CX674333

Overview
NameCX674333
Unique NameCX674333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length810
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674333 vs. ExPASy Swiss-Prot
Match: CDC20_DICDI (Anaphase-promoting complex subunit cdc20 OS=Dictyostelium discoideum GN=cdc20 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.497e-16
Identity = 60/201 (29.85%), Postives = 92/201 (45.77%), Query Frame = 3
Query:  279 NSKENLDRFIPNRSAMDFDYAHYMVTEGRKDKE-----NNQAMSVCSPSKEA---------YRKQLA-EVFNMN----RTRILAFKNKPP-----TPVELIPEMHXXXXXXXXXVQQAKLNKPRRHIPQSSERTLDAPXXXXXXXXXXXXWGSSNVLAIALGSTVYLWDASDGTTSELVTVDDENGPVTSVNWAPDGRHIA 809
            N     DRFIPN+  M+ D  H+ +T+   +       NN + S  + +  +         Y+  LA ++F  N     ++IL+FK+K P     +    +  ++           Q+ L K  R IPQ  ER LDAP            W S NV+AI LG TVYLW+A+      L  V+ ++  +TS+ W  DG ++A
Sbjct:   42 NGNNGGDRFIPNK--MNIDIGHFNLTKENSNPNPNAINNNSSTSTSTTATSSTTNNIESTLYKDTLANQLFESNSGDLESKILSFKSKAPVGNVSSSTNSLRVLYSQNQVGSTPTDQS-LKKQFRQIPQQPERILDAPDIVDDYYLNLLDWSSQNVIAIPLGQTVYLWNATTSEIQRLFQVEQQDDYITSLQWTKDGNYLA 239          
BLAST of CX674333 vs. ExPASy Swiss-Prot
Match: CDC20_PIG (Cell division cycle protein 20 homolog OS=Sus scrofa GN=CDC20 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.229e-15
Identity = 54/184 (29.35%), Postives = 86/184 (46.74%), Query Frame = 3
Query:  267 LQRKNSKENLDRFIPNRSAMDFDYAHYMVTEGRKDKENNQAMSVCSPSKEAYRKQLA---EVFNMNRTRILAFKNKPPTPVELIPEMHXXXXXXXXXVQQAKLNKPRRHIPQSSERTLDAPXXXXXXXXXXXXWGSSNVLAIALGSTVYLWDASDGTTSELVTVDDENGPVTSVNWAPDGRHIA 809
            +Q   SK   DR+IP+RSA   + A +++++       NQ  +  +P+K+ ++K  A     F++   +IL    KP    E     +                K  R+IP   +R LDAP            W S NVLA+AL ++VYLW AS G   +L+ ++     V+SV W  +G ++A
Sbjct:   67 MQTTPSKPGGDRYIPHRSASQMEVASFLLSK------ENQPDNSQTPTKKEHQKAWALNLNGFDVEEAKILRLSGKPQNAPE--GYQNRLKVLYSQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGDYVSSVAWIKEGNYLA 242          
BLAST of CX674333 vs. ExPASy Swiss-Prot
Match: CDC20_HUMAN (Cell division cycle protein 20 homolog OS=Homo sapiens GN=CDC20 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 54/184 (29.35%), Postives = 87/184 (47.28%), Query Frame = 3
Query:  267 LQRKNSKENLDRFIPNRSAMDFDYAHYMVTEGRKDKENNQAMSVCSPSKEAYRKQLA---EVFNMNRTRILAFKNKPPTPVELIPEMHXXXXXXXXXVQQAKLNKPRRHIPQSSERTLDAPXXXXXXXXXXXXWGSSNVLAIALGSTVYLWDASDGTTSELVTVDDENGPVTSVNWAPDGRHIA 809
            +Q   SK   DR+IP+RSA   + A +++++     EN+Q     +P+K+ ++K  A     F++   +IL    KP    E     +                K  R+IP   +R LDAP            W S NVLA+AL ++VYLW AS G   +L+ ++     ++SV W  +G ++A
Sbjct:   67 VQTTPSKPGGDRYIPHRSAAQMEVASFLLSK-ENQPENSQ-----TPTKKEHQKAWALNLNGFDVEEAKILRLSGKPQNAPE--GYQNRLKVLYSQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA 242          
BLAST of CX674333 vs. ExPASy Swiss-Prot
Match: CDC20_RAT (Cell division cycle protein 20 homolog OS=Rattus norvegicus GN=Cdc20 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.093e-14
Identity = 52/184 (28.26%), Postives = 84/184 (45.65%), Query Frame = 3
Query:  267 LQRKNSKENLDRFIPNRSAMDFDYAHYMVTEGRKDKENNQAMSVCSPSKEAYRKQLAEV---FNMNRTRILAFKNKPPTPVELIPEMHXXXXXXXXXVQQAKLNKPRRHIPQSSERTLDAPXXXXXXXXXXXXWGSSNVLAIALGSTVYLWDASDGTTSELVTVDDENGPVTSVNWAPDGRHIA 809
            +Q   SK   DR+IP RSA   + A +++++       NQ     +P+K+ ++K  A     F++   +IL    KP    E     +                K  R+IP   +R LDAP            W S NVLA+AL ++VYLW+A  G   +L+ ++     ++SV W  +G ++A
Sbjct:   67 VQTTPSKPGGDRYIPQRSASQMEVASFLLSK------ENQPEDGGTPTKKEHQKAWARNLNGFDVEEAKILRLSGKPQNAPE--GYQNRLKVLYSQKATPGSSRKACRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWNAGSGDILQLLQMEQPGDYISSVAWIKEGNYLA 242          
BLAST of CX674333 vs. ExPASy Swiss-Prot
Match: CDC20_MOUSE (Cell division cycle protein 20 homolog OS=Mus musculus GN=Cdc20 PE=1 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 2.093e-14
Identity = 52/184 (28.26%), Postives = 84/184 (45.65%), Query Frame = 3
Query:  267 LQRKNSKENLDRFIPNRSAMDFDYAHYMVTEGRKDKENNQAMSVCSPSKEAYRKQLA---EVFNMNRTRILAFKNKPPTPVELIPEMHXXXXXXXXXVQQAKLNKPRRHIPQSSERTLDAPXXXXXXXXXXXXWGSSNVLAIALGSTVYLWDASDGTTSELVTVDDENGPVTSVNWAPDGRHIA 809
            +Q   SK   DRFIP RSA   + A +++++       NQ     +P+K+ ++K  +     F++   +IL    KP    E     +                K  R+IP   +R LDAP            W S NVLA+AL ++VYLW+A  G   +L+ ++     ++SV W  +G ++A
Sbjct:   67 VQTTPSKPGGDRFIPQRSASQMEVASFLLSK------ENQPEDRGTPTKKEHQKAWSLNLNGFDVEEAKILRLSGKPQNAPE--GYQNRLKVLYSQKATPGSSRKTCRYIPSLPDRILDAPEIRNDYYLNLVDWSSGNVLAVALDNSVYLWNAGSGDILQLLQMEQPGDYISSVAWIKEGNYLA 242          
The following BLAST results are available for this feature:
BLAST of CX674333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
CDC20_DICDI8.497e-1629.85Anaphase-promoting complex subunit cdc20 OS=Dictyo... [more]
CDC20_PIG3.229e-1529.35Cell division cycle protein 20 homolog OS=Sus scro... [more]
CDC20_HUMAN4.217e-1529.35Cell division cycle protein 20 homolog OS=Homo sap... [more]
CDC20_RAT2.093e-1428.26Cell division cycle protein 20 homolog OS=Rattus n... [more]
CDC20_MOUSE2.093e-1428.26Cell division cycle protein 20 homolog OS=Mus musc... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_5G10_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5G10-M19-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674333 ID=CX674333; Name=CX674333; organism=Citrus sinensis; type=EST; length=810bp
TTGCAAACAAGAACAAGTTTCACTCACTGTTCATAATCATTCATATAATC
TGTTGTTTACGTGTATTTGTATCGTGCTTGTTTTTCTTTTCGGTATCTTT
GATCTGACTCTTTGTTTTGCAGGCTCGGTTTGTATAATTTCTTTAGTTTG
TGTTTGTTTTTATATTTCTATTTTCTCTATTATTTTGTTTTTGCTTTGTT
TCTGCAAACATTATGGATGCAGGGTCTATGAAAGCCGAATCTAGATGCCC
ACTTCAAGAACAGTTTCTTCAGAGAAAGAACTCCAAAGAAAATTTGGATA
GATTTATACCAAACCGGTCAGCCATGGACTTTGATTATGCTCATTACATG
GTAACCGAAGGGAGGAAGGACAAAGAGAATAACCAGGCTATGTCTGTGTG
CTCACCATCAAAGGAGGCTTATAGGAAGCAACTGGCGGAGGTTTTTAACA
TGAACAGAACTCGAATTCTCGCTTTCAAGAACAAGCCACCAACACCCGTT
GAACTTATCCCGGAAATGCATTCCTCTTCTGCTTCAGCTTCTTCGTCCGT
TCAGCAGGCTAAACTCAACAAGCCTCGCCGGCACATACCTCAGAGCTCTG
AGAGGACATTAGATGCGCCTGACCTTGTAGATGATTACTACCTCAACTTG
TTGGATTGGGGCAGCAGCAATGTCCTTGCAATAGCACTTGGAAGTACAGT
TTATCTTTGGGATGCATCGGACGGTACAACATCAGAACTTGTGACAGTCG
ATGACGAAAACGGCCCTGTTACAAGTGTCAATTGGGCTCCTGATGGACGC
CATATTGCCA
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