CX674487

Overview
NameCX674487
Unique NameCX674487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674487 vs. ExPASy Swiss-Prot
Match: ARK2_ARATH (Armadillo repeat-containing kinesin-like protein 2 OS=Arabidopsis thaliana GN=ARK2 PE=1 SV=2)

HSP 1 Score: 55.4546 bits (132), Expect = 1.623e-15
Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 3
Query:  240 VPGRVRVAVRLRP*NEEETVADVDFSDCVALQTEV 344
            VPGRVRVAVRLRP N +E+VAD DF+DCV LQ E+
Sbjct:   57 VPGRVRVAVRLRPRNADESVADADFADCVELQPEL 91          

HSP 2 Score: 48.1358 bits (113), Expect = 1.623e-15
Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 1
Query:  448 SDTYEFDEVFTESASQKHVCEVVAKPIVE 534
            ++TYEFDEV TE+ASQK V EVVAKP+VE
Sbjct:  103 TETYEFDEVLTEAASQKRVYEVVAKPVVE 131          
BLAST of CX674487 vs. ExPASy Swiss-Prot
Match: ARK3_ARATH (Armadillo repeat-containing kinesin-like protein 3 OS=Arabidopsis thaliana GN=ARK3 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.625e-15
Identity = 26/35 (74.29%), Postives = 29/35 (82.86%), Query Frame = 3
Query:  240 VPGRVRVAVRLRP*NEEETVADVDFSDCVALQTEV 344
            VPGRVRVAVRLRP N EE +AD DF+DCV LQ E+
Sbjct:   67 VPGRVRVAVRLRPRNGEELIADADFADCVELQPEL 101          

HSP 2 Score: 46.9802 bits (110), Expect = 4.625e-15
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 1
Query:  448 SDTYEFDEVFTESASQKHVCEVVAKPIVE 534
            +DT+EFDEV TE ASQK V EVVAKP+VE
Sbjct:  113 TDTFEFDEVLTEYASQKRVYEVVAKPVVE 141          
BLAST of CX674487 vs. ExPASy Swiss-Prot
Match: ARK2_ORYSJ (Armadillo repeat-containing kinesin-like protein 2 OS=Oryza sativa subsp. japonica GN=Os06g0137100 PE=2 SV=1)

HSP 1 Score: 48.1358 bits (113), Expect = 3.952e-13
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 1
Query:  448 SDTYEFDEVFTESASQKHVCEVVAKPIVE 534
            S+TYEFDEV TE ASQK V EVVAKP+VE
Sbjct:   97 SETYEFDEVLTEFASQKRVYEVVAKPVVE 125          

HSP 2 Score: 47.3654 bits (111), Expect = 3.952e-13
Identity = 23/35 (65.71%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  240 VPGRVRVAVRLRP*NEEETVADVDFSDCVALQTEV 344
            V  RVRVAVRLRP N +E  AD DF DCV LQ E+
Sbjct:   51 VSSRVRVAVRLRPRNADELAADADFGDCVELQPEL 85          
BLAST of CX674487 vs. ExPASy Swiss-Prot
Match: ARK1_ARATH (Armadillo repeat-containing kinesin-like protein 1 OS=Arabidopsis thaliana GN=ARK1 PE=1 SV=2)

HSP 1 Score: 46.9802 bits (110), Expect = 4.130e-12
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 3
Query:  243 PGRVRVAVRLRP*NEEETVADVDFSDCVALQTEV 344
            PGRVRV+VR+RP N EE ++D DF+D V LQ E+
Sbjct:  102 PGRVRVSVRVRPRNGEELISDADFADLVELQPEI 135          

HSP 2 Score: 45.0542 bits (105), Expect = 4.130e-12
Identity = 21/36 (58.33%), Postives = 28/36 (77.78%), Query Frame = 1
Query:  448 SDTYEFDEVFTESASQKHVCEVVAKPIVEVCYGWYS 555
            S++Y+FDEVFT++ASQK V E VAKP+VE     Y+
Sbjct:  147 SESYKFDEVFTDTASQKRVYEGVAKPVVEGVLSGYN 182          
The following BLAST results are available for this feature:
BLAST of CX674487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ARK2_ARATH1.623e-1574.29Armadillo repeat-containing kinesin-like protein 2... [more]
ARK3_ARATH4.625e-1574.29Armadillo repeat-containing kinesin-like protein 3... [more]
ARK2_ORYSJ3.952e-1379.31Armadillo repeat-containing kinesin-like protein 2... [more]
ARK1_ARATH4.130e-1261.76Armadillo repeat-containing kinesin-like protein 1... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_6G04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-6G04-M8-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674487 ID=CX674487; Name=CX674487; organism=Citrus sinensis; type=EST; length=802bp
CCCAAGTGTTAAGACATTTGCTCACTCACTATCCATTTTTCCTCACTCTC
TCATAATAGAAACCCTAGAAAAAAAATCGATCAGAAAAGCCACCATTCTG
CCATTCAAAACTCCACCATTTTGCCACCGTCCAAACCATCATTCTCAATT
GGGCACCCATTTCGCATTGTTTTTCAGTCTCTTTGTCCTTTTGCCACAAG
TTGTTCAGCGAACCCTCACCTTCGGTTCGATTCTTGCAAGTGCCTGGAAG
AGTTAGAGTGGCAGTGAGATTGCGACCATGAAATGAAGAAGAGACCGTAG
CAGATGTCGATTTTTCTGATTGTGTCGCGCTGCAGACAGAGGTGGTCTCA
TTCTCATTTTAATTGTTGAGTTTGTATGTGATTGTTAAAATTTCACTTTG
CTCTACCTCAGCTTAAGAGGTTAAAACTTTGAAAGAACAATTGGAACTCA
GACACTTATGAATTCGATGAAGTTTTTACTGAATCTGCATCACAGAAGCA
TGTTTGTGAAGTCGTTGCCAAGCCTATTGTGGAGGTCTGTTATGGTTGGT
ATAGTTGTCAATATTTTAACACCATTTTTCAATCCTACAATTTATGCTTC
ATTAAGTTTTTTTGTGGACATGGCATTATTTTTTTAGCTTCAAAATGGTA
GCAATATTCCTTTTAGGATATATCATGCCTTGTGTAGAAATCTCTGAAGA
GAAATTTGCTACAGGGCTTTCAAATTTCATTGTAAGCCACCAATTTTAAA
TATTTGTTCTTTAATTCTTATTTTCTTCCATTTTAACTTTTTAATTTTTA
TT
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