EY665434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY665434 vs. ExPASy Swiss-Prot
Match: C3H53_ORYSJ (Zinc finger CCCH domain-containing protein 53 OS=Oryza sativa subsp. japonica GN=Os07g0682400 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 8.502e-57 Identity = 117/167 (70.06%), Postives = 126/167 (75.45%), Query Frame = 1 Query: 10 QNDTQRXXXXXXLMLNED-MHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVEKGKFSPWGNPNWA*FKRPF*TFNMGAEM 504 QN++QR LML D HKF GR RLER DF A ++NP SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPYKEKGKVPDKYRKQ Q E+ FS P + PF +GA M Sbjct: 319 QNESQRAAAAAALMLGGDEAHKFMGRPRLERADF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQHQPGERVDFSSCTTPTGLDARDPFDMHQLGARM 480
BLAST of EY665434 vs. ExPASy Swiss-Prot
Match: C3H22_ORYSJ (Zinc finger CCCH domain-containing protein 22 OS=Oryza sativa subsp. japonica GN=Os03g0328900 PE=2 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 3.950e-54 Identity = 114/167 (68.26%), Postives = 124/167 (74.25%), Query Frame = 1 Query: 13 NDTQRXXXXXXLML--NEDMHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVEKGKFSPWGNPNWA*FKRPF*TFNMGAEM 504 ND QR LML +++ HKF GR RL+R DF A ++NP SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPYKEKGKVPDKYRK Q G FS P + PF +GA M Sbjct: 324 NDNQRAAAAAALMLGGSDEAHKFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKHQ-----GDFSGCTTPTGLDGRDPFDLHQLGARM 480
BLAST of EY665434 vs. ExPASy Swiss-Prot
Match: C3H23_ORYSJ (Zinc finger CCCH domain-containing protein 23 OS=Oryza sativa subsp. japonica GN=Os03g0329200 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.271e-52 Identity = 113/166 (68.07%), Postives = 123/166 (74.10%), Query Frame = 1 Query: 13 NDTQRXXXXXXLMLNED-MHKF-GRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVEKGKFSPWGNPNWA*FKRPF*TFNMGAEM 504 ND QR ++ D HKF GR RL+R DF A ++NP SRQIYLTFPADSTFREEDVSNYFSIYGPV DVRIPYQQKRMFGFVTFVYPETVK+ILAKGNPHF+CDARVLVKPYKEKGKVPDKYRKQQQ G F +P + PF +GA M Sbjct: 318 NDNQRAAAAALMLAGGDEAHKFMGRPRLDRVDF-----ASMMNPGSRQIYLTFPADSTFREEDVSNYFSIYGPVHDVRIPYQQKRMFGFVTFVYPETVKLILAKGNPHFICDARVLVKPYKEKGKVPDKYRKQQQ----GDFCCM-SPTGLDARDPFDFHQLGARM 473
BLAST of EY665434 vs. ExPASy Swiss-Prot
Match: C3H46_ARATH (Zinc finger CCCH domain-containing protein 46 OS=Arabidopsis thaliana GN=At3g51950 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 1.454e-48 Identity = 102/145 (70.34%), Postives = 111/145 (76.55%), Query Frame = 1 Query: 10 QNDTQRXXXXXXLMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQQQQVEKGKFSPWG 444 QND QR LM+ +++ K GR R ER D S + PASRQIYLTFPADS FREEDVSNYFS +GPVQDVRIPYQQKRMFGFVTFVYPETVK ILAKGNPHFVCD+RVLVKPYKEKGKVPDKYR Q + + SP G Sbjct: 220 QNDVQRAAAA--LMIGDELQKLGRWRPERIDLS-----AMACPASRQIYLTFPADSRFREEDVSNYFSTFGPVQDVRIPYQQKRMFGFVTFVYPETVKSILAKGNPHFVCDSRVLVKPYKEKGKVPDKYR--TNQTTERELSPTG 355
BLAST of EY665434 vs. ExPASy Swiss-Prot
Match: C3H55_ARATH (Zinc finger CCCH domain-containing protein 55 OS=Arabidopsis thaliana GN=At5g12440 PE=2 SV=2) HSP 1 Score: 177.178 bits (448), Expect = 1.408e-43 Identity = 93/158 (58.86%), Postives = 121/158 (76.58%), Query Frame = 1 Query: 85 RLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDKYRKQ--QQQVEKGKFSPWGNPNWA*FKRPF*TFNMGAEMFL**YSRTCR*RRKME 552 RLER + +++ N ASRQIYLTFPADSTF++EDV+ YFS++G VQDVRIPYQQKRMFGFV+F +PETVK++LA+GNPHF+CD+RVLVKPYKEKGKV DK ++Q QQQ+E+G +SP +P+ R F++G++M Y R RRK+E Sbjct: 240 RLERMELAMH-LGDQSNSASRQIYLTFPADSTFKDEDVATYFSLFGTVQDVRIPYQQKRMFGFVSFAHPETVKVVLARGNPHFICDSRVLVKPYKEKGKVLDKKQQQLLQQQIERGNYSPCSSPSGI-DPREQSDFHLGSKML---YERREMMRRKIE 392
BLAST of EY665434 vs. ExPASy Swiss-Prot
Match: C3H18_ARATH (Zinc finger CCCH domain-containing protein 18 OS=Arabidopsis thaliana GN=At2g05160 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.785e-30 Identity = 69/112 (61.61%), Postives = 82/112 (73.21%), Query Frame = 1 Query: 46 LMLNEDMHKFGRSRLERNDFSINGSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGK 381 ++L ED KF ERN+ G + SRQIYLTFPA+S+F E DVS YF+ YG V+DVRIP QQKRM+GFVTF ETVK ILAKGNPHF+C+ARVLVKPY+EK + Sbjct: 290 VILAEDASKFVEYTGERNEH------GAILAGSRQIYLTFPAESSFTEHDVSIYFTSYGHVEDVRIPCQQKRMYGFVTFASSETVKHILAKGNPHFICNARVLVKPYREKSR 395
BLAST of EY665434 vs. ExPASy Swiss-Prot
Match: C3H54_ORYSJ (Zinc finger CCCH domain-containing protein 54 OS=Oryza sativa subsp. japonica GN=Os08g0126700 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 2.578e-29 Identity = 60/93 (64.52%), Postives = 73/93 (78.49%), Query Frame = 1 Query: 115 GSAGIVNPASRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKVPDK 393 G G V +S QIYLTFPA+STF E+DV+NYF YGPV+DVRIP Q++RMFGFV+F PETV IL + NPHF+C +RVLVKPY+EK K D+ Sbjct: 412 GDTGSVPASSHQIYLTFPAESTFAEDDVANYFGQYGPVRDVRIPCQERRMFGFVSFQSPETVSTILMRRNPHFICGSRVLVKPYREKSKCVDR 504
BLAST of EY665434 vs. ExPASy Swiss-Prot
Match: C3H51_ORYSJ (Putative zinc finger CCCH domain-containing protein 51 OS=Oryza sativa subsp. japonica GN=Os07g0583300 PE=4 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 4.259e-24 Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 1 Query: 142 SRQIYLTFPADSTFREEDVSNYFSIYGPVQDVRIPYQQKRMFGFVTFVYPETVKIILAKGNPHFVCDARVLVKPYKEKGKV 384 S QIY+TFP S F ++DV NYF +GPV VRIPYQ+KRMFGFV+F+Y ETV++IL+KG HF+C RVLVK Y EK ++ Sbjct: 324 SNQIYMTFPVHSKFTDDDVENYFKQFGPVSGVRIPYQEKRMFGFVSFLYTETVRLILSKGTAHFICGLRVLVKRYMEKSEL 404 The following BLAST results are available for this feature:
BLAST of EY665434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY665434 ID=EY665434; Name=EY665434; organism=Citrus sinensis; type=EST; length=1039bpback to top |