CX674326

Overview
NameCX674326
Unique NameCX674326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5395 contig Csv1_Contig5395:1..580. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CX674326 vs. ExPASy Swiss-Prot
Match: CDC25_ARATH (Dual specificity phosphatase Cdc25 OS=Arabidopsis thaliana GN=CDC25 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.257e-55
Identity = 100/131 (76.34%), Postives = 114/131 (87.02%), Query Frame = 2 
Query:   14 EEEKAMARSISYISGSQLLSLKRRPNIAVIDVRDDERSYDGHITGSLHYPSDSFTDKISDLIQEVRGKDTLVFHCALSQVRGPTCAKRLANYLDEVKEDTGINSIFVLERGFKGWEASGKPVCRCTDVPCK 406
            +++ AMARSISYI+ +QLL L RRPNIA+IDVRD+ER+YDGHI GSLHY S SF DKIS L+Q V+ KDTLVFHCALSQVRGPTCA+RL NYLDE KEDTGI +I +LERGF GWEASGKPVCRC +VPCK
Sbjct:   12 KKKMAMARSISYITSTQLLPLHRRPNIAIIDVRDEERNYDGHIAGSLHYASGSFDDKISHLVQNVKDKDTLVFHCALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAEVPCK 142
The following BLAST results are available for this feature:
BLAST of CX674326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CDC25_ARATH2.257e-5576.34Dual specificity phosphatase Cdc25 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_5G07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5G07-M13-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674326 ID=CX674326; Name=CX674326; organism=Citrus sinensis; type=EST; length=580bp
GAGATCGAAAAGTGAAGAAGAGAAAGCAATGGCTCGGTCCATCTCCTACA
TATCGGGCTCGCAGCTTCTCTCTCTGAAACGCCGTCCAAATATTGCCGTT
ATAGATGTCAGGGACGATGAAAGGAGTTACGATGGGCATATAACAGGATC
TCTGCACTACCCCAGTGACAGCTTCACTGATAAGATCTCTGATCTTATTC
AAGAGGTCAGGGGCAAAGATACCCTTGTTTTTCACTGCGCTTTAAGCCAG
GTTCGTGGCCCAACTTGCGCCAAGAGGCTTGCTAATTATCTCGACGAGGT
GAAAGAAGATACCGGGATAAATAGCATTTTTGTCCTGGAACGTGGCTTCA
AGGGCTGGGAAGCTTCTGGGAAACCTGTTTGTCGCTGCACTGATGTTCCA
TGTAAGGAGGAGAATCAACAATATTGATTTGATGCAAATCACAGTTGAGA
ATCACATATAATTATGTCCCAATAGTGTTATAGCACTGTTTGTTTAGTGA
ATTCATTCCTGACATTACATGATGCTACTTAAACAATATAATATGTAATG
CTAGTTTTTGATTTAGTTTCTACCAAAAAA
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