EY665504

Overview
NameEY665504
Unique NameEY665504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY665504 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.806e-41
Identity = 43/78 (55.13%), Postives = 55/78 (70.51%), Query Frame = 3 
Query:  243 TPNLHIATVGSIAFYGIWNDFSGFIIPRTTIPIWGRWNYWANPIAWTLHGLAASPFGDIDYPRLESGDTLKPVLTTLF 476
            TPN HIA+V S AFYGIWN FSGF+IPR ++P+W  W YW  P+AWTL+GL AS FGDI  P  +S  ++K  +   +
Sbjct: 1309 TPNHHIASVVSSAFYGIWNLFSGFLIPRPSMPVWWEWYYWLCPVAWTLYGLIASQFGDITEPMADSNMSVKQFIREFY 1386

HSP 2 Score: 67.3958 bits (163), Expect = 5.806e-41
Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 2 
Query:   89 PHVFVQAVVYGVIVYAMIRFEWTAVKFIWYIXXXXXXXXXXXXYGMMCVAM 241
            P+V VQA+VYG+IVYAMI FEWTAVKF WY+            YGMM VAM
Sbjct: 1258 PYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAM 1308

HSP 3 Score: 43.5134 bits (101), Expect = 5.806e-41
Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 1 
Query:    7 RGAFYREKAAGMYSSMAYAFAQVLIE 84
            R  FYRE+AAGMYS+M YAFAQV IE
Sbjct: 1231 RTVFYREQAAGMYSAMPYAFAQVFIE 1256
[Close]
BLAST of EY665504 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.906e-38
Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = 3 
Query:  243 TPNLHIATVGSIAFYGIWNDFSGFIIPRTTIPIWGRWNYWANPIAWTLHGLAASPFGDIDYPRLESGDTLKPVLTTLF 476
            TPN HIA++ S AFY IWN FSGF+IPR  +PIW RW  WA P+AWTL+GL  S FGDI+ P +E G  +K  +   F
Sbjct: 1344 TPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETP-MEDGTPVKVFVENYF 1420

HSP 2 Score: 61.2326 bits (147), Expect = 6.906e-38
Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 2 
Query:   89 PHVFVQAVVYGVIVYAMIRFEWTAVKFIWYIXXXXXXXXXXXXYGMMCVAM 241
            P+  VQA VYG+IVYAMI FEWTA KF WY+            YGMM V +
Sbjct: 1293 PYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGL 1343

HSP 3 Score: 40.817 bits (94), Expect = 6.906e-38
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 1 
Query:    7 RGAFYREKAAGMYSSMAYAFAQVLIE 84
            R  FYRE+AAGMYS+  YAF QV+IE
Sbjct: 1266 RTVFYRERAAGMYSAFPYAFGQVVIE 1291
[Close]
BLAST of EY665504 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.906e-38
Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = 3 
Query:  243 TPNLHIATVGSIAFYGIWNDFSGFIIPRTTIPIWGRWNYWANPIAWTLHGLAASPFGDIDYPRLESGDTLKPVLTTLF 476
            TPN HIA++ S AFY IWN FSGF+IPR  +PIW RW  WA P+AWTL+GL  S FGDI+ P +E G  +K  +   F
Sbjct: 1344 TPNYHIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIETP-MEDGTPVKVFVENYF 1420

HSP 2 Score: 61.2326 bits (147), Expect = 6.906e-38
Identity = 27/51 (52.94%), Postives = 31/51 (60.78%), Query Frame = 2 
Query:   89 PHVFVQAVVYGVIVYAMIRFEWTAVKFIWYIXXXXXXXXXXXXYGMMCVAM 241
            P+  VQA VYG+IVYAMI FEWTA KF WY+            YGMM V +
Sbjct: 1293 PYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFTFYGMMAVGL 1343

HSP 3 Score: 40.817 bits (94), Expect = 6.906e-38
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 1 
Query:    7 RGAFYREKAAGMYSSMAYAFAQVLIE 84
            R  FYRE+AAGMYS+  YAF QV+IE
Sbjct: 1266 RTVFYRERAAGMYSAFPYAFGQVVIE 1291
[Close]
BLAST of EY665504 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 7.307e-37
Identity = 42/78 (53.85%), Postives = 56/78 (71.79%), Query Frame = 3 
Query:  243 TPNLHIATVGSIAFYGIWNDFSGFIIPRTTIPIWGRWNYWANPIAWTLHGLAASPFGDIDYPRLESGDTLKPVLTTLF 476
            TPN ++A++ +  FYG+WN FSGFIIPR  +P+W RW YWANP+AWTL+GL AS FGDI   +L   +T++  L   F
Sbjct: 1321 TPNQNVASIVAAFFYGVWNLFSGFIIPRPRMPVWWRWYYWANPVAWTLYGLVASQFGDIQ-TKLSDNETVEQFLRRYF 1397

HSP 2 Score: 58.151 bits (139), Expect = 7.307e-37
Identity = 26/51 (50.98%), Postives = 32/51 (62.75%), Query Frame = 2 
Query:   89 PHVFVQAVVYGVIVYAMIRFEWTAVKFIWYIXXXXXXXXXXXXYGMMCVAM 241
            P++FVQ+V YG+IVYAMI FEW   KF WY+            YGMM VA+
Sbjct: 1270 PYIFVQSVFYGIIVYAMIGFEWDVGKFFWYLFIMFFTLLYFTFYGMMGVAV 1320

HSP 3 Score: 40.0466 bits (92), Expect = 7.307e-37
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 1 
Query:    7 RGAFYREKAAGMYSSMAYAFAQVLIE 84
            R  FYRE+AAGMYS++ YAF QV IE
Sbjct: 1243 RTVFYRERAAGMYSAIPYAFGQVSIE 1268
[Close]
BLAST of EY665504 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.234e-36
Identity = 40/74 (54.05%), Postives = 49/74 (66.22%), Query Frame = 3 
Query:  243 TPNLHIATVGSIAFYGIWNDFSGFIIPRTTIPIWGRWNYWANPIAWTLHGLAASPFGDIDYPRLESGDTLKPVL 464
            TPN  IA + + AFY IWN F+GFIIPR  IPIW RW YWA P+AWTL+GL  S FG+      +  +T+K  L
Sbjct: 1327 TPNSDIAAIVAAAFYAIWNIFAGFIIPRPRIPIWWRWYYWACPVAWTLYGLVVSQFGEYTDTMSDVDETVKDFL 1400

HSP 2 Score: 61.6178 bits (148), Expect = 1.234e-36
Identity = 25/51 (49.02%), Postives = 34/51 (66.67%), Query Frame = 2 
Query:   89 PHVFVQAVVYGVIVYAMIRFEWTAVKFIWYIXXXXXXXXXXXXYGMMCVAM 241
            PH+ VQ ++YG++VY+MI F+WTA KF+WY+            YGMM VAM
Sbjct: 1276 PHILVQTLLYGLLVYSMIGFDWTAAKFLWYMFFMFFTFLYFTYYGMMAVAM 1326

HSP 3 Score: 44.2838 bits (103), Expect = 1.234e-36
Identity = 20/26 (76.92%), Postives = 23/26 (88.46%), Query Frame = 1 
Query:    7 RGAFYREKAAGMYSSMAYAFAQVLIE 84
            R  FYREKAAGMYS++ YA+AQVLIE
Sbjct: 1249 RTVFYREKAAGMYSALPYAYAQVLIE 1274
[Close]
BLAST of EY665504 vs. ExPASy Swiss-Prot
Match: PDR2_ORYSJ (Probable pleiotropic drug resistance protein 2 OS=Oryza sativa subsp. japonica GN=PDR2 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.718e-36
Identity = 43/78 (55.13%), Postives = 54/78 (69.23%), Query Frame = 3 
Query:  243 TPNLHIATVGSIAFYGIWNDFSGFIIPRTTIPIWGRWNYWANPIAWTLHGLAASPFGDIDYPRLESGDTLKPVLTTLF 476
            TP+ H+A++ S AFYGIWN FSGFIIPR  +PIW RW  W  P+AWTL+GL AS FGDI  P ++ G  +K  +   F
Sbjct: 1351 TPSYHVASIVSSAFYGIWNLFSGFIIPRPKVPIWWRWYCWICPVAWTLYGLVASQFGDIMTP-MDDGTPVKIFVENYF 1427

HSP 2 Score: 58.5362 bits (140), Expect = 7.718e-36
Identity = 25/57 (43.86%), Postives = 35/57 (61.40%), Query Frame = 2 
Query:   89 PHVFVQAVVYGVIVYAMIRFEWTAVKFIWYIXXXXXXXXXXXXYGMMCVAMDAKPTY 259
            P+  VQ+++YG+IVY+MI F+WTA KF WY+            YGMM V +   P+Y
Sbjct: 1300 PYTLVQSIIYGIIVYSMIGFKWTAAKFFWYLFFMFFTFLYFTFYGMMAVGL--TPSY 1354

HSP 3 Score: 40.0466 bits (92), Expect = 7.718e-36
Identity = 18/26 (69.23%), Postives = 20/26 (76.92%), Query Frame = 1 
Query:    7 RGAFYREKAAGMYSSMAYAFAQVLIE 84
            R  FYRE+AAGMYS+  YAF QV IE
Sbjct: 1273 RTVFYRERAAGMYSAFPYAFGQVAIE 1298
[Close]
BLAST of EY665504 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.450e-33
Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 3 
Query:  243 TPNLHIATVGSIAFYGIWNDFSGFIIPRTTIPIWGRWNYWANPIAWTLHGLAASPFGDIDYPRLESGDT 449
            TPN  IA + S AFY +WN FSG++IPR  IP+W RW  W  P+AWTL+GL AS FGDI +  +  GDT
Sbjct: 1336 TPNESIAAIISSAFYNVWNLFSGYLIPRPKIPVWWRWYCWICPVAWTLYGLVASQFGDIQH--VLEGDT 1402

HSP 2 Score: 58.5362 bits (140), Expect = 1.450e-33
Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 2 
Query:   89 PHVFVQAVVYGVIVYAMIRFEWTAVKFIWYIXXXXXXXXXXXXYGMMCVAM 241
            P++ VQ ++YGV+VY+MI FEWT  KF+WY+            YGMM V +
Sbjct: 1285 PYIMVQTLIYGVLVYSMIGFEWTVAKFLWYLFFMYFTLLYFTFYGMMAVGL 1335

HSP 3 Score: 40.0466 bits (92), Expect = 1.450e-33
Identity = 18/26 (69.23%), Postives = 20/26 (76.92%), Query Frame = 1 
Query:    7 RGAFYREKAAGMYSSMAYAFAQVLIE 84
            R  FYRE+AAGMYS+  YAF QV IE
Sbjct: 1258 RTVFYRERAAGMYSAFPYAFGQVAIE 1283
[Close]
BLAST of EY665504 vs. ExPASy Swiss-Prot
Match: PDR1_ORYSJ (Probable pleiotropic drug resistance protein 1 OS=Oryza sativa subsp. japonica GN=PDR1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.084e-31
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 3 
Query:  243 TPNLHIATVGSIAFYGIWNDFSGFIIPRTTIPIWGRWNYWANPIAWTLHGLAASPFGDIDYP 428
            TP+ H+A++ S AFY IWN F+GF+I R   P+W RW  W  P+AWTL+GL  S +GDI  P
Sbjct: 1355 TPSYHVASIVSSAFYAIWNLFTGFVISRPATPVWWRWYCWICPVAWTLYGLIVSQYGDIVTP 1416

HSP 2 Score: 55.4546 bits (132), Expect = 2.084e-31
Identity = 24/57 (42.11%), Postives = 33/57 (57.89%), Query Frame = 2 
Query:   89 PHVFVQAVVYGVIVYAMIRFEWTAVKFIWYIXXXXXXXXXXXXYGMMCVAMDAKPTY 259
            P+  VQ+V+Y +IVY+MI F+WT  KF WY+            YGMM V +   P+Y
Sbjct: 1304 PYTLVQSVIYSIIVYSMIGFQWTVAKFFWYLFFMFFTLLYFTFYGMMAVGL--TPSY 1358

HSP 3 Score: 40.817 bits (94), Expect = 2.084e-31
Identity = 18/26 (69.23%), Postives = 21/26 (80.77%), Query Frame = 1 
Query:    7 RGAFYREKAAGMYSSMAYAFAQVLIE 84
            R  FYRE+AAGMYS++ YAF QV IE
Sbjct: 1277 RTVFYRERAAGMYSALPYAFGQVAIE 1302
[Close]
BLAST of EY665504 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.700e-31
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 3 
Query:  243 TPNLHIATVGSIAFYGIWNDFSGFIIPRTTIPIWGRWNYWANPIAWTLHGLAASPFGDIDYPRL 434
            TPN  +A + +  FY +WN F GF+IPR  IP W RW YWANP++WTL+GL  S FGD+D P L
Sbjct: 1332 TPNHTVAPIIAAPFYTLWNLFCGFMIPRKRIPAWWRWYYWANPVSWTLYGLLTSQFGDLDQPLL 1395

HSP 2 Score: 55.0694 bits (131), Expect = 7.700e-31
Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 2 
Query:   89 PHVFVQAVVYGVIVYAMIRFEWTAVKFIWYIXXXXXXXXXXXXYGMMCVAMDAKPT 256
            P++ VQ+++YG I Y++  FEWTAVKF+WY+            YGMM  A+    T
Sbjct: 1281 PYILVQSLIYGTIFYSLGSFEWTAVKFLWYLFFMYFTLLYFTFYGMMTTAITPNHT 1336

HSP 3 Score: 33.113 bits (74), Expect = 7.700e-31
Identity = 13/22 (59.09%), Postives = 19/22 (86.36%), Query Frame = 1 
Query:   19 YREKAAGMYSSMAYAFAQVLIE 84
            YRE+AAGMYS++ +AF+ V +E
Sbjct: 1258 YRERAAGMYSALPFAFSLVTVE 1279
[Close]
BLAST of EY665504 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.520e-29
Identity = 32/60 (53.33%), Postives = 43/60 (71.67%), Query Frame = 3 
Query:  243 TPNLHIATVGSIAFYGIWNDFSGFIIPRTTIPIWGRWNYWANPIAWTLHGLAASPFGDID 422
            TPN  +A++ + AFYGI+N FSGF IPR  IP W  W YW  P+AWT++GL  S +GD++
Sbjct: 1351 TPNQQVASIFASAFYGIFNLFSGFFIPRPKIPKWWIWYYWICPVAWTVYGLIVSQYGDVE 1410

HSP 2 Score: 52.7582 bits (125), Expect = 6.520e-29
Identity = 22/51 (43.14%), Postives = 30/51 (58.82%), Query Frame = 2 
Query:   89 PHVFVQAVVYGVIVYAMIRFEWTAVKFIWYIXXXXXXXXXXXXYGMMCVAM 241
            P+V +Q V Y +IVYAM+ FEW A KF W++            YGMM V++
Sbjct: 1300 PYVLIQTVYYSLIVYAMVGFEWKAEKFFWFVFVSYFSFLYWTYYGMMTVSL 1350

HSP 3 Score: 38.1206 bits (87), Expect = 6.520e-29
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 1 
Query:    7 RGAFYREKAAGMYSSMAYAFAQVLIE 84
            R  FYRE+AAGMYS+M YA +QV  E
Sbjct: 1273 RTVFYRERAAGMYSAMPYAISQVTCE 1298
The following BLAST results are available for this feature:
BLAST of EY665504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
AB40G_ARATH5.806e-4155.13ABC transporter G family member 40 OS=Arabidopsis ... [more]
PDR3_ORYSJ6.906e-3856.41Pleiotropic drug resistance protein 3 OS=Oryza sat... [more]
PDR3_ORYSI6.906e-3856.41Pleiotropic drug resistance protein 3 OS=Oryza sat... [more]
PDR1_TOBAC7.307e-3753.85Pleiotropic drug resistance protein 1 OS=Nicotiana... [more]
TUR2_SPIPO1.234e-3654.05Pleiotropic drug resistance protein TUR2 OS=Spirod... [more]
PDR2_ORYSJ7.718e-3655.13Probable pleiotropic drug resistance protein 2 OS=... [more]
PDR4_ORYSJ1.450e-3356.52Pleiotropic drug resistance protein 4 OS=Oryza sat... [more]
PDR1_ORYSJ2.084e-3153.23Probable pleiotropic drug resistance protein 1 OS=... [more]
PDR6_ORYSJ7.700e-3156.25Pleiotropic drug resistance protein 6 OS=Oryza sat... [more]
AB36G_ARATH6.520e-2953.33ABC transporter G family member 36 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-001-A08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665504 ID=EY665504; Name=EY665504; organism=Citrus sinensis; type=EST; length=836bp
CGGACGCGTGGGGCCTTCTACAGAGAAAAAGCTGCTGGAATGTATTCATC
TATGGCGTATGCGTTCGCACAAGTTCTAATTGAGAAGTCCCCATGTATTT
GTTCAAGCTGTAGTTTATGGTGTTATAGTCTATGCCATGATCCGATTTGA
ATGGACTGCTGTAAAGTTCATTTGGTATATATTCTTCATGTTCTGGAGCT
TTTTGCTCTTCACCTTCTATGGCATGATGTGTGTTGCTATGGACGCCAAA
CCTACATATTGCAACCGTTGGTTCAATTGCATTTTATGGAATATGGAACG
ACTTTTCGGGGTTTATTATCCCGAGAACAACGATTCCAATATGGGGGAGA
TGGAACTACTGGGCAAACCCTATAGCTTGGACATTGCATGGATTGGCTGC
ATCACCCTTTGGAGATATAGACTACCCAAGACTTGAGTCAGGTGACACAC
TGAAACCGGTTTTGACAACTTTATTTTGGTCTTAAACATGGATTTTCTAA
GAGTCACTGCCGGGTGGTGCTGGTGCGATTCACAGTGCTCGTTCACGTTT
GACCTTTGCCTCTTGGAAAATAAACGCATTCCGATTTCCGGGAGAACCCA
ATCGAAGGTTAATTATGGTCGTTGAACCAGAACGGCTTTGAAATGTAGTG
AGACAAAATTGGACACTGGCGAATATGGTAATATAGTTGGAGACGGAGGG
CCAAACATATTACGTGGTATGCAGATAGGGAGGATGTACAAAAGAACATT
GCACCGCACAACTAACCCAGAGCATAGGACGACCCTGTCGCCTACAGCGT
CGCCTGCTTTACAGGCCCCGTGCGCGAAATAAAACT
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