CX674298

Overview
NameCX674298
Unique NameCX674298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX674298 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.450e-70
Identity = 118/150 (78.67%), Postives = 138/150 (92.00%), Query Frame = -1 
Query:  398 LDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEATGFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQ 847
            ++KRFKTLP  E+LPRNE +GGYIFVCNNDTMQE+LKRQLFGLPPRYRDSVRAITPGLPLFLYNY+THQLHG+FEA  FGG+NIDPTAWEDKK +GESRFPAQVR+  RK+C+ LEED+FRP+LHHYDGPKFRLEL++PE + L+D+ E+
Sbjct:   55 VEKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEE 204
The following BLAST results are available for this feature:
BLAST of CX674298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
B2_DAUCA2.450e-7078.67B2 protein OS=Daucus carota PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS10_5F02_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-5F02-K3-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674298 ID=CX674298; Name=CX674298; organism=Citrus sinensis; type=EST; length=901bp
TTAGGGTACCGCGGCCCCCCCCAAATTATCCAAACATCATAAAACACAAG
ACAATCATCAGAAACTCAGATTACATACACAGGACAGAGATATTAAAGCC
TTCATGTTTAAAGGCGCTCACATTCTTTCTCTTTCACATCTTGCAAGTCT
GTCTTTAAGACTGCATTACTATCAAATGTAATACATACTGCAAATGCTCA
AGAAGTAGCTTCATGAGACGAAAATATTTTATTTAGTTGACTCACACAAC
ATTTCCTACTTTTCACAGGAAGATTCATACAACCAGACTTTTACCATAGC
TTGCGCTCTTGAGGAAAATCGGTGAAAAGCAGGCAGCTCACATCCTACCA
CATTTGCCAATTCTGCTAAAATATTATGCTTATGCAGCAGAGCCCGCTTG
TTCACAAAGATCCATTAGATCAAGAGTCTCAGGAACAGAGAGCTCAAGAC
GAAATTTAGGACCATCGTAGTGATGCAAGACAGGCCTAAAAGCATCTTCT
TCCAATGCCTTGCACAGTTTTCTTACCCGGATCCTTACCTGAGCAGGAAA
CCTTGATTCCCCTTTACACTTTTTGTCCTCCCAGGCTGTTGGGTCAATGT
TGGAGCCTCCAAAACCAGTTGCCTCAAATATTCCATGCAGTTGGTGAGTA
GTATAGTTGTAGAGAAAAAGAGGTAAGCCTGGTGTTATAGCACGGACGGA
ATCCCTATATCTTGGAGGTAAACCAAAAAGCTGGCGTTTTAAATCTTCCT
GCATTGTGTCGTTGTTGCAGACAAAGATGTACCCTCCTAGCACCTCATTT
CTCGGAAGTGTCTCTGTTGCAGGCAAAGTCTTGAACCTTTTGTCAAGTGC
ACTGTTTGCGTTGCTATCATTGTTGTTGTTGTTGTTATTGTTGTTGTTTT
C
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