CX674367

Overview
NameCX674367
Unique NameCX674367
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2492 contig Csv1_Contig2492:769..1658. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX674367 vs. ExPASy Swiss-Prot
Match: ISPH_CYAA5 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) GN=ispH PE=3 SV=1)

HSP 1 Score: 313.923 bits (803), Expect = 7.674e-85
Identity = 151/233 (64.81%), Postives = 190/233 (81.55%), Query Frame = -1
Query:  192 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 890
            YTSIIHGKY HEETVAT+SFAG Y++V N+KEA+YVCDYIL G        K+ FLEKFK A S+GFDPD DL+++GIANQTTMLK ETE+IGKL E TM++K+G   +NEHF+SFNTICDATQERQDAM  +VEE+VD+++V+GG+NSSNT+HLQEI+ ++GI SY IDS+KRI PGNKI +K +  ++  KENWLP G+I +G+TSGASTPDK VE V++++FE K    L
Sbjct:  175 YTSIIHGKYKHEETVATSSFAGTYLVVLNLKEAQYVCDYILNG------GNKDEFLEKFKNAHSEGFDPDKDLIRLGIANQTTMLKSETEQIGKLFETTMLKKYGPTELNEHFMSFNTICDATQERQDAMLNLVEEEVDVMVVIGGFNSSNTTHLQEISIEKGIDSYHIDSDKRILPGNKIEHKPLEKDIETKENWLPDGKIIVGVTSGASTPDKVVEAVIERIFEEKNAGVL 401          
BLAST of CX674367 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP4 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ispH PE=3 SV=1)

HSP 1 Score: 313.153 bits (801), Expect = 1.309e-84
Identity = 150/228 (65.79%), Postives = 187/228 (82.02%), Query Frame = -1
Query:  207 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 890
            YTSIIHGKY HEET+AT+S+A  Y+IV ++KEAEYVC+YIL G        +E FL KF+ A S  FDPD DLV+VGIANQTTMLKGETE+IGKL E+T+MRK+G + +N+HF+SFNTICDATQERQDAM+K+VE  +DL++V+GG+NSSNT+HLQEI+ +R IPSY IDS  RIGPGN++ +K +H  L  KENWLP+G I +GITSGASTPDK V DVL+K+F +K
Sbjct:  176 YTSIIHGKYQHEETIATSSYAATYLIVLDLKEAEYVCNYILNG------GDREEFLHKFRHAYSPDFDPDRDLVRVGIANQTTMLKGETEQIGKLFERTLMRKYGPDQINQHFLSFNTICDATQERQDAMFKLVEYPLDLMVVIGGFNSSNTTHLQEISIEREIPSYHIDSADRIGPGNRVEHKPLHRPLEIKENWLPEGPIVVGITSGASTPDKVVSDVLEKIFALK 397          
BLAST of CX674367 vs. ExPASy Swiss-Prot
Match: ISPH_THEEB (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=ispH PE=3 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.108e-83
Identity = 151/228 (66.23%), Postives = 185/228 (81.14%), Query Frame = -1
Query:  207 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIK 890
            +TSIIHGKY+HEET+AT+SFAG Y+IV N++EA YVCDYIL G        + AF+ KF KA S GFDPD DLV+VGIANQTTMLKGETE+IGKL E+TM++K+G + +NEHF+SFNTICDATQERQDAM  +V+E +DL++V+GG+NSSNT+HLQEIA + GIPSY IDS  RIGPGN+I +K +H      ENWLP   ITIGITSGASTPDK VE+VL K+F ++
Sbjct:  175 FTSIIHGKYNHEETIATSSFAGTYLIVLNLEEARYVCDYILHG------GDRAAFMAKFAKACSPGFDPDRDLVRVGIANQTTMLKGETEQIGKLFERTMIQKYGPDRLNEHFMSFNTICDATQERQDAMLSLVKEPLDLMVVIGGYNSSNTTHLQEIAIEHGIPSYHIDSADRIGPGNRIEHKPLHQNPTVAENWLPDRPITIGITSGASTPDKVVEEVLNKIFALR 396          
BLAST of CX674367 vs. ExPASy Swiss-Prot
Match: ISPH_ANAVT (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ispH PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.355e-81
Identity = 146/233 (62.66%), Postives = 188/233 (80.69%), Query Frame = -1
Query:  192 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 890
            +TSIIHGKY HEET+AT+SFAGKY+IV N+KEA+YV DYIL G        +E FL+KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL E TM++K+G   +N+HF SFNTICDATQERQDAM ++V+E +DL++V+GG+NSSNT+ LQ+I+++RG+PSY ID  +RI   N I ++ ++GELV  ENWLP G+I +G+TSGASTPDK VEDV++K+F +K   A+
Sbjct:  175 HTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYVADYILHGR------NREEFLQKFAKACSAGFDPDKDLERVGIANQTTMLKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSVNSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATTAV 401          
BLAST of CX674367 vs. ExPASy Swiss-Prot
Match: ISPH_ACAM1 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=ispH PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 1.355e-81
Identity = 144/234 (61.54%), Postives = 187/234 (79.91%), Query Frame = -1
Query:  195 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILG-GELNGSSSTKEA-FLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEA 890
            YTSIIHGKY HEET+AT+SFAG Y+++ N++EAEYV DYIL  G+       + A F+ KF  A S GFDP+ DL +VGIANQTTMLKGETE+IGKL E+T+MRK+G   VNEHF+SFNTICDATQERQDA++++V+E +DL++V+GG+NSSNT+HLQEI+ D+ IPSY IDS  RIGPGN++ +K ++ +L   +NWLP G + IG+TSGASTPDK V D+++K+F IK   A
Sbjct:  176 YTSIIHGKYKHEETIATSSFAGTYLVLLNLEEAEYVADYILNPGDTPSEREQRRADFMAKFANAHSPGFDPETDLERVGIANQTTMLKGETEQIGKLFERTVMRKYGPAQVNEHFLSFNTICDATQERQDAIFQLVDEPLDLMVVIGGFNSSNTTHLQEISIDKNIPSYHIDSVDRIGPGNRVEHKPLNADLTVTDNWLPNGPLAIGVTSGASTPDKVVSDIVEKIFSIKSASA 409          
BLAST of CX674367 vs. ExPASy Swiss-Prot
Match: ISPH_ANASP (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=ispH PE=3 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 2.311e-81
Identity = 146/233 (62.66%), Postives = 188/233 (80.69%), Query Frame = -1
Query:  192 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 890
            +TSIIHGKY HEET+AT+SFAGKY+IV N+KEA+YV DYIL G        +E FL+KF KA S GFDPD DL +VGIANQTTMLKGETE+IGKL E TM++K+G   +N+HF SFNTICDATQERQDAM ++V+E +DL++V+GG+NSSNT+ LQ+I+++RG+PSY ID  +RI   N I ++ ++GELV  ENWLP G+I +G+TSGASTPDK VEDV++K+F +K   A+
Sbjct:  175 HTSIIHGKYKHEETIATSSFAGKYLIVLNLKEAQYVADYILHG------GNREEFLQKFAKACSAGFDPDRDLERVGIANQTTMLKGETEQIGKLFEHTMLQKYGPVELNQHFQSFNTICDATQERQDAMLELVQENLDLMIVIGGFNSSNTTQLQQISQERGLPSYHIDVVERIKSINSIEHRQLNGELVTTENWLPAGKIVVGVTSGASTPDKVVEDVIEKIFALKATAAV 401          
BLAST of CX674367 vs. ExPASy Swiss-Prot
Match: ISPH_SYNP6 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=ispH PE=3 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.941e-81
Identity = 141/229 (61.57%), Postives = 190/229 (82.97%), Query Frame = -1
Query:  204 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 890
            +TSIIHGKY+HEETVAT+SFA  Y++V N+++A+YVCDYIL G        ++ F+ +F KA S GFDPD DL ++GIANQTTMLK ETE IGKL E+T+++K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L   E WLP G +TIGITSGASTPDK VEDV++++F+++R
Sbjct:  175 HTSIIHGKYNHEETVATSSFAETYLVVLNLEQAQYVCDYILNG------GDRDEFMTRFGKACSAGFDPDRDLERIGIANQTTMLKSETEAIGKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397          
BLAST of CX674367 vs. ExPASy Swiss-Prot
Match: ISPH_SYNE7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=ispH PE=3 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.941e-81
Identity = 141/229 (61.57%), Postives = 190/229 (82.97%), Query Frame = -1
Query:  204 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKR 890
            +TSIIHGKY+HEETVAT+SFA  Y++V N+++A+YVCDYIL G        ++ F+ +F KA S GFDPD DL ++GIANQTTMLK ETE IGKL E+T+++K+G + +N+HF++FNTICDATQERQDAM+++VEE +DLI+V+GG+NSSNT+HLQEIA +R IPS+ ID+ +RIGPGN+I +K +H +L   E WLP G +TIGITSGASTPDK VEDV++++F+++R
Sbjct:  175 HTSIIHGKYNHEETVATSSFAETYLVVLNLEQAQYVCDYILNG------GDRDEFMTRFGKACSAGFDPDRDLERIGIANQTTMLKSETEAIGKLFERTLLKKYGPQALNDHFLAFNTICDATQERQDAMFQLVEEPLDLIVVIGGFNSSNTTHLQEIAIERQIPSFHIDAAERIGPGNRIEHKPLHTDLTTTEPWLPAGPLTIGITSGASTPDKVVEDVIERLFDLQR 397          
BLAST of CX674367 vs. ExPASy Swiss-Prot
Match: ISPH_CYAP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7424) GN=ispH PE=3 SV=1)

HSP 1 Score: 295.819 bits (756), Expect = 2.163e-79
Identity = 148/233 (63.52%), Postives = 182/233 (78.11%), Query Frame = -1
Query:  192 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 890
            YTSIIHGKY HEETVAT+SFAG Y++V NM++A+YVC+YIL G        K+ FL KFKKA S+GFDPD DL +VGIANQTTMLK ETEEIGKL E TM++K+G  ++N HF+SFNTICDATQERQDAM  +V+EK+DL++V+GG+NSSNT+HLQEI+   GI SY IDS  RI   N I +K +  +L  KENWLP G+I +G+TSGASTPD  VE VL+K+F IK   A+
Sbjct:  175 YTSIIHGKYKHEETVATSSFAGTYLVVLNMEQAKYVCNYILNG------GDKQEFLAKFKKAYSEGFDPDTDLERVGIANQTTMLKSETEEIGKLFEHTMLKKYGPLDLNNHFMSFNTICDATQERQDAMLDLVKEKLDLMVVIGGFNSSNTTHLQEISIHHGIVSYHIDSAARIDLNNHIEHKPLGKDLEVKENWLPDGKIVVGVTSGASTPDIVVEQVLQKIFAIKSAVAM 401          
BLAST of CX674367 vs. ExPASy Swiss-Prot
Match: ISPH_NOSP7 (4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ispH PE=3 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.825e-79
Identity = 144/233 (61.80%), Postives = 185/233 (79.40%), Query Frame = -1
Query:  192 YTSIIHGKYSHEETVATASFAGKYIIVKNMKEAEYVCDYILGGELNGSSSTKEAFLEKFKKAVSKGFDPDVDLVKVGIANQTTMLKGETEEIGKLVEKTMMRKFGVENVNEHFISFNTICDATQERQDAMYKMVEEKVDLILVVGGWNSSNTSHLQEIAEDRGIPSYWIDSEKRIGPGNKIAYKLMHGELVEKENWLPKGQITIGITSGASTPDKAVEDVLKKVFEIKREEAL 890
            YTSIIHGKY HEETVAT+SFAGKY+IV N++EA+YV DYI+ G        +E FL KF KA S GFDPD DL +VGIANQTTMLK ETE+IGKL E+TM++K+    +N+HF SFNTICDATQERQDAM ++VE  ++L++V+GG+NSSNT+ LQ+IA +R IPSY ID+ +RI  G+ I ++ ++G+L+  ENWLP G+I +GITSGASTPDK VEDV++K+F +K   AL
Sbjct:  175 YTSIIHGKYKHEETVATSSFAGKYLIVLNLQEAQYVADYIING------GNREEFLTKFAKACSAGFDPDRDLERVGIANQTTMLKDETEQIGKLFERTMLQKYSPIELNQHFQSFNTICDATQERQDAMLELVEHNLNLMVVIGGFNSSNTTQLQQIAFERRIPSYHIDTVERIKSGDSIEHRQLNGQLITTENWLPDGEIVVGITSGASTPDKVVEDVIEKIFAVKATAAL 401          
The following BLAST results are available for this feature:
BLAST of CX674367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
ISPH_CYAA57.674e-8564.814-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAP41.309e-8465.794-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_THEEB1.108e-8366.234-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ANAVT1.355e-8162.664-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ACAM11.355e-8161.544-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_ANASP2.311e-8162.664-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNP63.941e-8161.574-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_SYNE73.941e-8161.574-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_CYAP72.163e-7963.524-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
ISPH_NOSP72.825e-7961.804-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_6A06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-6A06-A12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674367 ID=CX674367; Name=CX674367; organism=Citrus sinensis; type=EST; length=890bp
TTTTTTTTTTTTTTTTTAGAAATTGTAATCTCTAGCTTCATATTGCACAA
AAAATATAAATTTCAGATTACATGGGCACTGATAAAAGACCCGGCAGAGG
GCTGTGTTTATAATTTTACAATATCTAGTGATACAATCACATCGAAATTT
ATTGATAATGTGTATGTTTGGACCTCAGTTTACGCTAATTGCAAGGCTTC
TTCACGCTTGATCTCAAATACCTTTTTAAGGACGTCTTCAACAGCCTTAT
CTGGGGTGGAGGCACCGGATGTTATACCGATTGTGATCTGGCCTTTCGGC
AGCCAATTTTCTTTCTCCACCAGCTCACCATGCATCAATTTATATGCTAT
TTTGTTTCCGGGACCTATTCTCTTCTCACTATCGATCCAGTATGAGGGAA
TTCCACGGTCTTCTGCAATCTCTTGAAGGTGTGAGGTATTGCTCGAGTTC
CACCCACCAACAACCAAGATAAGATCGACCTTTTCCTCAACCATCTTATA
CATTGCATCTTGTCGCTCTTGTGTAGCATCACAAATTGTGTTGAAGCTTA
TGAAGTGTTCATTGACATTTTCAACTCCAAATTTACGCATCATGGTCTTC
TCGACTAGTTTTCCAATCTCTTCTGTTTCACCCTTGAGCATTGTAGTTTG
GTTTGCAATGCCAACTTTTACCAGGTCAACATCTGGATCAAACCCTTTTG
AAACAGCTTTCTTGAATTTCTCAAGGAATGCTTCTTTTGTTGAGCTAGAT
CCATTAAGTTCACCCCCAAGAATGTAATCACACACATACTCAGCCTCTTT
CATATTCTTGACTATGATATACTTTCCTGCAAACGATGCAGTTGCTACAG
TTTCCTCATGAGAATATTTACCGTGAATAATTGAAGTGTA
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