CX674315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX674315 vs. ExPASy Swiss-Prot
Match: GLGB_ORYSJ (1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica GN=SBE1 PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 6.613e-54 Identity = 97/122 (79.51%), Postives = 110/122 (90.16%), Query Frame = 3 Query: 6 LDDKFPFLASTKQIVSSTNEEDKVIVFERGDLVFVFNFHPENTYEGYKVGCDLPGKYRVALDSDAWGFGGDGRVGHNIDHFTSPEGIPGVAETNFNNRPNSFRVLSPPRTSVVYYRVEESQE 371 L+++F FL+S+KQIVS NE+DKVIVFERGDLVFVFNFHP TY+GYKVGCDLPGKYRVALDSDA FGG GRVGH++DHFTSPEG+PGV ETNFNNRPNSF+VLSPPRT V YYRV+E +E Sbjct: 642 LEEEFSFLSSSKQIVSDMNEKDKVIVFERGDLVFVFNFHPNKTYKGYKVGCDLPGKYRVALDSDALVFGGHGRVGHDVDHFTSPEGMPGVPETNFNNRPNSFKVLSPPRTCVAYYRVDEDRE 763
BLAST of CX674315 vs. ExPASy Swiss-Prot
Match: GLGB_SOLTU (1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum GN=SBE1 PE=2 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 2.785e-44 Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 3 Query: 6 LDDKFPFLASTKQIVSSTNEEDKVIVFERGDLVFVFNFHPENTYEGYKVGCDLPGKYRVALDSDAWGFGGDGRVGHNIDHFTSPEGIPGVAETNFNNR 299 LD+KF FLAS KQIVSS ++++KV+VFERGDLVFVFNFHP+NTYEGYKVGCDLPGKYRVALDSDAW FGG GR GH++DHFTSPEGIPGV ETNFN R Sbjct: 662 LDEKFSFLASGKQIVSSMDDDNKVVVFERGDLVFVFNFHPKNTYEGYKVGCDLPGKYRVALDSDAWEFGGHGRTGHDVDHFTSPEGIPGVPETNFNGR 759
BLAST of CX674315 vs. ExPASy Swiss-Prot
Match: GLGB_MAIZE (1,4-alpha-glucan-branching enzyme 2, chloroplastic/amyloplastic OS=Zea mays GN=SBE1 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.093e-27 Identity = 62/118 (52.54%), Postives = 78/118 (66.10%), Query Frame = 3 Query: 6 LDDKFPFLASTKQIVSSTNEEDKVIVFERGDLVFVFNFHPENTYEGYKVGCDLPGKYRVALDSDAWGFGGDGRVGHNIDHFTSPEGIPGVAETNFNNRPNSFRVLSPPRTSVVYYRVE 359 L+ K+ F+ S Q +S +EEDKVIVFE+GDLVFVFNFH N+Y Y++GC PG Y+V LDSDA FGG R+ H +HFT A+ + +NRP SF V +P RT VVY VE Sbjct: 690 LEQKYEFMTSDHQYISRKHEEDKVIVFEKGDLVFVFNFHCNNSYFDYRIGCRKPGVYKVVLDSDAGLFGGFSRIHHAAEHFT--------ADCSHDNRPYSFSVYTPSRTCVVYAPVE 799
BLAST of CX674315 vs. ExPASy Swiss-Prot
Match: GLGB_DEBHA (1,4-alpha-glucan-branching enzyme OS=Debaryomyces hansenii GN=GLC3 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 4.783e-20 Identity = 51/120 (42.50%), Postives = 71/120 (59.17%), Query Frame = 3 Query: 6 LDDKFPFLASTKQIVSSTNEEDKVIVFERGDLVFVFNFHPENTYEGYKVGCDLPGKYRVALDSDAWGFGGDGRV-------GHNIDHFTSPEGIPGVAETNFNNRPNSFRVLSPPRTSVV 344 LD K+ L S++ VS NE DKVIVFER L+F+FNFHP N+Y YK+G + PG Y++ L+SD+ FGG GR+ G + FT+ E +N+R N+ P RT++V Sbjct: 592 LDTKYGILLSSQAYVSLKNENDKVIVFERNGLLFIFNFHPTNSYADYKIGVETPGVYQIVLNSDSLSFGGHGRIEETNKETGEKLQFFTNNE--------RWNDRSNALFCYIPSRTAIV 703
BLAST of CX674315 vs. ExPASy Swiss-Prot
Match: GLGB_HORSE (1,4-alpha-glucan-branching enzyme OS=Equus caballus GN=GBE1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.159e-20 Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 3 Query: 3 ELDDKFPFLASTKQIVSSTNEEDKVIVFERGDLVFVFNFHPENTYEGYKVGCDLPGKYRVALDSDAWGFGGDGRVGHNIDHFTSPEGIPGVAETNFNNRPNSFRVLSPPRTSVVYYRVE 359 +L+++ +L++ + VS +E +KVI FER L+F+FNFHP +Y Y+VG LPGK+++ LDSDA +GG R+ HN D F+ P N RP+S V P R +++ V+ Sbjct: 586 KLEERCGWLSAPQAFVSEKHEGNKVIAFERAALLFIFNFHPSKSYTNYRVGTTLPGKFKIVLDSDAAEYGGHQRLDHNTDFFSEP--------YEHNERPSSLLVYIPSRVALILQNVD 696
BLAST of CX674315 vs. ExPASy Swiss-Prot
Match: GLGB_HUMAN (1,4-alpha-glucan-branching enzyme OS=Homo sapiens GN=GBE1 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.010e-18 Identity = 45/118 (38.14%), Postives = 70/118 (59.32%), Query Frame = 3 Query: 6 LDDKFPFLASTKQIVSSTNEEDKVIVFERGDLVFVFNFHPENTYEGYKVGCDLPGKYRVALDSDAWGFGGDGRVGHNIDHFTSPEGIPGVAETNFNNRPNSFRVLSPPRTSVVYYRVE 359 L++++ +LA+ + VS +E +K+I FER L+F+FNFHP +Y Y+VG LPGK+++ LDSDA +GG R+ H+ D F+ N RP S V P R +++ V+ Sbjct: 590 LEERYGWLAAPQAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGHQRLDHSTDFFSE--------AFEHNGRPYSLLVYIPSRVALILQNVD 699
BLAST of CX674315 vs. ExPASy Swiss-Prot
Match: GLGB_FELCA (1,4-alpha-glucan-branching enzyme OS=Felis catus GN=GBE1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.625e-18 Identity = 45/119 (37.82%), Postives = 70/119 (58.82%), Query Frame = 3 Query: 3 ELDDKFPFLASTKQIVSSTNEEDKVIVFERGDLVFVFNFHPENTYEGYKVGCDLPGKYRVALDSDAWGFGGDGRVGHNIDHFTSPEGIPGVAETNFNNRPNSFRVLSPPRTSVVYYRVE 359 +L+++ +L++ + VS +E +K+I FER LVF+FNFHP +Y Y+VG LPGK+R+ LD+DA +GG R+ H+ + F+ P N RP S V P R ++ V+ Sbjct: 586 KLEERCGWLSAPQAFVSEKHEGNKIIAFERAGLVFIFNFHPSKSYTDYRVGTTLPGKFRIVLDTDAAEYGGHQRLDHSTEFFSQP--------FKHNERPCSLLVYIPNRVGLILQNVD 696
BLAST of CX674315 vs. ExPASy Swiss-Prot
Match: GLGB_YARLI (1,4-alpha-glucan-branching enzyme OS=Yarrowia lipolytica GN=GLC3 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18 Identity = 46/118 (38.98%), Postives = 68/118 (57.63%), Query Frame = 3 Query: 12 DKFPFLASTKQIVSSTNEEDKVIVFERGDLVFVFNFHPENTYEGYKVGCDLPGKYRVALDSDAWGFGGDGRVGHNIDH-FTSPEGIPGVAETNFNNRPNSFRVLSPPRTSVVYYRVEE 362 D + +L++ + VS NE+DKV+V+ER LVFVFNFHP ++ Y++G D PG Y + LDSD+ FGG GR+ H T P +N R N + P R ++V+ R ++ Sbjct: 578 DHYGWLSADQAYVSLKNEDDKVVVYERAGLVFVFNFHPNKSFTDYRIGVDQPGTYTLVLDSDSPEFGGFGRIDHEKTRCHTEP--------LEWNGRANCMHIYIPSRVALVFAREDD 687
BLAST of CX674315 vs. ExPASy Swiss-Prot
Match: GLGB_CRYNE (1,4-alpha-glucan-branching enzyme OS=Cryptococcus neoformans GN=GLC3 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.974e-18 Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 3 Query: 6 LDDKFPFLASTKQIVSSTNEEDKVIVFERGDLVFVFNFHPENTYEGYKVGCDLPGKYRVALDSDAWGFGGDGRVGHNIDHFTSPEGIPGVAETNFNNRPNSFRVLSPPRTSVV 344 L+DK+ +L S + VS +E DK+IVFER L+F+FNFHP ++ Y+VG D G+Y+V L SD FGG R+ +FT+P +N R N +V SP RT +V Sbjct: 575 LEDKYKWLNSPQAYVSLKHEGDKMIVFERAGLLFIFNFHPTQSFTDYRVGVDTAGEYKVILTSDETRFGGHNRIDMGGRYFTTP--------MEWNGRKNWLQVYSPSRTVLV 679
BLAST of CX674315 vs. ExPASy Swiss-Prot
Match: GLGB_MOUSE (1,4-alpha-glucan-branching enzyme OS=Mus musculus GN=Gbe1 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.465e-17 Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 3 Query: 6 LDDKFPFLASTKQIVSSTNEEDKVIVFERGDLVFVFNFHPENTYEGYKVGCDLPGKYRVALDSDAWGFGGDGRVGHNIDHFTSPEGIPGVAETNFNNRPNSFRVLSPPRTSVVYYRVE 359 L+++ +L++ + VS +E +K I FER L+F+FNFHP +Y Y+VG PGK+++ LDSDA +GG R+ HN ++F N RP S V P R +++ V+ Sbjct: 590 LEERCGWLSAPQAYVSEKHEANKTITFERAGLLFIFNFHPSKSYTDYRVGTATPGKFKIVLDSDAAEYGGHQRLDHNTNYFAE--------AFEHNGRPYSLLVYIPSRVALILQNVD 699 The following BLAST results are available for this feature:
BLAST of CX674315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674315 ID=CX674315; Name=CX674315; organism=Citrus sinensis; type=EST; length=731bpback to top |