CV885572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP12_MAIZE (Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.699e-64 Identity = 126/231 (54.55%), Postives = 156/231 (67.53%), Query Frame = 3 Query: 51 AMGP-VKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740 AMG ++AAA D V+TF+WV ST G TT + S L + G+ + +L+T + +ALGGASFNPTG AAFYA GV S SL S+ALR P I E MP +Y+HMLGGPSL+VD HTGA AE +LTF+IT AVL+I++KGP++ I+KTW G+AYTGPSMNPANAFGWAYVN H+TW+QFYVYWICPFIGA+ A+ IFR +F Sbjct: 2 AMGEALRAAAADAVVTFLWVLCVSTLGASTTAVTSYLRLQGVHFA-LLVTVSLLSVLLFVFNILCDALGGASFNPTGVAAFYAAGVTSPSLFSIALRLPAQAAGAVGGALAISELMPAQYRHMLGGPSLKVDPHTGAGAELVLTFVITLAVLLIIVKGPRNPIIKTWMISICTLCLVLSGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGAILAAWIFRAMF 231
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP11_ORYSJ (Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica GN=SIP1-1 PE=2 SV=2) HSP 1 Score: 240.35 bits (612), Expect = 1.072e-62 Identity = 122/233 (52.36%), Postives = 151/233 (64.81%), Query Frame = 3 Query: 51 AMGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGS---DSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740 A+ V+AAA D +TF+WV ST G T + S L +H + +L+T + +ALGGASFNPT AAF+A G+ S SL +ALRFP I E MP +YKHMLGGPSL+VDLHTGA AE +LTF+IT AVL I++KGP++ I+KTW G+AYTGPSMNPANAFGWAYVN H+TW+QFYVYWICPF+GAV A+ +FR VF Sbjct: 2 AVAAVRAAAADAAVTFLWVLCVSTLGASTAAVTSYLRIHEGIHYALLVTVSLLSVLLFAFNLLCDALGGASFNPTALAAFHAAGLSSPRHSSLFPLALRFPAQAAGAVGGAMAISELMPEQYKHMLGGPSLKVDLHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVF 234
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP11_MAIZE (Aquaporin SIP1-1 OS=Zea mays GN=SIP1-1 PE=2 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 2.022e-61 Identity = 125/232 (53.88%), Postives = 149/232 (64.22%), Query Frame = 3 Query: 51 AMGP-VKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVH-GLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740 AMG V+AAA D V+TF+WV +S G T + S LGV G +L+TT+ ALGGASFNPT AA YA G+ S SL S+ALRFP I E MP +YKH L GPSL+VD HTGA+AEG+LTF+IT VL +++KGP++ ILKT G+ YTGPSMNPANAFGWAYVN WH+TW+Q YVYWICPFIGA+ A IFRVVF Sbjct: 2 AMGATVRAAAADAVVTFLWVLCASALGASTAAVTSYLGVQEGAGHYALLVTTSLLSVLLFTFDLLCGALGGASFNPTDFAASYAAGLDSPSLFSVALRFPAQAAGAVGGALAISELMPAQYKHTLAGPSLKVDPHTGALAEGVLTFVITLTVLWVIVKGPRNVILKTLLLSTSIVSVILAGAEYTGPSMNPANAFGWAYVNNWHNTWEQLYVYWICPFIGAMLAGWIFRVVF 233
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP11_ARATH (Aquaporin SIP1-1 OS=Arabidopsis thaliana GN=SIP1-1 PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.893e-59 Identity = 112/229 (48.91%), Postives = 150/229 (65.50%), Query Frame = 3 Query: 54 MGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740 MG +K+A GD+++TF WV +S+TFG+ T I SA + W P++I T+ G ASFNPTG+AAFY GV D+L S+A+R P IME++P KYKHM+GGPSLQVD+HTGAIAE +L+F ITFAVL+I+L+GP+ + KT+ GS YTGP+MNPA AFGWAY+ H+TWD YVYWI F+GA++A+++FR +F Sbjct: 2 MGVLKSAIGDMLMTFSWVVLSATFGIQTAAIISAGDFQAITWAPLVILTSLIFVYVSIFTVI---FGSASFNPTGSAAFYVAGVPGDTLFSLAIRLPAQAIGAAGGALAIMEFIPEKYKHMIGGPSLQVDVHTGAIAETILSFGITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYTGPAMNPAIAFGWAYMYSSHNTWDHIYVYWISSFVGALSAALLFRSIF 227
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP12_ARATH (Probable aquaporin SIP1-2 OS=Arabidopsis thaliana GN=SIP1-2 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 2.472e-59 Identity = 111/230 (48.26%), Postives = 147/230 (63.91%), Query Frame = 3 Query: 54 MGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGG-PSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740 M VK+A GD+V+TF+WV +S+TFG+ T I SA+G HG+ W P++I+T G LGGASFNP G AAFY GV SDSL S+A+R P IME +P KYK +GG PSLQ H GAI+E +L+F +TF VL+I+L+GP+ + KT+ GS +T P MNPA AFGWAY+ K H+TWD FYVYWI + GA+ ++M+FR++F Sbjct: 1 MSAVKSALGDMVITFLWVILSATFGIQTAAIVSAVGFHGITWAPLVISTLVVFVSISIFTVIGNVLGGASFNPCGNAAFYTAGVSSDSLFSLAIRSPAQAIGAAGGAITIMEMIPEKYKTRIGGKPSLQFGAHNGAISEVVLSFSVTFLVLLIILRGPRKLLAKTFLLALATVSVFVVGSKFTRPFMNPAIAFGWAYIYKSHNTWDHFYVYWISSYTGAILSAMLFRIIF 230
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP21_ARATH (Probable aquaporin SIP2-1 OS=Arabidopsis thaliana GN=SIP2-1 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 3.266e-19 Identity = 67/229 (29.26%), Postives = 91/229 (39.74%), Query Frame = 3 Query: 54 MGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740 MG + DLVL+FMW++ +L + LG ++ +A G +NP A G S + S+ +R P I+ P K GP L V +H GA+ EG+LTF I + + K P S +KTW GS TG MNPA GWAY H T + VYW+ P + A F+VVF Sbjct: 1 MGRIGLVVTDLVLSFMWIWAGVLVNIL---VHGVLGFSRTDPSGEIVRYLFSIISMFIFAYLQQATKGGLYNPLTALAAGVSGGFSSFIFSVFVRIPVEVIGSILAVKHIIHVFPEIGK----GPKLNVAIHHGALTEGILTFFIVLLSMGLTRKIPGSFFMKTWIGSLAKLTLHILGSDLTGGCMNPAAVMGWAYARGEHITKEHLLVYWLGPVKATLLAVWFFKVVF 222
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP21_ORYSJ (Aquaporin SIP2-1 OS=Oryza sativa subsp. japonica GN=SIP2-1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.375e-15 Identity = 63/210 (30.00%), Postives = 82/210 (39.05%), Query Frame = 3 Query: 78 GDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPML--ITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMA--LRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICP 695 GDLV+ MWV + + + GV GL P + A GGAS+NP A SL A +R P I +P K G L V +H GA+AEGL TF++ + + K + +KTW S TG MNPA+AF WAY H T+D VYW+ P Sbjct: 19 GDLVVAAMWVCAGALVKL------AVYGVLGLGGRPEADAVKVALSLVYMFFFAWLEGFTGGASYNPLTVLAGALASRAGPSLYLFAAFVRMPAQVFGSILGVKLIRAALPKVGK----GAPLSVGVHHGALAEGLATFMVVIVSVTLKKKEMKGFFMKTWISSIWKMTFHLLSSDITGGVMNPASAFAWAYARGDHTTFDHLLVYWLAP 218
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP21_MAIZE (Aquaporin SIP2-1 OS=Zea mays GN=SIP2-1 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.422e-14 Identity = 61/208 (29.33%), Postives = 80/208 (38.46%), Query Frame = 3 Query: 78 GDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDS--LLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICP 695 GDL L WV + +L + LG+ G + + A GGAS+NP A G + L + R P I P K G L V H GA+AEGL TF++ + + K +S +KTW S TG MNPA+AF WAY H T+D VYW+ P Sbjct: 17 GDLALAAAWVCAGALVKLL---VYGGLGLGGRP-EAEAVKVSLSLVYMFLFAWLEAASGGASYNPLTVLAAALASHGGPAVYLFTAFARIPAQVIGAVLGVKLIQVTFPNVGK----GARLSVGAHHGALAEGLATFMVVMVSVTLKKKEMKSFFMKTWITSIWKNTIHLLSSDITGGIMNPASAFAWAYARGDHTTFDHLLVYWLAP 216 The following BLAST results are available for this feature:
BLAST of CV885572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885572 ID=CV885572; Name=CV885572; organism=Citrus sinensis; type=EST; length=889bpback to top |