CV885543

Overview
NameCV885543
Unique NameCV885543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length921
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: UCKC_DICDI (Uridine-cytidine kinase C OS=Dictyostelium discoideum GN=udkC PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 2.277e-55
Identity = 100/203 (49.26%), Postives = 153/203 (75.37%), Query Frame = 3
Query:  177 QVQLVKKKDSD-RYEIVPIEDTLSFEKGFFIVIRACQLLAQKNHG-IILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSSR-IIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETVFAL 776
            +++++ + D D RY I P++DTLSF+KGFF+ +RA Q + +K+ G +I+VG+AGPSGAGKT   +K+++ +P   +I++DNY DSSR II+ N+DD RL D++ L +NI  L   K   +P+YDF  S R  Y+ ++ P S++++IEGIYAL E++R L+DLRVS++GGVHFDL+KR+FRD+ R GQ+P E + QI++TV+ +
Sbjct:    5 EIEVIPRPDKDDRYTIKPLKDTLSFDKGFFLAVRAIQSIRKKSQGSVIVVGIAGPSGAGKTSIAQKIVSVLPKSILISLDNYLDSSRQIIEENYDDYRLVDFELLKKNISDLISNKPTDLPLYDFTKSGRYAYKRVQPPESKVLLIEGIYALHEEIRHLLDLRVSISGGVHFDLIKRIFRDVHRTGQQPHESLQQITDTVYPM 207          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: UCKD_DICDI (Uridine-cytidine kinase D OS=Dictyostelium discoideum GN=udkD PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.995e-31
Identity = 77/223 (34.53%), Postives = 135/223 (60.54%), Query Frame = 3
Query:  123 DTSSGADSPRRRPGLLRDQVQLVKKKDSDR--YEIVPIEDTLSFEKGFFIVIRACQLLAQKN-HGIILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIRGLKEGKAVQVP-IYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEKLRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQ-EPEEIIHQISETVFAL 776
            D S  +DS   R     +++ ++ + +S    +EI  +   LSF++GFF   RA ++L +K+   II +G+AGP GAGKT    K+ + +  + +I++ ++     + D N+DDP L D+D ++  +  LKE K V +P I + K  SR    ++ + +S+++I+EG YALS ++RPL+D+ V++TGGVH DL+K + R I   G+   ++++ QI+  VF +
Sbjct:   45 DQSIESDSSFTREKQFEEELDILGEINSKTGLFEIKQVPYQLSFDQGFFHACRAIEILTEKDPKRIICLGIAGPVGAGKTTLANKIGSLVNGV-IISLQDFVKLENVKDNNYDDPVLIDFDKVISTLNELKENKTVIIPKIVNRKMESR----SISLSTSKVIILEGAYALSARIRPLLDISVAITGGVHLDLIKSIMRGIVTSGKNSSKDVLAQITNVVFPM 262          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAAW (Uridine kinase OS=Staphylococcus aureus (strain MW2) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAAT (Uridine kinase OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAAS (Uridine kinase OS=Staphylococcus aureus (strain MSSA476) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAAR (Uridine kinase OS=Staphylococcus aureus (strain MRSA252) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAAN (Uridine kinase OS=Staphylococcus aureus (strain N315) GN=udk PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAAM (Uridine kinase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=udk PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAAE (Uridine kinase OS=Staphylococcus aureus (strain Newman) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
BLAST of CV885543 vs. ExPASy Swiss-Prot
Match: URK_STAAC (Uridine kinase OS=Staphylococcus aureus (strain COL) GN=udk PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.858e-19
Identity = 53/160 (33.12%), Postives = 94/160 (58.75%), Query Frame = 3
Query:  315 LVGVAGPSGAGKTVFTEKVLNFMP--SIAVITMDNY-NDSSRI-----IDGNFDDPRLTDYDTLLENIRGLKEGKAVQVPIYDFKSSSRIGYRTLEVPSSRIVIIEGIYALSEK-LRPLIDLRVSVTGGVHFDLVKRVFRDIQRVGQEPEEIIHQISETV 767
            ++G+AG SG+GKT  T +++  +   S+A++  D Y  D   +     ++ N+D P   D D L+EN++ LK GKAV+VP YD+ S +R    T++     ++I+EGI+AL  K LR ++D+++ V       +++R+ RD +  G+  + +I+Q    V
Sbjct:    6 IIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLETNYDHPFAFDNDLLIENLKDLKNGKAVEVPTYDYASHTRSDI-TIDFKPKDVIIVEGIFALENKVLRDMMDVKIYVDTDADLRILRRLTRDTKERGRSMDSVINQYLSVV 164          
The following BLAST results are available for this feature:
BLAST of CV885543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
UCKC_DICDI2.277e-5549.26Uridine-cytidine kinase C OS=Dictyostelium discoid... [more]
UCKD_DICDI2.995e-3134.53Uridine-cytidine kinase D OS=Dictyostelium discoid... [more]
URK_STAAW5.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain MW... [more]
URK_STAAT5.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain US... [more]
URK_STAAS5.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain MS... [more]
URK_STAAR5.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain MR... [more]
URK_STAAN5.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain N3... [more]
URK_STAAM5.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain Mu... [more]
URK_STAAE5.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain Ne... [more]
URK_STAAC5.858e-1933.13Uridine kinase OS=Staphylococcus aureus (strain CO... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_016C09_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_016_T7_C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885543 ID=CV885543; Name=CV885543; organism=Citrus sinensis; type=EST; length=921bp
CCCAAAACCCCAGAAGCCTCTGTTCATCTTGATTCCTAAGAATTCACTGT
TCCAAAAAAAGAAAAAAAAAATCAAAGAAAAGCAAGGGAGGGAATATATA
TTGTGGAACTTATATGGCTCAGGACACTTCTTCAGGTGCTGATTCACCTC
GACGACGACCTGGTCTGTTGCGAGATCAGGTTCAGTTGGTTAAGAAGAAG
GACTCTGATCGCTATGAGATTGTTCCTATAGAAGATACATTGTCATTTGA
AAAAGGTTTTTTCATAGTAATTCGTGCATGCCAATTGTTGGCTCAAAAGA
ATCATGGGATAATATTAGTTGGAGTAGCAGGTCCCTCCGGAGCTGGAAAG
ACTGTCTTCACTGAGAAGGTGCTCAACTTTATGCCCAGTATTGCTGTGAT
AACCATGGACAACTACAACGATTCTAGTCGTATCATTGATGGCAACTTCG
ATGACCCGCGCTTGACAGATTATGACACACTGCTTGAAAACATTCGTGGT
TTAAAGGAAGGGAAAGCTGTTCAAGTCCCAATTTACGACTTCAAGTCTAG
TTCTCGCATTGGTTACAGGACACTTGAAGTCCCTAGCTCCCGCATTGTGA
TTATTGAAGGCATCTATGCCTTAAGTGAAAAACTGCGGCCTTTGATAGAT
CTTCGTGTATCTGTTACGGGTGGAGTTCATTTTGATCTCGTAAAGCGAGT
TTTTCGTGACATTCAACGTGTTGGCCAAGAGCCTGAAGAGATAATCCATC
AAATATCTGAAACGGTTTTTGCACTTATCTCATGATAAGATTGTTTTCTG
TTGGCTTTCTTACTGAGTTTCTTCAGTCATTCGGTTGCCAATTGTAATTG
ATAAAGATTTTCTTTTTTTCCTCTTTTCACTTCCATCCTAATATAGCAGT
TTCAAATATTTCTTTTTTGCA
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