CX674329

Overview
NameCX674329
Unique NameCX674329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VPS33_ARATH (Vacuolar protein sorting-associated protein 33 homolog OS=Arabidopsis thaliana GN=VPS33 PE=2 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 6.230e-106
Identity = 182/253 (71.94%), Postives = 227/253 (89.72%), Query Frame = 3
Query:    3 MAQIPNLDNAPLNLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIELRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEV 761
            MAQIP+L+NAPLNLKSIR++S+R+LVN+LK++RG KCLVIDPKLSGS+SLI+PTS LKE G+ELR L+AEPVQT+C KVVY V  Q   M+FI+SH+ +D +K +QR+Y++YFVPRRSVACEKILE+EKVHNL+T+ E+PLYMVPLDEDV+SFEL+L+ K+  VDGD SS WHIAKAIH+LEF+FG+I  +RAKGKASVRVA+ILNRMQ EEPV+ +D+  PE++TL+L+DREVDMVTPMCSQLTYEGL+DE+
Sbjct:    1 MAQIPSLENAPLNLKSIRDKSERELVNLLKDVRGTKCLVIDPKLSGSVSLIIPTSKLKELGLELRHLTAEPVQTECTKVVYLVRSQLSFMKFIASHIQNDIAKAIQRDYYVYFVPRRSVACEKILEQEKVHNLVTVKEFPLYMVPLDEDVISFELELSEKDCLVDGDVSSLWHIAKAIHELEFSFGVISKMRAKGKASVRVADILNRMQVEEPVNSNDVGRPEVDTLILLDREVDMVTPMCSQLTYEGLIDEI 253          
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33A_RAT (Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus GN=Vps33a PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.051e-36
Identity = 89/251 (35.46%), Postives = 144/251 (57.37%), Query Frame = 3
Query:   18 NLDNAPLNLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE--LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKV-HNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEV 761
            +L    +NL  +RE  +R+L   L    G K +V D  L+G   LI   S LKE+ +E    L  +     D   +++ V P+   M  I+ +V  +  +G  R++ + FVPRRS+ CE+ L++  V  + +   EY L ++P D D+LS E + A KE  ++GD +S +H AK +  L+  +G IP +  KG+ + +VA ++ RM+ E   S + +  P  + L+L+DR VD++TP+ SQLTYEGL+DE+
Sbjct:    4 HLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEVEKMFTLKGSRLPAADVKNIIFLVRPRLELMDMIAENVLSEDRRGPTRDFHILFVPRRSLLCEQRLKDLGVLGSFIYREEYSLDLIPFDGDLLSMESESAFKECYLEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSV-FPVFDNLLLLDRNVDLLTPLASQLTYEGLIDEI 253          
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33A_MOUSE (Vacuolar protein sorting-associated protein 33A OS=Mus musculus GN=Vps33a PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.985e-36
Identity = 89/251 (35.46%), Postives = 144/251 (57.37%), Query Frame = 3
Query:   18 NLDNAPLNLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE--LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKV-HNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEV 761
            +L    +NL  +RE  +R+L   L    G K +V D  L+G   LI   S LKE+ +E    L  +     D   +++ V P+   M  I+ +V  +  +G  R++ + FVPRRS+ CE+ L++  V  + +   EY L ++P D D+LS E + A KE  ++GD +S +H AK +  L+  +G IP +  KG+ + +VA ++ RM+ E   S + +  P  + L+L+DR VD++TP+ SQLTYEGL+DE+
Sbjct:    4 HLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEVEKMFTLKGSRLPAADVKNIIFLVRPRLELMDIIAENVLSEDRRGPTRDFHILFVPRRSLLCEQRLKDVGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSV-FPVFDNLLLLDRNVDLLTPLASQLTYEGLIDEI 253          
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33A_HUMAN (Vacuolar protein sorting-associated protein 33A OS=Homo sapiens GN=VPS33A PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.204e-36
Identity = 89/251 (35.46%), Postives = 144/251 (57.37%), Query Frame = 3
Query:   18 NLDNAPLNLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE--LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKV-HNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEV 761
            +L    +NL  +RE  +R+L   L    G K +V D  L+G   LI   S LKE+ +E    L        D   +++FV P+   M  I+ +V  +  +G  R++ + FVPRRS+ CE+ L++  V  + +   EY L ++P D D+LS E + A KE  ++GD +S +H AK +  L+  +G IP +  KG+ + +VA ++ RM+ E   S + +  P  + L+L+DR VD++TP+ +QLTYEGL+DE+
Sbjct:    4 HLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEVEKMFTLKGNRLPAADVKNIIFFVRPRLELMDIIAENVLSEDRRGPTRDFHILFVPRRSLLCEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMIRMKREFTGSQNSI-FPVFDNLLLLDRNVDLLTPLATQLTYEGLIDEI 253          
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33B_BOVIN (Vacuolar protein sorting-associated protein 33B OS=Bos taurus GN=VPS33B PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.263e-31
Identity = 81/251 (32.27%), Postives = 140/251 (55.78%), Query Frame = 3
Query:   15 PNLDNAPL--NLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE-LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDE 758
            P+  +AP   +   ++  ++  L+ +L+ + GKK L I+  L   L  I   S LK++ ++ L  +  +P  +   ++ + V P+  +MR+I+S V+ D   G  R+Y + F P++  ACE +LEEE V+  ++  E+   ++PLD D+LS EL    +++ ++GD      +A+A+H L   +G  PN    G+ +    E+  R++ EE         PEI  + L+DR+VD VT +CSQ+ YEGLVD+
Sbjct:    4 PHRPDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDKLYKVENKPALSSSEQLCFLVRPRIKNMRYIASLVNADKMAGRTRKYKVIFSPQKFYACEMVLEEEGVYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTLAQALHLLSTLYGPFPNCYGIGRCAKMSYELWKRLEEEEDGETKGRR-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDD 253          
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33B_HUMAN (Vacuolar protein sorting-associated protein 33B OS=Homo sapiens GN=VPS33B PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.123e-30
Identity = 79/251 (31.47%), Postives = 139/251 (55.38%), Query Frame = 3
Query:   15 PNLDNAPL--NLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE-LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDE 758
            P+  +AP   +   ++  ++  L+ +L+ + GKK L I+  L   L  I   S LK++ ++ L  +  +P  +   ++ + V P+  +MR+I+S V+ D   G  R+Y + F P++  ACE +LEEE ++  ++  E+   ++PLD D+LS EL    +++ ++GD      +A+A+H L   +G  PN    G+ +    E+   ++ EE         PEI  + L+DR+VD VT +CSQ+ YEGLVD+
Sbjct:    4 PHRPDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDKLYKVENKPALSSNEQLCFLVRPRIKNMRYIASLVNADKLAGRTRKYKVIFSPQKFYACEMVLEEEGIYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTLYGPFPNCYGIGRCAKMAYELWRNLEEEEDGETKGRR-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDD 253          
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33A_DROME (Vacuolar protein sorting-associated protein 33A OS=Drosophila melanogaster GN=car PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.621e-29
Identity = 80/243 (32.92%), Postives = 133/243 (54.73%), Query Frame = 3
Query:   36 LNLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIELRLLSAE-PVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKV-HNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDE 758
            +NL+ ++E + R+L+  L  I G K +V+D  + G L L+       + GI L  L  E  +  + A VVY + P+   M  +++HV         R+Y + F PRRS  C   LE   V  +   I E     +PLD D++S E+  A ++  VDGD SS +  A  + +L+  +G IP +  KG+ + RV E   ++  +E  +L + +   ++ L+L+DR +D+++P+ +QLTYEGL+DE
Sbjct:   12 VNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDLVTRPKLFADRGIRLLALKPELHLPREVANVVYVMRPRVALMEQLAAHVKAGGRAAAGRQYHILFAPRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEMPNAFRDVSVDGDTSSLYQAAVGLVQLQRLYGRIPKIYGKGEFAHRVWEHAKQLGRDER-TLYNGDKGVVDQLILLDRSIDLLSPLATQLTYEGLIDE 253          
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33B_MOUSE (Vacuolar protein sorting-associated protein 33B OS=Mus musculus GN=Vps33b PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.118e-29
Identity = 84/254 (33.07%), Postives = 142/254 (55.91%), Query Frame = 3
Query:    3 MAQIPNLDNAPLNLKSIREQSQRD-LVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE-LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDE 758
            MA    LD   L   S+ ++  RD L+ +L+ + GKK L I+  L   L  I   S LK++ ++ L  +  +P  +   ++ + V P+  +MR+I+S V+ D   G  R+Y +   P++  ACE +LEEE V+  ++  E+   ++PLD D+LS EL    +++ ++GD      +A+A+H L   +G  PN    G+ +    ++  +++ EE  S +    PEI  + L+DR+VD VT +CSQ+ YEGLVD+
Sbjct:    1 MAFPHRLDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDKLYKVENKPALSANEQLCFLVRPRIKNMRYIASLVNADKLAGRIRKYKVILSPQKFYACEMVLEEEGVYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTLYGPFPNCYGIGRCAKMSYDLWRKLEEEED-SETKGRKPEIGHIFLLDRDVDFVTALCSQVVYEGLVDD 253          
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33B_RAT (Vacuolar protein sorting-associated protein 33B OS=Rattus norvegicus GN=Vps33b PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.341e-28
Identity = 84/255 (32.94%), Postives = 142/255 (55.69%), Query Frame = 3
Query:    3 MAQIPNLDNAPLNLKSIREQSQRD-LVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIELRLLSAEPVQTDCA--KVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDE 758
            MA    LD   L   S+ ++  RD L+ +L+ + GKK L I+  L   L  I   S LK++ ++ +L   E   T  +  ++ + V P+  +MR+I++ V+ D   G  R+Y +   P++  ACE +LEEE V+  ++  E+   ++PLD D+LS EL    +++ ++GD      +A+A+H L   +G  PN    G+ +    ++  +++ EE  S +    PEI  + L+DR+VD VT +CSQ+ YEGLVD+
Sbjct:    1 MAFPHRLDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVD-KLYKVENKLTLSSNEQLCFLVRPRIKTMRYIANLVNADKLAGRVRKYKIILSPQKFYACEMVLEEEGVYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTLYGPFPNCYGIGRCTKMSYDLWRKLEEEED-SETKGRRPEIGHIFLLDRDVDFVTALCSQVVYEGLVDD 253          
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VPS33_SCHPO (Vacuolar protein sorting-associated protein 33 OS=Schizosaccharomyces pombe GN=vps33 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25
Identity = 74/242 (30.58%), Postives = 126/242 (52.07%), Query Frame = 3
Query:   51 IREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIELRLLSAEPVQTDCAK-VVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTL----VLIDREVDMVTPMCSQLTYEGLVDEV 761
            ++E++   L++++ ++ GKK L+++  LSG L  IV T+TL+E+GI       E +  D  K  +Y   P + + + +++HV       L+ E  +  +P  ++  E +L+EE V   + + E+PL+ VPLD+D+LS EL     E       S       A+   E T G  P V  +G  + ++ E+L +   EE          EI+ L    +L+DR +D +TP  +QLTY G +DE+
Sbjct:    5 VKEKATFKLLDLIDSVTGKKSLLLERDLSGILGQIVTTNTLQEHGIPQVYWFNENIPNDIEKKTIYLCRPTYENAKLVATHVRQFQRDMLRIESTVIVLPTSNILFETVLQEEGVFGELLVTEWPLHAVPLDKDLLSLELGPEKLE------ESLLQRSTDALIDFERTHGRFPRVSGRGPYAAKMLELLEKTYQEEATINFGKVEGEISALYDSVLLVDRSLDRITPFLTQLTYFGFLDEI 240          
The following BLAST results are available for this feature:
BLAST of CX674329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
VPS33_ARATH6.230e-10671.94Vacuolar protein sorting-associated protein 33 hom... [more]
VP33A_RAT3.051e-3635.46Vacuolar protein sorting-associated protein 33A OS... [more]
VP33A_MOUSE3.985e-3635.46Vacuolar protein sorting-associated protein 33A OS... [more]
VP33A_HUMAN5.204e-3635.46Vacuolar protein sorting-associated protein 33A OS... [more]
VP33B_BOVIN2.263e-3132.27Vacuolar protein sorting-associated protein 33B OS... [more]
VP33B_HUMAN1.123e-3031.47Vacuolar protein sorting-associated protein 33B OS... [more]
VP33A_DROME1.621e-2932.92Vacuolar protein sorting-associated protein 33A OS... [more]
VP33B_MOUSE2.118e-2933.07Vacuolar protein sorting-associated protein 33B OS... [more]
VP33B_RAT2.341e-2832.94Vacuolar protein sorting-associated protein 33B OS... [more]
VPS33_SCHPO4.133e-2530.58Vacuolar protein sorting-associated protein 33 OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_5G08_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5G08-M15-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674329 ID=CX674329; Name=CX674329; organism=Citrus sinensis; type=EST; length=767bp
CAATGGCGCAAATTCCAAACTTGGATAACGCTCCTTTAAATCTTAAATCT
ATTAGAGAACAATCGCAGAGAGACCTCGTAAATATCCTAAAAAACATTCG
AGGAAAGAAGTGTTTGGTCATTGATCCGAAGCTCAGCGGTTCACTATCGT
TGATCGTCCCGACATCTACACTTAAGGAATATGGCATCGAATTGCGGCTT
CTTTCTGCTGAGCCAGTTCAGACTGATTGTGCCAAAGTGGTGTATTTTGT
TGGTCCACAGTTTATTTCGATGAGATTTATAAGTTCTCATGTTCACGATG
ATGCTTCTAAAGGACTTCAGAGAGAGTATTTTCTTTATTTTGTCCCTCGC
CGCTCTGTTGCTTGTGAGAAGATTCTTGAGGAGGAAAAAGTTCATAACTT
GATGACTATTGGGGAATACCCATTGTACATGGTTCCATTGGATGAGGATG
TTTTATCATTTGAACTTGATCTTGCTCATAAAGAATGGCAAGTTGATGGT
GATGCAAGTTCCCAATGGCACATTGCAAAAGCAATTCACAAGCTTGAGTT
TACTTTTGGATTAATACCAAATGTGAGAGCCAAGGGAAAAGCATCAGTAC
GTGTTGCAGAAATTCTGAACCGCATGCAGACAGAGGAACCAGTTTCCTTA
TCTGATATGAACATCCCAGAGATAAATACACTTGTCCTTATCGATAGAGA
GGTTGACATGGTTACTCCCATGTGTTCTCAATTAACATATGAAGGACTGG
TGGATGAGGTAAGCTGA
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