGIRHLKFKSF 822
            +  A +++LHGLGD G SW+  L ++ LP++K+ICP AP  PV +       +WFD+  LS D PED  G+  +A +I  L+  E     P + ++ +GGFS G A++LY+A  C         P+   L  +V LS WLP  RN      GS      A  L IL  HG  D +VP ++G  +A  L ++     ++FK++
Sbjct:   22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPAN-RIVLGGFSQGGALSLYTALTC---------PH--PLAGIVALSCWLPLHRNFPQAANGS------AKDLAILQCHGELDPMVPVRFGALTAEKLRTVVTPARVQFKTY 205          
BLAST of CV886565 vs. ExPASy Swiss-Prot
Match: LYPA2_HUMAN (Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYPLA2 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.303e-24
Identity = 72/202 (35.64%), Postives = 107/202 (52.97%), Query Frame = 1
Query:  235 KHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PVDVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCL-SISGIRHLKFKSF 822
            +  A +++LHGLGD G SW+  L ++ LP++K+ICP AP  PV +       +WFD+  LS D PED  G+  +A +I  L+  E     P + ++ +GGFS G A++LY+A  C         P+   L  +V LS WLP  R       GS      A  L IL  HG  D +VP ++G  +A  L S+     ++FK++
Sbjct:   22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPAN-RIVLGGFSQGGALSLYTALTC---------PH--PLAGIVALSCWLPLHRAFPQAANGS------AKDLAILQCHGELDPMVPVRFGALTAEKLRSVVTPARVQFKTY 205          
BLAST of CV886565 vs. ExPASy Swiss-Prot
Match: APTH1_SCHPO (Acyl-protein thioesterase 1 OS=Schizosaccharomyces pombe GN=SPAC8E11.04c PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.070e-21
Identity = 68/195 (34.87%), Postives = 99/195 (50.77%), Query Frame = 1
Query:  217 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLP-LPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTE-----PVDVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCL 783
            ++ P   H AT+++LHGLGD+G  WS +  +     +IKWI P AP+ PV +  G    AW+D+   +D   ED  G+  SA  +  L+  E     P D ++ IGGFS G  V+LY+           G+ Y   L  ++G SG+LP    L +K   +   +R A  +PILLT+   D +VP      SA  L
Sbjct:    9 IINPSVAHTATVIFLHGLGDSGQGWSFMANTWSNFKHIKWIFPNAPSIPVTVNNGMKMPAWYDIYSFADMKREDENGILRSAGQLHELIDAELALGIPSD-RILIGGFSQGCMVSLYA-----------GLTYPKRLAGIMGHSGFLP----LASKFPSA--LSRVAKEIPILLTYMTEDPIVPSVLSSASAKYL 185          
BLAST of CV886565 vs. ExPASy Swiss-Prot
Match: APT11_DICDI (Acyl-protein thioesterase 1 homolog 1 OS=Dictyostelium discoideum GN=DDB_G0282005 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.397e-21
Identity = 67/199 (33.67%), Postives = 103/199 (51.76%), Query Frame = 1
Query:  238 HQATIVWLHGLGDNGSSWSQLLESLPLPN---IKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPVDVKVG-----IGGFSMGAAVAL---YSATCCALGRYGNGIPYYVNLRAVVGLSGWLP-GSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGI 798
            H AT+++ HGLGD+G+ W +++E +   N   I++ICP AP + V + GGF   +W+D+  LS  G ED   +D S   I  ++  E  + K+      IGGFS GAA++L   YS T   LG               + LSG+LP  ++ + N +             P+L+ HG CD VV +++G+ S + L   GI
Sbjct:   18 HSATVIFSHGLGDSGAGWIEVMEEIQSRNNGHIRFICPNAPIQAVTLNGGFKMPSWYDIKSLSSRGDEDPAQVDESKNIIETIIKHEMEEEKIPAERIIIGGFSQGAALSLYTFYSQTETKLG-------------GCIALSGYLPLATKFVANSLNKEQ---------PLLMIHGDCDQVVRHQWGKLSFDHLKSQGI 194          
BLAST of CV886565 vs. ExPASy Swiss-Prot
Match: APTH1_YARLI (Acyl-protein thioesterase 1 OS=Yarrowia lipolytica GN=YALI0A18337g PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.935e-21
Identity = 69/207 (33.33%), Postives = 110/207 (53.14%), Query Frame = 1
Query:  229 KGKHQATIVWLHGLGDNGSSWSQLLE----SLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSD-DGPEDWEGLDASAAHIANLLSTE-----PVDVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCLSISGIRHLKFKS 819
            K  H AT+++LHGLGD+G+ W  L E    +  L ++K+I P AP +PV++  G    +W+D+ EL++ +  +D EG+  S   + +L+  E     P + ++ IGGFS G AV+L  AT C              L  +VGLSG++P    +++ I   H    +    P+ L HG  D V+ + YG+ S + +    I  LKFK+
Sbjct:   12 KAAHTATVIFLHGLGDSGAGWMFLAEEARKAQRLNHVKFIFPEAPQQPVSLNFGMRMPSWYDIKELANVNAAQDQEGILESVGRLESLIKEETDAGVPAN-RIVIGGFSQGCAVSL--ATGCLT---------QTKLGGIVGLSGYVP----IKDYILSQHNTTNQ--DTPMFLAHGTADQVIRFDYGKLSRDFI----INELKFKN 196          
BLAST of CV886565 vs. ExPASy Swiss-Prot
Match: LYPA1_RABIT (Acyl-protein thioesterase 1 OS=Oryctolagus cuniculus GN=LYPLA1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.018e-20
Identity = 65/189 (34.39%), Postives = 91/189 (48.15%), Query Frame = 1
Query:  217 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPVDVKVGI-------GGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYG 762
            VV    K  A +++LHGLGD G  W++    +  P+IK+ICP AP  PV +       +WFD+  LS D  ED  G+  +A  +  L+  E   VK GI       GGFS G A++LY+A           +     L  V  LS WLP   +     +G   +A R   + +L  HG CD +VP  +G
Sbjct:   13 VVPAARKATAAVIFLHGLGDTGHGWAEAFAGIKSPHIKYICPHAPVMPVTLNMNMAMPSWFDIVGLSPDSQEDESGIKQAAETVKALIDQE---VKNGIPSNRIILGGFSQGGALSLYTA-----------LTTQQKLAGVTALSCWLPLRASFS---QGPINSANR--DISVLQCHGDCDPLVPLMFG 182          
BLAST of CV886565 vs. ExPASy Swiss-Prot
Match: LYPA1_MOUSE (Acyl-protein thioesterase 1 OS=Mus musculus GN=Lypla1 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.018e-20
Identity = 65/189 (34.39%), Postives = 91/189 (48.15%), Query Frame = 1
Query:  217 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPVDVKVGI-------GGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYG 762
            VV    K  A +++LHGLGD G  W++    +  P+IK+ICP AP  PV +       +WFD+  LS D  ED  G+  +A  +  L+  E   VK GI       GGFS G A++LY+A           +     L  V  LS WLP   +     +G   +A R   + +L  HG CD +VP  +G
Sbjct:   13 VVPAARKATAAVIFLHGLGDTGHGWAEAFAGIKSPHIKYICPHAPVMPVTLNMNMAMPSWFDIVGLSPDSQEDESGIKQAAETVKALIDQE---VKNGIPSNRIILGGFSQGGALSLYTA-----------LTTQQKLAGVTALSCWLPLRASFS---QGPINSANR--DISVLQCHGDCDPLVPLMFG 182          
BLAST of CV886565 vs. ExPASy Swiss-Prot
Match: APTH1_CRYNE (Acyl-protein thioesterase 1 OS=Cryptococcus neoformans GN=CNF02430 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20
Identity = 62/197 (31.47%), Postives = 100/197 (50.76%), Query Frame = 1
Query:  220 VRPKGKHQATIVWLHGLGDNGSSWSQLLESL--PLPNIKWICPTAPTRPVAILGGFPCTAWFDV---GELSDDGPEDWEGLDASAAHIANLLSTEP----VDVKVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKIEGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCL 783
            + PK  H AT+++LHGLGD+G  W  + + L    PN+KWI P APT PV++  G    +WFD+    +L +   +D +G+  +   +  L+  E      + ++ +GGFS G A+++            N +     L  VV LS W+P    L +KI      +  A  +P+   HG  D VV Y++G++S + L
Sbjct:   10 ISPKEAHTATVIFLHGLGDSGHGWLPVAKMLWSSFPNVKWILPHAPTIPVSLNHGMAMPSWFDIRHLDKLDNSENDDEQGMLETLKSVDELIQAEVDSGIPENRIVLGGFSQGGAISVL-----------NMLTTKRKLAGVVALSTWVP----LNHKI--VQMMSEHAKDIPVFWGHGTNDPVVDYRFGQRSVDFL 189          
BLAST of CV886565 vs. ExPASy Swiss-Prot
Match: LYPA1_PONAB (Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYPLA1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.442e-20
Identity = 71/211 (33.65%), Postives = 102/211 (48.34%), Query Frame = 1
Query:  217 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPEDWEGLDASAAHIANLLSTEPVDVKVGI-------GGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLPGSRNLRNKI-EGSHEAARRAASLPILLTHGLCDDVVPYKYGEKSANCL-SISGIRHLKFKSF 822
            +V    K  A +++LHGLGD G  W++    +   +IK+ICP AP RPV +       +WFD+  LS D  ED  G+  +A +I  L+  E   VK GI       GGFS G A++LY+A           +     L  V  LS WLP    LR    +G    A R   + IL  HG CD +VP  +G  +   L ++    ++ FK++
Sbjct:   13 IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNMAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQE---VKNGIPSNRIILGGFSQGGALSLYTA-----------LTTQQKLAGVTALSCWLP----LRASFPQGPIGGANR--DISILQCHGDCDPLVPLMFGSLTVEKLKTLVNPANVTFKTY 203          
The following BLAST results are available for this feature:
BLAST of CV886565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
LYPA2_RAT6.061e-2535.64Acyl-protein thioesterase 2 OS=Rattus norvegicus G... [more]
LYPA2_MOUSE6.061e-2535.64Acyl-protein thioesterase 2 OS=Mus musculus GN=Lyp... [more]
LYPA2_HUMAN2.303e-2435.64Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYP... [more]
APTH1_SCHPO1.070e-2134.87Acyl-protein thioesterase 1 OS=Schizosaccharomyces... [more]
APT11_DICDI1.397e-2133.67Acyl-protein thioesterase 1 homolog 1 OS=Dictyoste... [more]
APTH1_YARLI6.935e-2133.33Acyl-protein thioesterase 1 OS=Yarrowia lipolytica... [more]
LYPA1_RABIT2.018e-2034.39Acyl-protein thioesterase 1 OS=Oryctolagus cunicul... [more]
LYPA1_MOUSE2.018e-2034.39Acyl-protein thioesterase 1 OS=Mus musculus GN=Lyp... [more]
APTH1_CRYNE2.635e-2031.47Acyl-protein thioesterase 1 OS=Cryptococcus neofor... [more]
LYPA1_PONAB3.442e-2033.65Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYP... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_023H08_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_023_T3_H08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV886565 ID=CV886565; Name=CV886565; organism=Citrus sinensis; type=EST; length=822bp
CAAGAAAGAAAACGGAAAGGAAGGAAAAAAGTTGGCAAGCTTTCTCTTGC
TTCTCTTGCACATAAGTTATCATTTTCCAGTAGCTCCTCTTCTGTCTTTT
CCATAAGTGGAGTTTTTAGTGCAGTTTGTAGCAAAGAGAAAATGAGCTAT
TCCCACCAAACCGTGGGCTCTGGTAGCAGAGCCGCTAGAAGGACATTTGA
GTTTGGAAGGACTCATGTGGTGAGGCCCAAAGGGAAACATCAGGCTACCA
TAGTTTGGTTGCATGGCCTGGGAGATAATGGCTCGAGCTGGTCCCAGTTA
TTGGAAAGCCTTCCTCTGCCAAATATAAAATGGATTTGTCCAACTGCTCC
TACTCGTCCAGTGGCAATACTTGGGGGATTTCCATGCACTGCATGGTTTG
ATGTGGGAGAGCTTTCAGATGATGGTCCGGAAGATTGGGAGGGTTTAGAT
GCTTCAGCAGCACATATTGCAAACTTGTTGTCAACAGAACCAGTTGATGT
TAAAGTTGGTATCGGAGGCTTCAGCATGGGTGCTGCAGTGGCACTTTACT
CAGCAACATGTTGTGCTCTGGGTAGGTATGGAAATGGGATTCCATACTAT
GTCAACTTAAGGGCGGTTGTAGGATTAAGTGGCTGGCTTCCAGGTTCAAG
AAACTTAAGGAACAAAATAGAAGGATCACATGAGGCGGCAAGGCGTGCTG
CATCCTTGCCCATTTTGCTCACTCATGGACTTTGTGATGATGTAGTCCCC
TATAAATACGGAGAGAAATCTGCCAACTGCTTGAGTATATCCGGAATTCG
TCATCTCAAATTCAAATCCTTT
back to top