CX674456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674456 vs. ExPASy Swiss-Prot
Match: RH1_ORYSJ (DEAD-box ATP-dependent RNA helicase 1 OS=Oryza sativa subsp. japonica GN=Os02g0795900 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.815e-23 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = -2 Query: 631 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSGDV*FEEAFQ 876 V+NYD P Y+KTYIHRAGRTARAG+ G CFT L K EVK F K+L+KADN SC +HS+P +E+LRPV+ S EE+ + Sbjct: 415 VINYDMPPYVKTYIHRAGRTARAGESGSCFTFLRKHEVKAFDKMLKKADNSSCSLHSLPEESVETLRPVFSSALKKLEESLE 496
BLAST of CX674456 vs. ExPASy Swiss-Prot
Match: RH1_ARATH (DEAD-box ATP-dependent RNA helicase 1 OS=Arabidopsis thaliana GN=RH1 PE=2 SV=2) HSP 1 Score: 101.679 bits (252), Expect = 5.886e-21 Identity = 45/71 (63.38%), Postives = 56/71 (78.87%), Query Frame = -2 Query: 667 NVVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVY 879 NV+NYD P + KT+IHRAGRTARAGQ GRCFTLL EV+RF KLL+K +DSCPI+ IP + ++S+R Y Sbjct: 399 NVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATY 469
BLAST of CX674456 vs. ExPASy Swiss-Prot
Match: DDX51_HUMAN (ATP-dependent RNA helicase DDX51 OS=Homo sapiens GN=DDX51 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 1.717e-12 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = -2 Query: 637 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKSGDV*FEEA 876 VVNYD P Y++TY+HR GRTARAG+ G+ FTLL K + +RF ++L +A H + S L++ L P Y+ EE+ Sbjct: 577 VVNYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERRFLRMLTEAGAPELQRHELSSKLLQPLVPRYEEALSQLEES 656
BLAST of CX674456 vs. ExPASy Swiss-Prot
Match: DDX51_MOUSE (ATP-dependent RNA helicase DDX51 OS=Mus musculus GN=Ddx51 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.237e-11 Identity = 31/72 (43.06%), Postives = 48/72 (66.67%), Query Frame = -2 Query: 661 VVNYDKPAYIKTYIHRAGRTARAGQLGRCFTLLHKDEVKRFKKLLQKADNDSCPIHSIPSSLIESLRPVYKS 876 V+NYD P Y++TY+HR GRTARAG+ G+ FTLL K + ++F +++ +A H IP L++ L Y++ Sbjct: 550 VINYDAPQYLRTYVHRVGRTARAGKTGQAFTLLLKVQERKFLQMVSEAGVPELTHHEIPRKLLQPLVARYET 621 The following BLAST results are available for this feature:
BLAST of CX674456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674456 ID=CX674456; Name=CX674456; organism=Citrus sinensis; type=EST; length=880bpback to top |