EY665498

Overview
NameEY665498
Unique NameEY665498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length839
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665498 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.308e-22
Identity = 43/81 (53.09%), Postives = 52/81 (64.20%), Query Frame = 1
Query:  565 LLELGLQVDIDESRSFIGGKRGSFIDKHGKPTEIGLHIFFGCYQ*SCSDW*KKARADKNXXXXXXXXXXXVNKGWGKIGEL 807
            LL+ G +VDI ESR+FIGGK GSF+DK G   E+GLH+FFGCY  +     KK  A+KN           VNKG G+IGEL
Sbjct:   98 LLDQGHEVDIYESRTFIGGKVGSFVDKRGNHIEMGLHVFFGCYN-NLFRLMKKVGAEKN-LLVKEHTHTFVNKG-GEIGEL 175          

HSP 2 Score: 56.6102 bits (135), Expect = 1.308e-22
Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 3
Query:  498 HAPKCLFPPKPEHYTGPRLKVAIIGAGLAG 587
            +APK LFPP+PEHY GP+LKVAIIGAGLAG
Sbjct:   62 NAPKGLFPPEPEHYRGPKLKVAIIGAGLAG 91          
BLAST of EY665498 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.880e-22
Identity = 42/81 (51.85%), Postives = 52/81 (64.20%), Query Frame = 1
Query:  565 LLELGLQVDIDESRSFIGGKRGSFIDKHGKPTEIGLHIFFGCYQ*SCSDW*KKARADKNXXXXXXXXXXXVNKGWGKIGEL 807
            LL+ G +VDI ESR+FIGGK GSF+D+ G   E+GLH+FFGCY  +     KK  A+KN           VNKG G+IGEL
Sbjct:   98 LLDQGHEVDIYESRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYN-NLFRLLKKVGAEKN-LLVKEHTHTFVNKG-GEIGEL 175          

HSP 2 Score: 56.6102 bits (135), Expect = 2.880e-22
Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 3
Query:  498 HAPKCLFPPKPEHYTGPRLKVAIIGAGLAG 587
            +APK LFPP+PEHY GP+LKVAIIGAGLAG
Sbjct:   62 NAPKGLFPPEPEHYRGPKLKVAIIGAGLAG 91          
BLAST of EY665498 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.881e-22
Identity = 43/89 (48.31%), Postives = 54/89 (60.67%), Query Frame = 1
Query:  565 LLELGLQVDIDESRSFIGGKRGSFIDKHGKPTEIGLHIFFGCYQ*SCSDW*KKARADKNXXXXXXXXXXXVNKGWGKIGELLIKTKNGS 831
            LL+ G +VDI ESR FIGGK GSF+DK G   E+GLH+FFGCY  +     KK  AD+N           VN+G G+IGEL  +   G+
Sbjct:   83 LLDQGHEVDIYESRQFIGGKVGSFVDKRGNHIEMGLHVFFGCYN-NLFRLMKKVGADEN-LLVKDHTHTFVNRG-GEIGELDFRLPMGA 168          

HSP 2 Score: 56.6102 bits (135), Expect = 2.881e-22
Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 3
Query:  498 HAPKCLFPPKPEHYTGPRLKVAIIGAGLAG 587
            +APK LFPP+PEHY GP+LKVAIIGAGLAG
Sbjct:   47 NAPKGLFPPEPEHYRGPKLKVAIIGAGLAG 76          
BLAST of EY665498 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.875e-22
Identity = 41/81 (50.62%), Postives = 52/81 (64.20%), Query Frame = 1
Query:  565 LLELGLQVDIDESRSFIGGKRGSFIDKHGKPTEIGLHIFFGCYQ*SCSDW*KKARADKNXXXXXXXXXXXVNKGWGKIGEL 807
            LL+ G +VDI ESR+FIGGK GSF+DK G   E+GLH+FFGCY  +     KK  A+KN           VN+G G++GEL
Sbjct:  101 LLDQGHEVDIYESRTFIGGKVGSFVDKQGNHIEMGLHVFFGCYN-NLFRLLKKVGAEKN-LLVKDHTHTFVNRG-GELGEL 178          

HSP 2 Score: 56.6102 bits (135), Expect = 4.875e-22
Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 3
Query:  498 HAPKCLFPPKPEHYTGPRLKVAIIGAGLAG 587
            +APK LFPP+PEHY GP+LKVAIIGAGLAG
Sbjct:   65 NAPKGLFPPEPEHYRGPKLKVAIIGAGLAG 94          
BLAST of EY665498 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.278e-20
Identity = 41/81 (50.62%), Postives = 49/81 (60.49%), Query Frame = 1
Query:  565 LLELGLQVDIDESRSFIGGKRGSFIDKHGKPTEIGLHIFFGCYQ*SCSDW*KKARADKNXXXXXXXXXXXVNKGWGKIGEL 807
            LL+ G +VD+ ESR FIGGK GSF+D+ G   E+GLH+FFGCY  +     KK  AD N           VNKG G IGEL
Sbjct:   83 LLDQGHEVDLYESRPFIGGKVGSFVDRQGNHIEMGLHVFFGCYS-NLFRLMKKVGADNN-LLVKEHTHTFVNKG-GTIGEL 160          

HSP 2 Score: 52.373 bits (124), Expect = 3.278e-20
Identity = 26/45 (57.78%), Postives = 30/45 (66.67%), Query Frame = 3
Query:  453 STTA*ESLIMEIKERHAPKCLFPPKPEHYTGPRLKVAIIGAGLAG 587
            S  A  S +     R   + LFPP+PEHY GP+LKVAIIGAGLAG
Sbjct:   32 SAVAARSTVTSPTWRQRSQRLFPPEPEHYRGPKLKVAIIGAGLAG 76          
BLAST of EY665498 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3)

HSP 1 Score: 65.0846 bits (157), Expect = 7.675e-19
Identity = 39/81 (48.15%), Postives = 50/81 (61.73%), Query Frame = 1
Query:  565 LLELGLQVDIDESRSFIGGKRGSFIDKHGKPTEIGLHIFFGCYQ*SCSDW*KKARADKNXXXXXXXXXXXVNKGWGKIGEL 807
            LL+ G +VDI +SR+FIGGK GSF+D+ G   E+GLH+FFGCY  +     KK  A+KN           +NK  G IGEL
Sbjct:   75 LLDQGHEVDIYDSRTFIGGKVGSFVDRRGNHIEMGLHVFFGCYN-NLFRLMKKVGAEKN-LLVKDHTHTFINKD-GTIGEL 152          

HSP 2 Score: 50.0618 bits (118), Expect = 7.675e-19
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 3
Query:  498 HAPKCLFPPKPEHYTGPRLKVAIIGAGLAG 587
            +APK LFPP+P  Y GP+LKVAIIGAGLAG
Sbjct:   39 NAPKGLFPPEPVPYKGPKLKVAIIGAGLAG 68          
The following BLAST results are available for this feature:
BLAST of EY665498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ZDS_CAPAN1.308e-2253.09Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_SOLLC2.880e-2251.85Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_NARPS2.881e-2248.31Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_TARER4.875e-2250.62Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_MAIZE3.278e-2050.62Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
ZDS_ARATH7.675e-1948.15Zeta-carotene desaturase, chloroplastic/chromoplas... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-102-002-H07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665498 ID=EY665498; Name=EY665498; organism=Citrus sinensis; type=EST; length=839bp
CCACGCGTCCGCCCACGCGTCCGGCAGCCCCTATTGAGCCTAAACCATTT
CATCCTCTCCAATGACGCAATTTCTGGCAATTTAGGGGTGTTTCCCTTCC
TATCGAGGACCAAAAAAGCTTTTGCAGGAAGGTTGGCCAGAGATTTTTTG
TAAAAAAACTTGTCTAGTCGATCTCTATAAACAAAAAGGCATGGGCTTTC
ACTTTAGTTTCAATTTGCATATGCTGTAGACCATAAGCACCTTTCTATCA
ACTCAAGGTAGGAAATGGCAGCAGCCCATTTCACTTTAGTTTCAATTTGC
AACCCATTATTTTAATTTAAATTAAGTTAAATAAATTACTTAATGAAACG
GTGAGAGACCCACGGCTGCCTGAGAAAGTTTGAGAATAGAGACGACAGAG
AAGAGAGATAGCAGACCCACGGTGAGAGACCCATAACCAGAGATAAACGC
CGAGCACCACTGCTTGAGAAAGTTTGATAATGGAGATCAAAGAGAGACAC
GCTCCCAAGTGTTTGTTTCCACCAAAACCGGAACATTATACAGGACCAAG
GCTGAAAGTGGCTATTATTGGAGCTGGGCTTGCAGGTGGATATAGATGAA
TCAAGGTCCTTCATTGGTGGTAAAAGGGGTTCATTTATCGATAAACATGG
AAAACCTACTGAAATCGGCCTGCACATTTTCTTTGGATGCTACCAATAAT
CTTGTTCCGATTGGTGAAAAAAGGCCAGGGCGGACAAAAATTTACTCCTG
AAAGGATCCTACCTCGTACTTTTGGTGAATAAAGGGTGGGGGAAAATTGG
TGAATTATTGATAAAAACAAAAAATGGTTCCGGCTCCTT
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