CV885691
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885691 vs. ExPASy Swiss-Prot
Match: IMB1_MOUSE (Importin subunit beta-1 OS=Mus musculus GN=Kpnb1 PE=1 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 6.089e-46 Identity = 105/231 (45.45%), Postives = 141/231 (61.04%), Query Frame = 2 Query: 14 IMGRLGQTLELQ--IVSSDDREKQGDLQASLCGVLQVIIQKFSSTDATKSFILQTADQIMVLFLRVF--ACRSSTVHEEAMLAIGALAYATGPEFAKYMPEFYQYLQMGLQNSEEYQVCAITVGVVGDVCRALDDKVLPFCDGIMXXXXXXXXXXXXXRSVKPPILSCFGDIALAIGVHFEKYVPHALQMMQEAAKACAQLDMEDEELIDYGNQLRSSIFEAYSGILQGFK 694 IM RL Q L+++ I S+ DR + DLQ+ LC LQ +++K DA LQ +D +M LR+F S V E+A++A+ L G EF KYM F +L +GL+N EYQVC VG+VGD+CRAL +LPFCD +M RSVKP ILS FGDIALAIG F+KY+ L +Q+A++ AQ+D D +++DY N+LR S EAY+GI+QG K Sbjct: 554 IMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDA-----LQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQ--AQVDKSDFDMVDYLNELRESCLEAYTGIVQGLK 777
BLAST of CV885691 vs. ExPASy Swiss-Prot
Match: IMB1_HUMAN (Importin subunit beta-1 OS=Homo sapiens GN=KPNB1 PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 7.952e-46 Identity = 104/231 (45.02%), Postives = 141/231 (61.04%), Query Frame = 2 Query: 14 IMGRLGQTLELQ--IVSSDDREKQGDLQASLCGVLQVIIQKFSSTDATKSFILQTADQIMVLFLRVF--ACRSSTVHEEAMLAIGALAYATGPEFAKYMPEFYQYLQMGLQNSEEYQVCAITVGVVGDVCRALDDKVLPFCDGIMXXXXXXXXXXXXXRSVKPPILSCFGDIALAIGVHFEKYVPHALQMMQEAAKACAQLDMEDEELIDYGNQLRSSIFEAYSGILQGFK 694 IM RL Q L+++ I S+ DR + DLQ+ LC LQ +++K DA LQ +D +M LR+F S V E+A++A+ L G EF KYM F +L +GL+N EYQVC VG+VGD+CRAL ++PFCD +M RSVKP ILS FGDIALAIG F+KY+ L +Q+A++ AQ+D D +++DY N+LR S EAY+GI+QG K Sbjct: 554 IMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDA-----LQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQ--AQVDKSDYDMVDYLNELRESCLEAYTGIVQGLK 777
BLAST of CV885691 vs. ExPASy Swiss-Prot
Match: IMB1_RAT (Importin subunit beta-1 OS=Rattus norvegicus GN=Kpnb1 PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.363e-44 Identity = 103/231 (44.59%), Postives = 138/231 (59.74%), Query Frame = 2 Query: 14 IMGRLGQTLELQ--IVSSDDREKQGDLQASLCGVLQVIIQKFSSTDATKSFILQTADQIMVLFLRVF--ACRSSTVHEEAMLAIGALAYATGPEFAKYMPEFYQYLQMGLQNSEEYQVCAITVGVVGDVCRALDDKVLPFCDGIMXXXXXXXXXXXXXRSVKPPILSCFGDIALAIGVHFEKYVPHALQMMQEAAKACAQLDMEDEELIDYGNQLRSSIFEAYSGILQGFK 694 IM RL Q L+++ I S+ DR + DLQ+ LC LQ ++ K DA LQ +D +M LR+F S V E+A++A+ L G EF KYM F +L +GL+N E QVC VG+VGD+CRAL +LPFCD +M RSVKP ILS FGDI LAIG F+KY+ L +Q+A++ AQ+D D +++DY N+LR S EAY+GI+QG K Sbjct: 553 IMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLWKVQHQDA-----LQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAECQVCLAAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDITLAIGGEFKKYLEVVLNTLQQASQ--AQVDKSDFDMVDYLNELRESCLEAYTGIVQGLK 776
BLAST of CV885691 vs. ExPASy Swiss-Prot
Match: IMB_DROME (Importin subunit beta OS=Drosophila melanogaster GN=Fs(2)Ket PE=1 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 2.647e-41 Identity = 98/232 (42.24%), Postives = 136/232 (58.62%), Query Frame = 2 Query: 14 IMGRLGQTLEL--QIVSSDDREKQGDLQASLCGVLQVIIQKFSSTDATKSFILQTADQIMVLFLRVF---ACRSSTVHEEAMLAIGALAYATGPEFAKYMPEFYQYLQMGLQNSEEYQVCAITVGVVGDVCRALDDKVLPFCDGIMXXXXXXXXXXXXXRSVKPPILSCFGDIALAIGVHFEKYVPHALQMMQEAAKACAQLDMEDEELIDYGNQLRSSIFEAYSGILQGFK 694 I+ RL Q +++ QI + DR + DLQ+ LC LQ +++K DA Q +D IM L +F A +S V EEA LA+ L G +FAKYMP F +L MGL+N +EYQVC VG+ GD+ RAL D ++P+ + IM R+VKP +LS FGDIAL+IG HF Y+ L M++ A+ Q D + ++ +Y N+LR SI EAY+GI+QG K Sbjct: 559 ILERLNQVMQMETQINNHSDRHQFNDLQSLLCATLQSVLRKVHEQDAP-----QISDAIMTALLTMFNSSAGKSGVVQEEAFLAVSTLVELLGAQFAKYMPAFKDFLVMGLKNFQEYQVCCAAVGLTGDIFRALKDLMVPYSNEIMTVLINNLTEPTIHRTVKPQVLSAFGDIALSIGNHFLPYLSMVLDMLRVASN--LQTDANNFDMNEYINELRESILEAYTGIIQGLK 783
BLAST of CV885691 vs. ExPASy Swiss-Prot
Match: IMB1_SCHPO (Importin subunit beta-1 OS=Schizosaccharomyces pombe GN=kap95 PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.606e-38 Identity = 93/235 (39.57%), Postives = 136/235 (57.87%), Query Frame = 2 Query: 2 LLPAIMGRLGQTLELQ--IVSSDDREKQGDLQASLCGVLQVIIQKFSSTDATKSFILQTADQIMVLFLRVF--ACRSSTVHEEAMLAIGALAYATGPEFAKYMPEFYQYLQMGLQNSEEYQVCAITVGVVGDVCRALDDKVLPFCDGIMXXXXXXXXXXXXXRSVKPPILSCFGDIALAIGVHFEKYVPHALQMMQEAAKACAQLDMEDEELIDYGNQLRSSIFEAYSGILQGFK 694 +L I+ RL ++++Q I+ +DR +LQ++LC VL II++F T S DQIM L L+ A + S VHE+ +LAIGA+ + +F Y+P F +L L N +EYQ+C++ VG+VGD+ RAL+ K+LP+CD M R+VKP ILSCF DIALAIG F+ Y+ + ++Q+A+ A + +IDY + LR I EAY GI Q + Sbjct: 542 VLSIILTRLETSIQMQSQILDVEDRANHDELQSNLCNVLTSIIRRFGPDIRTSS------DQIMNLLLQTMQTAPKQSVVHEDVLLAIGAMMNSLEEQFEVYVPSFVPFLSSALSNEQEYQLCSVAVGLVGDLARALNAKILPYCDDFMTRLVQDLQSSVLDRNVKPAILSCFSDIALAIGAAFQTYLEAVMVLLQQASSVQAP-PGANFSMIDYVDALRLGIVEAYVGITQAVR 769
BLAST of CV885691 vs. ExPASy Swiss-Prot
Match: IMB1_YEAST (Importin subunit beta-1 OS=Saccharomyces cerevisiae GN=KAP95 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 64/228 (28.07%), Postives = 110/228 (48.25%), Query Frame = 2 Query: 14 IMGRLGQTLELQI--VSSDDREKQGDLQASLCGVLQVIIQKFSSTDATKSFILQTADQIMVLFLRVFACRSST-VHEEAMLAIGALAYATGPEFAKYMPEFYQYLQMGLQNSEEYQVCAITVGVVGDVCRALDDKVLPFCDGIMXXXXXXXXXXXXXRSVKPPILSCFGDIALAIGVHFEKYVPHALQMMQEAAKACAQLDMEDEELIDYGNQLRSSIFEAYSGILQG 688 +M +LGQT+ + ++ +D + +LQ+++ VL +I+K S+ + AD +M LF R+ + S + ++ AI ALA + G F KY+ F YL L N + V VG + D+ +L++ + D +M R +KP +LS FGDIA IG F Y+ + + A + + E +DY ++ ++ +AY GI+ G Sbjct: 546 VMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVIRKSPSS------VEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKAL-NQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQN--TKPENGTLEALDYQIKVLEAVLDAYVGIVAG 764 The following BLAST results are available for this feature:
BLAST of CV885691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885691 ID=CV885691; Name=CV885691; organism=Citrus sinensis; type=EST; length=694bpback to top |