CV885681

Overview
NameCV885681
Unique NameCV885681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length781
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885681 vs. ExPASy Swiss-Prot
Match: C94A2_VICSA (Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.232e-25
Identity = 67/186 (36.02%), Postives = 101/186 (54.30%), Query Frame = -2
Query:  220 TFLFKGPWFANMDILATVDPANVHHIMSSNFSNFPRGPEF-KRIFDILGDGIFNSDSDLWKNQRRFAQALMNRHSFCKFLVKSNQAKLEKGLIPILDHMSKQGTTVDLQDLFQRFTFDSTSLFVTGYDPGCLSIEFPKVRFLMALEDAEE-SIFYRHVVPESLWKLQRWLGIGEEKKFDSTS*ETR 771
            TF+   P+ A    + T  PA V HI+ +NF+ + +G  F + I D LGDGIFN+D + WK QR+ +    N  S  KF+      +L   L+P+L   S   TT+D QD+ QR TFD+  +   GYDP  L    P++ F  A +++ + SI   + +   LWK++R+L IG E++      E R
Sbjct:   77 TFVLHRPFGARQ--VFTAQPAVVQHILRTNFTCYGKGLTFYQSINDFLGDGIFNADGESWKFQRQISSHEFNTRSLRKFVETVVDVELSDRLVPVLSQASNSQTTLDFQDILQRLTFDNICMIAFGYDPEYLLPSLPEIPFAKAFDESSQLSIERLNALIPLLWKVKRFLNIGVERQLKEAVAEVR 260          
BLAST of CV885681 vs. ExPASy Swiss-Prot
Match: C86A1_ARATH (Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CYP86A1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.042e-23
Identity = 60/160 (37.50%), Postives = 86/160 (53.75%), Query Frame = -2
Query:  247 TVDPANVHHIMSSNFSNFPRGPEFKRIF-DILGDGIFNSDSDLWKNQRRFAQALMNRHSFCKFLVKSNQAKLEKGLIPILDHMSKQGTTVDLQDLFQRFTFDSTSLFVTGYDPGCLSIEFPKVRFLMALEDAEESIFYRHVVPESLWKLQRWLGIGEEKK 723
            T  P NV HI+ + F N+P+GP ++  F D+LG GIFNSD D W  QR+ A       +  + + +     ++  L  ILD   +    VDLQDLF R TFD+      G DP  LS++ P   F +A + A E+   R +    LW++Q+ +GIG E K
Sbjct:   87 TCHPKNVEHILKTRFDNYPKGPMWRAAFHDLLGQGIFNSDGDTWLMQRKTAALEFTTRTLRQAMARWVNGTIKNRLWLILDRAVQNNKPVDLQDLFLRLTFDNICGLTFGKDPETLSLDLPDNPFSVAFDTATEATLKRLLYTGFLWRIQKAMGIGSEDK 246          
BLAST of CV885681 vs. ExPASy Swiss-Prot
Match: C86A2_ARATH (Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CYP86A2 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.961e-23
Identity = 60/170 (35.29%), Postives = 89/170 (52.35%), Query Frame = -2
Query:  253 PWFANMDILATV--DPANVHHIMSSNFSNFPRGPEFKRIF-DILGDGIFNSDSDLWKNQRRFAQALMNRHSFCKFLVKSNQAKLEKGLIPILDHMSKQGTTVDLQDLFQRFTFDSTSLFVTGYDPGCLSIEFPKVRFLMALEDAEESIFYRHVVPESLWKLQRWLGIGEE 753
            P+ A    L TV  DP N+ H++ + F N+P+GP ++ +F D LG GIFNSD D W  QR+ A       +  + + +     ++    PIL+        VDLQDL  R TFD+      G D    +   P+  F  A + A E+   R ++PE LW+L++WLG+G E
Sbjct:   72 PFLAKKQGLVTVTCDPKNIEHMLKTRFDNYPKGPTWQAVFHDFLGQGIFNSDGDTWLFQRKTAALEFTTRTLRQAMGRWVNRGIKLRFCPILETAQNNYEPVDLQDLILRLTFDNICGLAFGKDTRTCAPGLPENGFASAFDRATEASLQRFILPEFLWRLKKWLGLGLE 241          
BLAST of CV885681 vs. ExPASy Swiss-Prot
Match: C94A1_VICSA (Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 4.380e-22
Identity = 61/172 (35.47%), Postives = 89/172 (51.74%), Query Frame = -2
Query:  220 LATVDPANVHHIMSSNFSNFPRGPEFKR-IFDILGDGIFNSDSDLWKNQRRFAQALMNRHSFCKFLVKSNQAKLEKGLIPILDHMSKQGTTVDLQDLFQRFTFDSTSLFVTGYDPGCLSIEFPKVRFLMALEDAEESIFYRHVVP-ESLWKLQRWLGIGEEKKFDSTS*ETR 729
            + T +P+ V HI+ + FSN+ +G  F   + D LG GIFN++   WK QR+ A    N  S   F+      +L   LIPIL   ++    +D QD+ QRFTFD+      GYDP  L+    + +F  A EDA E    R  +P   +WK++++  IG EK+      E R
Sbjct:   94 IITGNPSTVQHILKNQFSNYQKGTTFTNTLSDFLGTGIFNTNGPNWKFQRQVASHEFNTKSIRNFVEHIVDTELTNRLIPILTSSTQTNNILDFQDILQRFTFDNICNIAFGYDPEYLTPSTNRSKFAEAYEDATEISSKRFRLPLPIIWKIKKYFNIGSEKRLKEAVTEVR 265          

HSP 2 Score: 68.5514 bits (166), Expect = 4.512e-11
Identity = 30/64 (46.88%), Postives = 42/64 (65.62%), Query Frame = -3
Query:    3 KLNQLVYLHGALCEALRLYPPVPFQHKVPLVPDTLPSGHRAVPRTKILFSLYAMGRMKSIWGED 194
            ++ ++VY H AL E++RLYPPVP   K  +  D LP G      T + + +YAMGRMKS+WG+D
Sbjct:  356 EVKEMVYTHAALSESMRLYPPVPMDSKEAVNDDVLPDGWVVKKGTIVTYHVYAMGRMKSLWGDD 419          
BLAST of CV885681 vs. ExPASy Swiss-Prot
Match: C04C1_PINTA (Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 5.354e-20
Identity = 62/165 (37.58%), Postives = 87/165 (52.73%), Query Frame = -2
Query:  253 TVDPANVHHIMSSNFSNFPRGP-EFKRIFDILGDGIFNSDSDLWKNQRRFAQ---ALMNRHSFCKFLVKSNQAKLEKGLIPILDHMSKQGTTVDLQDLFQRFTFDSTSLFVTGYDPGCLSI----EFPKVRFLMALEDAEESIFYRHVVPESLWKLQRWLGIGEE 723
            T DP NV HI+ +NF+N+ +G   +  + D+LGDGIFN D D W+ QR+ A    A      F   +  +N AKL      IL   +K   +V++QDLF R + DS    V G D   LS       P+  F  A + A   +F+RH+V  S WK+QR+  +G E
Sbjct:   79 TTDPVNVEHILKTNFANYDKGTFNYDIMKDLLGDGIFNVDGDKWRQQRKLASSEFASKVLKDFSSGVFCNNAAKLAN----ILAQAAKLNLSVEMQDLFMRSSLDSICKVVFGIDINSLSSSKAESGPEASFAKAFDVANAMVFHRHMV-GSFWKVQRFFNVGSE 238          
BLAST of CV885681 vs. ExPASy Swiss-Prot
Match: CP52D_CANMA (Cytochrome P450 52A4 OS=Candida maltosa GN=CYP52A4 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.663e-11
Identity = 57/191 (29.84%), Postives = 91/191 (47.64%), Query Frame = -2
Query:  181 MDILATVDPANVHHIMSSNFSNFPRGPEFKRIFDILGDGIFNSDSDLWKNQRRFAQALMNRHSFCKFLVKSNQAKLEKGLIPILDHMSK-QGTTVDLQDLFQRFTFDSTSLFVTGYDPGCL---SIEF-PKVRFLMALEDAEESIFYRHVVPESLWKLQRWLGIGEEKKFDSTS*ETRKMVGF*HAKAKSI 738
            ++I+ T DP NV  I+++ F++F  G     ++ +LGDGIF  D   WK+ R      M R  F +  V ++   LE  +  +  H+ K QG T D+Q+LF R T DS++ F+ G     L   SI   P  + +   E+  ++  Y        + LQ++  I    KF+ +     K   F   KA S+
Sbjct:  113 LNIIETTDPENVKAILATQFNDFSLGTRHDFLYSLLGDGIFTLDGAGWKHSR-----AMLRPQFAREQV-AHVKLLEPHVQVLFKHVRKSQGKTFDIQELFFRLTVDSSTEFLFGGSVESLRDASIGMVPSTKNIAGREEFADAFNYSQTYNAYRFLLQQFYWILNGSKFNKSIKTVHKFADFYVQKALSL 297          
The following BLAST results are available for this feature:
BLAST of CV885681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
C94A2_VICSA4.232e-2536.02Cytochrome P450 94A2 OS=Vicia sativa GN=CYP94A2 PE... [more]
C86A1_ARATH1.042e-2337.50Cytochrome P450 86A1 OS=Arabidopsis thaliana GN=CY... [more]
C86A2_ARATH3.961e-2335.29Cytochrome P450 86A2 OS=Arabidopsis thaliana GN=CY... [more]
C94A1_VICSA4.380e-2235.47Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE... [more]
C04C1_PINTA5.354e-2037.58Cytochrome P450 704C1 OS=Pinus taeda GN=CYP704C1 P... [more]
CP52D_CANMA2.663e-1129.84Cytochrome P450 52A4 OS=Candida maltosa GN=CYP52A4... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_019B11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_019_T3_B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885681 ID=CV885681; Name=CV885681; organism=Citrus sinensis; type=EST; length=781bp
CAATCTTCTCCCCATATTGACTTCATTCTCCCCATTGCATACAGAGAAAA
CAAGATCTTTGTTCTCGGAACGGCGCGGTGTCCGCTTGGAAGAGTGTCTG
GCACTAAAGGAACTTTATGCTGAAAAGGAACTGGTGGGTAAAGCCTTAAT
GCTTCACACAAAGCGCCATGTAAATAAACCAATTGATTTAGCTTTTGCGT
GTCAAAATCCCACCATTTTCCGAGTTTCTCAGCTGGTACTATCGAATTTC
TTTTCTTCTCCAATTCCAAGCCATCTTTGTAGCTTCCACAAGCTTTCCGG
AACAACATGCCGATAAAATATTGATTCCTCGGCATCTTCCAATGCCATTA
GGAATCGAACTTTTGGAAATTCAATTGACAAACAACCAGGATCATAGCCT
GTAACAAATAAGCTCGTAGAATCAAACGTAAACCTCTGGAACAAATCCTG
CAGATCAACTGTTGTGCCTTGTTTGGACATGTGATCAAGAATTGGAATCA
GCCCTTTCTCCAGTTTAGCTTGATTGGATTTCACCAAAAACTTGCAGAAG
CTATGACGATTCATCAAAGCTTGAGCAAACCTTCTTTGGTTTTTCCACAA
ATCTGAGTCGGAGTTGAAAATCCCATCTCCTAAAATATCAAAGATTCGCT
TGAACTCTGGCCCTCTCGGGAAATTTGAGAAGTTTGAGCTCATTATGTGA
TGTACGTTGGCTGGATCAACTGTGGCCAATATGTCCATGTTTGCGAACCA
AGGACCTTTGAATAAAAATGTGCATTGCGTT
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