CX674329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VPS33_ARATH (Vacuolar protein sorting-associated protein 33 homolog OS=Arabidopsis thaliana GN=VPS33 PE=2 SV=1) HSP 1 Score: 383.645 bits (984), Expect = 6.230e-106 Identity = 182/253 (71.94%), Postives = 227/253 (89.72%), Query Frame = 3 Query: 3 MAQIPNLDNAPLNLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIELRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEV 761 MAQIP+L+NAPLNLKSIR++S+R+LVN+LK++RG KCLVIDPKLSGS+SLI+PTS LKE G+ELR L+AEPVQT+C KVVY V Q M+FI+SH+ +D +K +QR+Y++YFVPRRSVACEKILE+EKVHNL+T+ E+PLYMVPLDEDV+SFEL+L+ K+ VDGD SS WHIAKAIH+LEF+FG+I +RAKGKASVRVA+ILNRMQ EEPV+ +D+ PE++TL+L+DREVDMVTPMCSQLTYEGL+DE+ Sbjct: 1 MAQIPSLENAPLNLKSIRDKSERELVNLLKDVRGTKCLVIDPKLSGSVSLIIPTSKLKELGLELRHLTAEPVQTECTKVVYLVRSQLSFMKFIASHIQNDIAKAIQRDYYVYFVPRRSVACEKILEQEKVHNLVTVKEFPLYMVPLDEDVISFELELSEKDCLVDGDVSSLWHIAKAIHELEFSFGVISKMRAKGKASVRVADILNRMQVEEPVNSNDVGRPEVDTLILLDREVDMVTPMCSQLTYEGLIDEI 253
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33A_RAT (Vacuolar protein sorting-associated protein 33A OS=Rattus norvegicus GN=Vps33a PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.051e-36 Identity = 89/251 (35.46%), Postives = 144/251 (57.37%), Query Frame = 3 Query: 18 NLDNAPLNLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE--LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKV-HNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEV 761 +L +NL +RE +R+L L G K +V D L+G LI S LKE+ +E L + D +++ V P+ M I+ +V + +G R++ + FVPRRS+ CE+ L++ V + + EY L ++P D D+LS E + A KE ++GD +S +H AK + L+ +G IP + KG+ + +VA ++ RM+ E S + + P + L+L+DR VD++TP+ SQLTYEGL+DE+ Sbjct: 4 HLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEVEKMFTLKGSRLPAADVKNIIFLVRPRLELMDMIAENVLSEDRRGPTRDFHILFVPRRSLLCEQRLKDLGVLGSFIYREEYSLDLIPFDGDLLSMESESAFKECYLEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSV-FPVFDNLLLLDRNVDLLTPLASQLTYEGLIDEI 253
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33A_MOUSE (Vacuolar protein sorting-associated protein 33A OS=Mus musculus GN=Vps33a PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.985e-36 Identity = 89/251 (35.46%), Postives = 144/251 (57.37%), Query Frame = 3 Query: 18 NLDNAPLNLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE--LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKV-HNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEV 761 +L +NL +RE +R+L L G K +V D L+G LI S LKE+ +E L + D +++ V P+ M I+ +V + +G R++ + FVPRRS+ CE+ L++ V + + EY L ++P D D+LS E + A KE ++GD +S +H AK + L+ +G IP + KG+ + +VA ++ RM+ E S + + P + L+L+DR VD++TP+ SQLTYEGL+DE+ Sbjct: 4 HLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEVEKMFTLKGSRLPAADVKNIIFLVRPRLELMDIIAENVLSEDRRGPTRDFHILFVPRRSLLCEQRLKDVGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSV-FPVFDNLLLLDRNVDLLTPLASQLTYEGLIDEI 253
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33A_HUMAN (Vacuolar protein sorting-associated protein 33A OS=Homo sapiens GN=VPS33A PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.204e-36 Identity = 89/251 (35.46%), Postives = 144/251 (57.37%), Query Frame = 3 Query: 18 NLDNAPLNLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE--LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKV-HNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDEV 761 +L +NL +RE +R+L L G K +V D L+G LI S LKE+ +E L D +++FV P+ M I+ +V + +G R++ + FVPRRS+ CE+ L++ V + + EY L ++P D D+LS E + A KE ++GD +S +H AK + L+ +G IP + KG+ + +VA ++ RM+ E S + + P + L+L+DR VD++TP+ +QLTYEGL+DE+ Sbjct: 4 HLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEVEKMFTLKGNRLPAADVKNIIFFVRPRLELMDIIAENVLSEDRRGPTRDFHILFVPRRSLLCEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLMTLQALYGTIPQIFGKGECARQVANMMIRMKREFTGSQNSI-FPVFDNLLLLDRNVDLLTPLATQLTYEGLIDEI 253
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33B_BOVIN (Vacuolar protein sorting-associated protein 33B OS=Bos taurus GN=VPS33B PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.263e-31 Identity = 81/251 (32.27%), Postives = 140/251 (55.78%), Query Frame = 3 Query: 15 PNLDNAPL--NLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE-LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDE 758 P+ +AP + ++ ++ L+ +L+ + GKK L I+ L L I S LK++ ++ L + +P + ++ + V P+ +MR+I+S V+ D G R+Y + F P++ ACE +LEEE V+ ++ E+ ++PLD D+LS EL +++ ++GD +A+A+H L +G PN G+ + E+ R++ EE PEI + L+DR+VD VT +CSQ+ YEGLVD+ Sbjct: 4 PHRPDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDKLYKVENKPALSSSEQLCFLVRPRIKNMRYIASLVNADKMAGRTRKYKVIFSPQKFYACEMVLEEEGVYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTLAQALHLLSTLYGPFPNCYGIGRCAKMSYELWKRLEEEEDGETKGRR-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDD 253
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33B_HUMAN (Vacuolar protein sorting-associated protein 33B OS=Homo sapiens GN=VPS33B PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.123e-30 Identity = 79/251 (31.47%), Postives = 139/251 (55.38%), Query Frame = 3 Query: 15 PNLDNAPL--NLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE-LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDE 758 P+ +AP + ++ ++ L+ +L+ + GKK L I+ L L I S LK++ ++ L + +P + ++ + V P+ +MR+I+S V+ D G R+Y + F P++ ACE +LEEE ++ ++ E+ ++PLD D+LS EL +++ ++GD +A+A+H L +G PN G+ + E+ ++ EE PEI + L+DR+VD VT +CSQ+ YEGLVD+ Sbjct: 4 PHRPDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDKLYKVENKPALSSNEQLCFLVRPRIKNMRYIASLVNADKLAGRTRKYKVIFSPQKFYACEMVLEEEGIYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTLYGPFPNCYGIGRCAKMAYELWRNLEEEEDGETKGRR-PEIGHIFLLDRDVDFVTALCSQVVYEGLVDD 253
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33A_DROME (Vacuolar protein sorting-associated protein 33A OS=Drosophila melanogaster GN=car PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.621e-29 Identity = 80/243 (32.92%), Postives = 133/243 (54.73%), Query Frame = 3 Query: 36 LNLKSIREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIELRLLSAE-PVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKV-HNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDE 758 +NL+ ++E + R+L+ L I G K +V+D + G L L+ + GI L L E + + A VVY + P+ M +++HV R+Y + F PRRS C LE V + I E +PLD D++S E+ A ++ VDGD SS + A + +L+ +G IP + KG+ + RV E ++ +E +L + + ++ L+L+DR +D+++P+ +QLTYEGL+DE Sbjct: 12 VNLQLLQEAACRELLQQLDRIEGSKVIVLDETMIGPLDLVTRPKLFADRGIRLLALKPELHLPREVANVVYVMRPRVALMEQLAAHVKAGGRAAAGRQYHILFAPRRSCLCVSQLEVSGVLGSFGNIEELAWNYLPLDVDLVSMEMPNAFRDVSVDGDTSSLYQAAVGLVQLQRLYGRIPKIYGKGEFAHRVWEHAKQLGRDER-TLYNGDKGVVDQLILLDRSIDLLSPLATQLTYEGLIDE 253
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33B_MOUSE (Vacuolar protein sorting-associated protein 33B OS=Mus musculus GN=Vps33b PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.118e-29 Identity = 84/254 (33.07%), Postives = 142/254 (55.91%), Query Frame = 3 Query: 3 MAQIPNLDNAPLNLKSIREQSQRD-LVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIE-LRLLSAEPVQTDCAKVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDE 758 MA LD L S+ ++ RD L+ +L+ + GKK L I+ L L I S LK++ ++ L + +P + ++ + V P+ +MR+I+S V+ D G R+Y + P++ ACE +LEEE V+ ++ E+ ++PLD D+LS EL +++ ++GD +A+A+H L +G PN G+ + ++ +++ EE S + PEI + L+DR+VD VT +CSQ+ YEGLVD+ Sbjct: 1 MAFPHRLDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVDKLYKVENKPALSANEQLCFLVRPRIKNMRYIASLVNADKLAGRIRKYKVILSPQKFYACEMVLEEEGVYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTLYGPFPNCYGIGRCAKMSYDLWRKLEEEED-SETKGRKPEIGHIFLLDRDVDFVTALCSQVVYEGLVDD 253
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VP33B_RAT (Vacuolar protein sorting-associated protein 33B OS=Rattus norvegicus GN=Vps33b PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.341e-28 Identity = 84/255 (32.94%), Postives = 142/255 (55.69%), Query Frame = 3 Query: 3 MAQIPNLDNAPLNLKSIREQSQRD-LVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIELRLLSAEPVQTDCA--KVVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTLVLIDREVDMVTPMCSQLTYEGLVDE 758 MA LD L S+ ++ RD L+ +L+ + GKK L I+ L L I S LK++ ++ +L E T + ++ + V P+ +MR+I++ V+ D G R+Y + P++ ACE +LEEE V+ ++ E+ ++PLD D+LS EL +++ ++GD +A+A+H L +G PN G+ + ++ +++ EE S + PEI + L+DR+VD VT +CSQ+ YEGLVD+ Sbjct: 1 MAFPHRLDAPELPDFSMLKRLARDQLIYLLEQLPGKKDLFIEADLMSPLDRIANVSILKQHEVD-KLYKVENKLTLSSNEQLCFLVRPRIKTMRYIANLVNADKLAGRVRKYKIILSPQKFYACEMVLEEEGVYGDVSCDEWAFSLLPLDVDLLSMELPEFFRDYFLEGDQRWINTVAQALHLLSTLYGPFPNCYGIGRCTKMSYDLWRKLEEEED-SETKGRRPEIGHIFLLDRDVDFVTALCSQVVYEGLVDD 253
BLAST of CX674329 vs. ExPASy Swiss-Prot
Match: VPS33_SCHPO (Vacuolar protein sorting-associated protein 33 OS=Schizosaccharomyces pombe GN=vps33 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 4.133e-25 Identity = 74/242 (30.58%), Postives = 126/242 (52.07%), Query Frame = 3 Query: 51 IREQSQRDLVNILKNIRGKKCLVIDPKLSGSLSLIVPTSTLKEYGIELRLLSAEPVQTDCAK-VVYFVGPQFISMRFISSHVHDDASKGLQREYFLYFVPRRSVACEKILEEEKVHNLMTIGEYPLYMVPLDEDVLSFELDLAHKEWQVDGDASSQWHIAKAIHKLEFTFGLIPNVRAKGKASVRVAEILNRMQTEEPVSLSDMNIPEINTL----VLIDREVDMVTPMCSQLTYEGLVDEV 761 ++E++ L++++ ++ GKK L+++ LSG L IV T+TL+E+GI E + D K +Y P + + + +++HV L+ E + +P ++ E +L+EE V + + E+PL+ VPLD+D+LS EL E S A+ E T G P V +G + ++ E+L + EE EI+ L +L+DR +D +TP +QLTY G +DE+ Sbjct: 5 VKEKATFKLLDLIDSVTGKKSLLLERDLSGILGQIVTTNTLQEHGIPQVYWFNENIPNDIEKKTIYLCRPTYENAKLVATHVRQFQRDMLRIESTVIVLPTSNILFETVLQEEGVFGELLVTEWPLHAVPLDKDLLSLELGPEKLE------ESLLQRSTDALIDFERTHGRFPRVSGRGPYAAKMLELLEKTYQEEATINFGKVEGEISALYDSVLLVDRSLDRITPFLTQLTYFGFLDEI 240 The following BLAST results are available for this feature:
BLAST of CX674329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674329 ID=CX674329; Name=CX674329; organism=Citrus sinensis; type=EST; length=767bpback to top |