CV885539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885539 vs. ExPASy Swiss-Prot
Match: ARNA_ERWCT (Bifunctional polymyxin resistance protein arnA OS=Erwinia carotovora subsp. atroseptica GN=arnA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.838e-38 Identity = 86/210 (40.95%), Postives = 119/210 (56.67%), Query Frame = -2 Query: 152 EDASSCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY--AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 772 ED S I G I KQRW Y+ +KQL++R+I+A GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG +R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L EM+ + + +DV S +YG+GY D R P + + L W P + + TL Y RT Sbjct: 453 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDGIEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDRFPPFAGFIDVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRT 659
BLAST of CV885539 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP7 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=arnA PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.841e-38 Identity = 81/210 (38.57%), Postives = 127/210 (60.48%), Query Frame = -2 Query: 152 EDASSCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 772 ED+S+ + G I KQRW Y+ +KQL++R+I+A G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+ +R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + + + +V S ++YG+GY D + R P + + L W PK + + +E TL + RT Sbjct: 446 EDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFFLRT 652
BLAST of CV885539 vs. ExPASy Swiss-Prot
Match: ARNA_PECCP (Bifunctional polymyxin resistance protein arnA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.839e-37 Identity = 84/210 (40.00%), Postives = 119/210 (56.67%), Query Frame = -2 Query: 152 EDASSCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY--AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 772 ED S I G I KQRW Y+ +KQL++R+I+A GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG +R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L +M+ + + ++V S +YG+GY D R P + + L W P + + TL Y RT Sbjct: 452 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDGIEALFRIIENRNGQCDGQIINIGNPHNEASIRELGDMLLTSFNAHPLRDRFPPFAGFIEVESSSYYGKGYQDVAHRTPSIRNAKRLLEWEPTVKMEQTVAETLDYFLRT 658
BLAST of CV885539 vs. ExPASy Swiss-Prot
Match: ARNA_SERP5 (Bifunctional polymyxin resistance protein arnA OS=Serratia proteamaculans (strain 568) GN=arnA PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.402e-37 Identity = 85/210 (40.48%), Postives = 120/210 (57.14%), Query Frame = -2 Query: 152 EDASSCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 772 ED S I G I KQRW Y+ +KQL++R+I+A GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG +R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E + + DV S +YG+GY D + R P + + L W P ++ + TL Y RT Sbjct: 446 EDHSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQKRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDRFPPFAGFKDVESSSYYGKGYQDVEHRTPSIKNARRLLDWQPTIAMQQTVADTLDYFLRT 652
BLAST of CV885539 vs. ExPASy Swiss-Prot
Match: ARNA_PROMH (Bifunctional polymyxin resistance protein arnA OS=Proteus mirabilis (strain HI4320) GN=arnA PE=3 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 3.138e-37 Identity = 84/215 (39.07%), Postives = 123/215 (57.21%), Query Frame = -2 Query: 137 EDASSCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAI 772 ED S I G I KQRW Y+ +KQL++R+I+A GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+ +R F I D IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ + + K + G + S +YG+GY D + R P + + L W P +E TL + R E + Sbjct: 446 EDNSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPFNWMGPRLD---NLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDINDGIEALFRIIENRDNKCDGQIINIGNPTNEASIRELAEMLLDCFEKHELRGHFPPFAGFKKIESSSYYGKGYQDVEHRKPSIKNAERLLDWKPTIETRQTVEETLDFFLRGAVEEL 657
BLAST of CV885539 vs. ExPASy Swiss-Prot
Match: ARNA_YERE8 (Bifunctional polymyxin resistance protein arnA OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=arnA PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.098e-37 Identity = 84/208 (40.38%), Postives = 121/208 (58.17%), Query Frame = -2 Query: 164 EDASSCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV----DVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 772 ED+S I G I KQRW Y+ +KQL++R+I+A GA+ L+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG+ +R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + K E P D+ S +YG+GY D + R P + + L W P+ +L + TL + Sbjct: 446 EDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDIHDGIEALFRIIENRDGACDGQIINIGNPTNEASIRELAEMLLRCFEK--HELRHNFPPFAGFKDIESSAYYGKGYQDVEYRTPSIRNARRILDWQPEIALEQTVMETLDF 648
BLAST of CV885539 vs. ExPASy Swiss-Prot
Match: ARNA_ERWT9 (Bifunctional polymyxin resistance protein arnA OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=arnA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 9.129e-37 Identity = 79/206 (38.35%), Postives = 122/206 (59.22%), Query Frame = -2 Query: 164 EDASSCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTY 772 ED+S+ + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+ +R F I D IEA+ L+IEN + +G I N+GNP NE +++QLAE + E + + + +V S +YG+GY D + R P + Q L W P ++ ++ TL + Sbjct: 446 EDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGRQKRCFTDIHDGIEALFLIIENKQKNCDGQIINIGNPENEASIKQLAEQLLESFERHPLRDRFPPFAGFREVESSTYYGKGYQDVEHRKPSIRNAKQLLNWQPTIAMDKTIDDTLDF 648
BLAST of CV885539 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP3 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae (strain 342) GN=arnA PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.656e-36 Identity = 79/210 (37.62%), Postives = 124/210 (59.05%), Query Frame = -2 Query: 152 EDASSCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 772 ED S+ + G I KQRW Y+ +KQL++R+I+A G + L+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+ +R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + + + +V S ++YG+GY D + R P + + L W PK + + +E TL + RT Sbjct: 446 EDTSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKYDLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPENEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKGYQDVEHRKPSIRNAKRCLNWEPKVEMEETVEHTLDFFLRT 652
BLAST of CV885539 vs. ExPASy Swiss-Prot
Match: ARNA_ENT38 (Bifunctional polymyxin resistance protein arnA OS=Enterobacter sp. (strain 638) GN=arnA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.917e-36 Identity = 79/213 (37.09%), Postives = 123/213 (57.75%), Query Frame = -2 Query: 152 VLKEDASSCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENP-ARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRT 781 V ED S+ I G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+ +R F I D IEA+ +IEN + +G I N+GNP NE ++++LAEM+ + K + +V S +YG+GY D + R P + ++ + W P + ++ TL + +T Sbjct: 443 VFDEDHSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGRQKRCFTDISDGIEALFRIIENKNSNCDGQIINIGNPDNEASIKELAEMLLASFEKHPLRNHFPPFAGFREVESSTYYGKGYQDVEHRKPSIRNAHRLISWTPTVEMEKTIDETLDFFLKT 652
BLAST of CV885539 vs. ExPASy Swiss-Prot
Match: ARNA_ECO7I (Bifunctional polymyxin resistance protein arnA OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=arnA PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 5.917e-36 Identity = 82/225 (36.44%), Postives = 126/225 (56.00%), Query Frame = -2 Query: 128 EDASSCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPA-RANGHIFNVGNPHNEVTVRQLAEMMTEVYAK---------VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINQQLGWNPKTSLWDLLESTLTYQHRTYAEAIKQA 772 ED S+ I G + K RW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+ +R F I+D IEA+ +IEN R +G I N+GNP NE ++ +L EM+ + K +G +E S +YG+GY D + R P + + L W PK + + ++ TL + RT KQ+ Sbjct: 446 EDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVE-------SSSYYGKGYQDVEHRKPSIRNARRCLDWEPKIDMQETIDETLDFFLRTVDLTDKQS 660 The following BLAST results are available for this feature:
BLAST of CV885539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 79
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885539 ID=CV885539; Name=CV885539; organism=Citrus sinensis; type=EST; length=830bpback to top |