CV885572

Overview
NameCV885572
Unique NameCV885572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP12_MAIZE (Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 9.699e-64
Identity = 126/231 (54.55%), Postives = 156/231 (67.53%), Query Frame = 3
Query:   51 AMGP-VKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740
            AMG  ++AAA D V+TF+WV   ST G  TT + S L + G+ +  +L+T +             +ALGGASFNPTG AAFYA GV S SL S+ALR P            I E MP +Y+HMLGGPSL+VD HTGA AE +LTF+IT AVL+I++KGP++ I+KTW            G+AYTGPSMNPANAFGWAYVN  H+TW+QFYVYWICPFIGA+ A+ IFR +F
Sbjct:    2 AMGEALRAAAADAVVTFLWVLCVSTLGASTTAVTSYLRLQGVHFA-LLVTVSLLSVLLFVFNILCDALGGASFNPTGVAAFYAAGVTSPSLFSIALRLPAQAAGAVGGALAISELMPAQYRHMLGGPSLKVDPHTGAGAELVLTFVITLAVLLIIVKGPRNPIIKTWMISICTLCLVLSGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFIGAILAAWIFRAMF 231          
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP11_ORYSJ (Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica GN=SIP1-1 PE=2 SV=2)

HSP 1 Score: 240.35 bits (612), Expect = 1.072e-62
Identity = 122/233 (52.36%), Postives = 151/233 (64.81%), Query Frame = 3
Query:   51 AMGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGS---DSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740
            A+  V+AAA D  +TF+WV   ST G  T  + S L +H  +   +L+T +             +ALGGASFNPT  AAF+A G+ S    SL  +ALRFP            I E MP +YKHMLGGPSL+VDLHTGA AE +LTF+IT AVL I++KGP++ I+KTW            G+AYTGPSMNPANAFGWAYVN  H+TW+QFYVYWICPF+GAV A+ +FR VF
Sbjct:    2 AVAAVRAAAADAAVTFLWVLCVSTLGASTAAVTSYLRIHEGIHYALLVTVSLLSVLLFAFNLLCDALGGASFNPTALAAFHAAGLSSPRHSSLFPLALRFPAQAAGAVGGAMAISELMPEQYKHMLGGPSLKVDLHTGAAAELVLTFVITLAVLWIIVKGPRNPIVKTWMLSISTVCLVLTGAAYTGPSMNPANAFGWAYVNNRHNTWEQFYVYWICPFVGAVLAAWVFRAVF 234          
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP11_MAIZE (Aquaporin SIP1-1 OS=Zea mays GN=SIP1-1 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 2.022e-61
Identity = 125/232 (53.88%), Postives = 149/232 (64.22%), Query Frame = 3
Query:   51 AMGP-VKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVH-GLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740
            AMG  V+AAA D V+TF+WV  +S  G  T  + S LGV  G     +L+TT+              ALGGASFNPT  AA YA G+ S SL S+ALRFP            I E MP +YKH L GPSL+VD HTGA+AEG+LTF+IT  VL +++KGP++ ILKT             G+ YTGPSMNPANAFGWAYVN WH+TW+Q YVYWICPFIGA+ A  IFRVVF
Sbjct:    2 AMGATVRAAAADAVVTFLWVLCASALGASTAAVTSYLGVQEGAGHYALLVTTSLLSVLLFTFDLLCGALGGASFNPTDFAASYAAGLDSPSLFSVALRFPAQAAGAVGGALAISELMPAQYKHTLAGPSLKVDPHTGALAEGVLTFVITLTVLWVIVKGPRNVILKTLLLSTSIVSVILAGAEYTGPSMNPANAFGWAYVNNWHNTWEQLYVYWICPFIGAMLAGWIFRVVF 233          
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP11_ARATH (Aquaporin SIP1-1 OS=Arabidopsis thaliana GN=SIP1-1 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.893e-59
Identity = 112/229 (48.91%), Postives = 150/229 (65.50%), Query Frame = 3
Query:   54 MGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740
            MG +K+A GD+++TF WV +S+TFG+ T  I SA     + W P++I T+                G ASFNPTG+AAFY  GV  D+L S+A+R P            IME++P KYKHM+GGPSLQVD+HTGAIAE +L+F ITFAVL+I+L+GP+  + KT+            GS YTGP+MNPA AFGWAY+   H+TWD  YVYWI  F+GA++A+++FR +F
Sbjct:    2 MGVLKSAIGDMLMTFSWVVLSATFGIQTAAIISAGDFQAITWAPLVILTSLIFVYVSIFTVI---FGSASFNPTGSAAFYVAGVPGDTLFSLAIRLPAQAIGAAGGALAIMEFIPEKYKHMIGGPSLQVDVHTGAIAETILSFGITFAVLLIILRGPRRLLAKTFLLALATISFVVAGSKYTGPAMNPAIAFGWAYMYSSHNTWDHIYVYWISSFVGALSAALLFRSIF 227          
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP12_ARATH (Probable aquaporin SIP1-2 OS=Arabidopsis thaliana GN=SIP1-2 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.472e-59
Identity = 111/230 (48.26%), Postives = 147/230 (63.91%), Query Frame = 3
Query:   54 MGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGG-PSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740
            M  VK+A GD+V+TF+WV +S+TFG+ T  I SA+G HG+ W P++I+T             G  LGGASFNP G AAFY  GV SDSL S+A+R P            IME +P KYK  +GG PSLQ   H GAI+E +L+F +TF VL+I+L+GP+  + KT+            GS +T P MNPA AFGWAY+ K H+TWD FYVYWI  + GA+ ++M+FR++F
Sbjct:    1 MSAVKSALGDMVITFLWVILSATFGIQTAAIVSAVGFHGITWAPLVISTLVVFVSISIFTVIGNVLGGASFNPCGNAAFYTAGVSSDSLFSLAIRSPAQAIGAAGGAITIMEMIPEKYKTRIGGKPSLQFGAHNGAISEVVLSFSVTFLVLLIILRGPRKLLAKTFLLALATVSVFVVGSKFTRPFMNPAIAFGWAYIYKSHNTWDHFYVYWISSYTGAILSAMLFRIIF 230          
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP21_ARATH (Probable aquaporin SIP2-1 OS=Arabidopsis thaliana GN=SIP2-1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.266e-19
Identity = 67/229 (29.26%), Postives = 91/229 (39.74%), Query Frame = 3
Query:   54 MGPVKAAAGDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICPFIGAVAASMIFRVVF 740
            MG +     DLVL+FMW++      +L   +   LG         ++                +A  G  +NP    A    G  S  + S+ +R P            I+   P   K    GP L V +H GA+ EG+LTF I    + +  K P S  +KTW            GS  TG  MNPA   GWAY    H T +   VYW+ P    + A   F+VVF
Sbjct:    1 MGRIGLVVTDLVLSFMWIWAGVLVNIL---VHGVLGFSRTDPSGEIVRYLFSIISMFIFAYLQQATKGGLYNPLTALAAGVSGGFSSFIFSVFVRIPVEVIGSILAVKHIIHVFPEIGK----GPKLNVAIHHGALTEGILTFFIVLLSMGLTRKIPGSFFMKTWIGSLAKLTLHILGSDLTGGCMNPAAVMGWAYARGEHITKEHLLVYWLGPVKATLLAVWFFKVVF 222          
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP21_ORYSJ (Aquaporin SIP2-1 OS=Oryza sativa subsp. japonica GN=SIP2-1 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.375e-15
Identity = 63/210 (30.00%), Postives = 82/210 (39.05%), Query Frame = 3
Query:   78 GDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPML--ITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDSLLSMA--LRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICP 695
            GDLV+  MWV   +   +      +  GV GL   P    +  A                GGAS+NP    A         SL   A  +R P            I   +P   K    G  L V +H GA+AEGL TF++    + +  K  +   +KTW             S  TG  MNPA+AF WAY    H T+D   VYW+ P
Sbjct:   19 GDLVVAAMWVCAGALVKL------AVYGVLGLGGRPEADAVKVALSLVYMFFFAWLEGFTGGASYNPLTVLAGALASRAGPSLYLFAAFVRMPAQVFGSILGVKLIRAALPKVGK----GAPLSVGVHHGALAEGLATFMVVIVSVTLKKKEMKGFFMKTWISSIWKMTFHLLSSDITGGVMNPASAFAWAYARGDHTTFDHLLVYWLAP 218          
BLAST of CV885572 vs. ExPASy Swiss-Prot
Match: SIP21_MAIZE (Aquaporin SIP2-1 OS=Zea mays GN=SIP2-1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.422e-14
Identity = 61/208 (29.33%), Postives = 80/208 (38.46%), Query Frame = 3
Query:   78 GDLVLTFMWVFVSSTFGVLTTEIASALGVHGLVWPPMLITTAXXXXXXXXXXXXGEALGGASFNPTGTAAFYAVGVGSDS--LLSMALRFPXXXXXXXXXXXXIMEYMPPKYKHMLGGPSLQVDLHTGAIAEGLLTFLITFAVLVIMLKGPQSNILKTWXXXXXXXXXXXXGSAYTGPSMNPANAFGWAYVNKWHDTWDQFYVYWICP 695
            GDL L   WV   +   +L   +   LG+ G       +  +              A GGAS+NP    A      G  +  L +   R P            I    P   K    G  L V  H GA+AEGL TF++    + +  K  +S  +KTW             S  TG  MNPA+AF WAY    H T+D   VYW+ P
Sbjct:   17 GDLALAAAWVCAGALVKLL---VYGGLGLGGRP-EAEAVKVSLSLVYMFLFAWLEAASGGASYNPLTVLAAALASHGGPAVYLFTAFARIPAQVIGAVLGVKLIQVTFPNVGK----GARLSVGAHHGALAEGLATFMVVMVSVTLKKKEMKSFFMKTWITSIWKNTIHLLSSDITGGIMNPASAFAWAYARGDHTTFDHLLVYWLAP 216          
The following BLAST results are available for this feature:
BLAST of CV885572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SIP12_MAIZE9.699e-6454.55Aquaporin SIP1-2 OS=Zea mays GN=SIP1-2 PE=2 SV=1[more]
SIP11_ORYSJ1.072e-6252.36Aquaporin SIP1-1 OS=Oryza sativa subsp. japonica G... [more]
SIP11_MAIZE2.022e-6153.88Aquaporin SIP1-1 OS=Zea mays GN=SIP1-1 PE=2 SV=1[more]
SIP11_ARATH1.893e-5948.91Aquaporin SIP1-1 OS=Arabidopsis thaliana GN=SIP1-1... [more]
SIP12_ARATH2.472e-5948.26Probable aquaporin SIP1-2 OS=Arabidopsis thaliana ... [more]
SIP21_ARATH3.266e-1929.26Probable aquaporin SIP2-1 OS=Arabidopsis thaliana ... [more]
SIP21_ORYSJ6.375e-1530.00Aquaporin SIP2-1 OS=Oryza sativa subsp. japonica G... [more]
SIP21_MAIZE2.422e-1429.33Aquaporin SIP2-1 OS=Zea mays GN=SIP2-1 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_016D12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_016_T3_D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885572 ID=CV885572; Name=CV885572; organism=Citrus sinensis; type=EST; length=889bp
GGCTTCTTCTACTTTTCACTTTCTTTTTTTCATTTTTTTTCCTTTTTTCA
GCGATGGGTCCGGTAAAGGCAGCAGCGGGCGATCTGGTGCTGACGTTTAT
GTGGGTATTTGTGTCGTCAACCTTCGGTGTTTTGACGACTGAGATTGCCT
CCGCCCTTGGCGTTCATGGCCTTGTTTGGCCGCCCATGCTCATCACTACG
GCCATTGTTTTTGTTTTCGTTTTTATTTTTAATATCATCGGTGAAGCTCT
TGGTGGAGCCAGTTTCAATCCCACTGGTACCGCTGCGTTTTACGCTGTCG
GTGTCGGCTCCGATAGCCTCCTCTCCATGGCCCTCCGCTTCCCAGCCCAG
GCAGCGGGTGCCGTGGGCGGTGCATTGGCCATCATGGAGTACATGCCACC
AAAGTACAAGCACATGCTTGGGGGTCCTTCTTTGCAAGTTGACTTGCATA
CCGGAGCCATTGCTGAGGGGCTGTTGACTTTCCTTATTACCTTTGCTGTT
CTTGTAATTATGCTCAAGGGTCCTCAAAGCAATATTTTGAAGACCTGGTT
GGTTGCTGTGGCAACTGTCGTCTTGATTGTTACAGGTTCCGCTTATACTG
GACCTTCCATGAATCCTGCCAATGCCTTTGGCTGGGCATATGTGAACAAG
TGGCATGACACATGGGATCAGTTTTACGTATACTGGATTTGTCCATTCAT
AGGAGCAGTTGCGGCTTCTATGATTTTCCGTGTTGTCTTCCCCCCACCGG
CACCAGCTCGACCGGCGAAGAAAAAGAAGAAAAACTGAAGGTGGGTTAAT
CTGCTAAGATGTGATATATTCGAGCCCAATGTTCATGCAATAAGAACCTC
TTTTTTTTCCTCTGAGCTCTGGTATTCTGTGAACTTATC
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