EY717716

Overview
NameEY717716
Unique NameEY717716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY717716 vs. ExPASy Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 1.053e-28
Identity = 62/148 (41.89%), Postives = 94/148 (63.51%), Query Frame = 2 
Query:   95 MLAVFDKSVAKAPEALQSPQT--ESACALKNGLLANHFSSVHPGSVTVNLGSSGVIAYSLNRQNPLLPRLFAVVDDIFCLFQGHIENVALLKQQYGLNKTANEVIIVIEAYRTLRDRGPYPADQVVRDIQGKFAFILYDSSSKNAFLA 532
            MLAVF++S+ + P  L  PQ   +   A     +A  F +    S   +L +   +A+S   +NPL PR   V+DD+FC+F G ++N   L++ YGL++ A E +I++EAY+ LRDR PYP DQV+++++GKFAFIL+DS +   FLA
Sbjct:    1 MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREEIAESFKTWKQDSTFYHLFNGNFMAFSHGNENPLQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRAPYPPDQVIKELEGKFAFILFDSKASTLFLA 148
The following BLAST results are available for this feature:
BLAST of EY717716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TSJT1_TOBAC1.053e-2841.89Stem-specific protein TSJT1 OS=Nicotiana tabacum G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-082-F08-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY717716 ID=EY717716; Name=EY717716; organism=Citrus sinensis; type=EST; length=909bp
CCACGCGTCCGATTTTTCCATCGAGCGCACGCATCAAAACTTTTTGTCTT
TCTTTTTATCGTGGCCAGTGAAGAACGATCGTGAGGGAGAGAAAATGCTG
GCAGTGTTTGACAAATCGGTGGCCAAAGCCCCAGAGGCTCTGCAGAGTCC
ACAGACCGAGTCTGCTTGCGCGCTGAAGAATGGTCTATTGGCTAACCACT
TTAGCTCTGTTCACCCTGGCTCTGTCACTGTGAATCTTGGCTCTTCTGGC
GTCATTGCTTACTCCCTTAACAGGCAAAATCCTCTTTTGCCAAGATTATT
TGCGGTTGTGGATGACATTTTCTGCTTGTTCCAAGGCCACATTGAGAACG
TTGCTCTGCTGAAGCAGCAATATGGACTAAACAAAACAGCAAATGAGGTC
ATCATTGTCATTGAGGCTTACAGAACTCTCAGGGATCGAGGTCCTTATCC
TGCCGATCAGGTTGTCAGAGACATTCAAGGGAAGTTTGCATTTATTCTCT
ATGACAGCTCTTCGAAAAACGCATTCTTAGCTTCTGATGCTGATGGGAGT
GTTCCCTTCTTCTGGGGTACTGATTCTGAAGGCCATCTTGTTCTTTCCGA
TGATGTAGAGATTGTGAAAAAGGCTTGTGGGAAGTCTTTTGCACCATTCC
CTAAAGCATGCTACTCTACATCCTCCTGGGGGAGTGAGGAGGCTCCAAGC
CCCCCATGAAAGATCTGAAGCCTGGGCCCACGGTAAAATAATCCAGGTCA
GGTTTGCCCTCCACCTTTCACGGAGGAGCCTCACAACAACAAGAACACCG
CCCTCGCCCCGAGTTCCCAAAACCGACAAATGATTCCCAGACCGTGTGGG
GGCGTGTTAAAGATTTCCGGAAAGAGTAGTGATAAGATTGGGCTGTGCGG
GGGCGAGTT
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