CV885498

Overview
NameCV885498
Unique NameCV885498
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length955
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885498 vs. ExPASy Swiss-Prot
Match: ETR1_MALDO (Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 SV=1)

HSP 1 Score: 384.03 bits (985), Expect = 6.714e-106
Identity = 187/234 (79.91%), Postives = 208/234 (88.89%), Query Frame = 2
Query:   11 NHFYLRVQVKDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 709
            NHFYLRVQVKDSGSGI+PQDIP LFTKFAQ QA+A RNS GSGLGLAICKRFVNLMEGHIWIESEGLGKGCTA FIVKLG PE SN+S L F PK+   H QTNFPGLKV+VMD+NGVSRSVTKGLL HLGCDV  VS ++E   V+S EH+VVFMDV +PGIDGYE+AV IHEKFT+RHERP++VALTGS D +TK+NCMRVG+DGVILKPVS+DKMRSVLS+LLEHRVLFE+
Sbjct:  507 NHFYLRVQVKDSGSGINPQDIPKLFTKFAQTQALATRNSGGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTATFIVKLGFPERSNESKLPFAPKLQANHVQTNFPGLKVLVMDDNGVSRSVTKGLLAHLGCDVTAVSLIDELLHVISQEHKVVFMDVSMPGIDGYELAVRIHEKFTKRHERPVLVALTGSIDKITKENCMRVGVDGVILKPVSVDKMRSVLSELLEHRVLFEA 740          
BLAST of CV885498 vs. ExPASy Swiss-Prot
Match: ETR1_PRUPE (Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 3.119e-103
Identity = 184/234 (78.63%), Postives = 208/234 (88.89%), Query Frame = 2
Query:   11 NHFYLRVQVKDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 709
            NHFYLRVQVKDSGSGI+PQDIP LFTKFAQ Q++A RNS GSGLGLAICKRFVNLMEGHIWIESEG GKGCTAIFIVKLG  E SN+S L F+ K+   H QTNFPGLKV+VMD+NG   SVTKGLL+HLGCDV TVSS++E   V+S EH+VVFMDVC+PGIDGYE+AV IHEKFT+RHERP++VALTG+ D +TK+NCMRVGMDGVILKPVS+DKMRSVLS+LLEHRVLFE+
Sbjct:  507 NHFYLRVQVKDSGSGINPQDIPKLFTKFAQTQSLATRNSGGSGLGLAICKRFVNLMEGHIWIESEGPGKGCTAIFIVKLGFAERSNESKLPFLTKVQANHVQTNFPGLKVLVMDDNG---SVTKGLLVHLGCDVTTVSSIDEFLHVISQEHKVVFMDVCMPGIDGYELAVRIHEKFTKRHERPVLVALTGNIDKMTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHRVLFEA 737          
BLAST of CV885498 vs. ExPASy Swiss-Prot
Match: ETR1_PASED (Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=2 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 7.190e-100
Identity = 179/233 (76.82%), Postives = 201/233 (86.27%), Query Frame = 2
Query:   11 NHFYLRVQVKDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFE 706
            NHFYLRVQVKDSG GI+PQDIP LF KFAQ Q    RNSSGSGLGLAIC+RFVNLM+GHIW+ESEGLGKGCTAIFIVKLGIPE  N+S   F+ K+ V HGQT FPGLKV++MD+NGVSR VTKGLLLHLGCDV TV S EEC RV S +H+VVFMDV +P  +G+E AV +HEKFT+RHERPL+VALT STD +TK+NCMRVGMDG ILKPVS+DKMRSVLSDLLEH+VLFE
Sbjct:  507 NHFYLRVQVKDSGVGINPQDIPKLFIKFAQTQTTGARNSSGSGLGLAICRRFVNLMDGHIWLESEGLGKGCTAIFIVKLGIPERLNESKPPFMSKVAVDHGQTTFPGLKVLLMDDNGVSRMVTKGLLLHLGCDVTTVGSSEECIRVASQDHRVVFMDVGMP--EGFEAAVRLHEKFTKRHERPLVVALTASTDRMTKENCMRVGMDGAILKPVSVDKMRSVLSDLLEHKVLFE 737          
BLAST of CV885498 vs. ExPASy Swiss-Prot
Match: ETR2_PELHO (Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 4.661e-99
Identity = 173/234 (73.93%), Postives = 204/234 (87.18%), Query Frame = 2
Query:   11 NHFYLRVQVKDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 709
            N FYLRVQVKDSG GI+PQDIP LFTKFAQ Q +A +NS GSGLGLAICKRFVNLMEGHIWI+SEG GKGCTA F+VKLGIPE S++  L  +PK+P  HGQTNF GLKV+++D+NGVSR+VT+GLL HLGCDV TVSS +E  RVVS +++VVFMDVC+P +DG+E+AV IHEKF  RHERPLIVALTG+ D +TKDNC RVGM+GV+LKPVS+DKMR+VLS+LLEHRVLFE+
Sbjct:  507 NQFYLRVQVKDSGLGINPQDIPRLFTKFAQTQPVATKNSGGSGLGLAICKRFVNLMEGHIWIDSEGPGKGCTATFVVKLGIPERSSEPKLLLMPKVPANHGQTNFSGLKVLLLDDNGVSRAVTRGLLAHLGCDVTTVSSSDELLRVVSQDYKVVFMDVCMPEVDGFEIAVRIHEKFMTRHERPLIVALTGNIDQVTKDNCTRVGMEGVVLKPVSIDKMRNVLSNLLEHRVLFEA 740          
BLAST of CV885498 vs. ExPASy Swiss-Prot
Match: ETR1_TOBAC (Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 6.730e-98
Identity = 175/234 (74.79%), Postives = 202/234 (86.32%), Query Frame = 2
Query:   11 NHFYLRVQVKDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 709
            NHFYLRVQVKD+GSGI+PQDIP LF KFAQNQA+A ++S G+GLGLAI KRFVNLMEGHIWIESEGLGKG TAIFIVKLGIP  SN+  L F+P++P  H Q  F GLKV++MD+NG SR VTKGLL+HLGCDV TVSS +EC RV++ EH+VVFMDV +PGID YEVAV IHEKF + H RPLIVALTG+TD +TK+NCMRVGMDGVILKPVS+DKMRSVLS+LLEH V+ +S
Sbjct:  505 NHFYLRVQVKDTGSGINPQDIPKLFCKFAQNQALATKSSGGTGLGLAISKRFVNLMEGHIWIESEGLGKGSTAIFIVKLGIPGRSNEPKLPFMPRLPANHMQMTFQGLKVLIMDDNGFSRMVTKGLLVHLGCDVTTVSSGDECLRVLTQEHKVVFMDVSIPGIDCYEVAVQIHEKFGKHHNRPLIVALTGNTDRVTKENCMRVGMDGVILKPVSVDKMRSVLSELLEHGVILQS 738          
BLAST of CV885498 vs. ExPASy Swiss-Prot
Match: ETR1_SOLLC (Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 354.369 bits (908), Expect = 5.697e-97
Identity = 175/234 (74.79%), Postives = 201/234 (85.90%), Query Frame = 2
Query:   11 NHFYLRVQVKDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPV-HGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 709
            NHFYLRVQ+KD+G GI+PQDIPNLF+KF Q+QA+A  NS G+GLGLAICKRFVNLMEGHIWIESEGLGKG TAIFI+KLGIP  +N+S L F+ K+P  H Q +F GLKV+VMDENGVSR VTKGLL HLGCDV TV S +EC RVV+HEH+VV MDV + GID YEVAV IHE+F +RH RPLIVALTG+TD +TK+NCMRVGMDGVILKPVS+ KMRSVLS+LLEH V+ ES
Sbjct:  521 NHFYLRVQIKDTGIGITPQDIPNLFSKFTQSQALATTNSGGTGLGLAICKRFVNLMEGHIWIESEGLGKGSTAIFIIKLGIPGRANESKLPFVTKLPANHTQMSFQGLKVLVMDENGVSRMVTKGLLTHLGCDVTTVGSRDECLRVVTHEHKVVIMDVSMQGIDCYEVAVVIHERFGKRHGRPLIVALTGNTDRVTKENCMRVGMDGVILKPVSVYKMRSVLSELLEHGVVLES 754          
BLAST of CV885498 vs. ExPASy Swiss-Prot
Match: ETR1_PELHO (Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 3.693e-96
Identity = 168/234 (71.79%), Postives = 203/234 (86.75%), Query Frame = 2
Query:   11 NHFYLRVQVKDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHG-QTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 709
            N FY+RVQVKDSGSGI+PQD+P LFTKFAQ+Q +A +NS GSGLGLAI KRFVNLM+GHIWI+SEG  KGCT  F+VKLGIPE SN+  L  +PK+  +  QT+FPGLKV++MDENG+SR VTKGLL+HLGCDV +VSS EEC R+VS +H+VVFMDV VPG+DG+E+AV IHEKF +RHERPLIVALT + D +TK+NC+RVGM+GVILKPVS+DKMR+VLS LLEHR+LFE+
Sbjct:  507 NQFYMRVQVKDSGSGINPQDMPKLFTKFAQSQPVATKNSGGSGLGLAISKRFVNLMDGHIWIDSEGPSKGCTVTFVVKLGIPEGSNEPKLPLMPKVSANNSQTDFPGLKVLLMDENGISRMVTKGLLMHLGCDVTSVSSSEECLRMVSQDHKVVFMDVRVPGLDGHELAVRIHEKFMKRHERPLIVALTSNADKVTKENCLRVGMEGVILKPVSVDKMRNVLSKLLEHRILFEA 740          
BLAST of CV885498 vs. ExPASy Swiss-Prot
Match: ETR1_CUCSA (Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 1.188e-94
Identity = 168/235 (71.49%), Postives = 200/235 (85.11%), Query Frame = 2
Query:   11 NHFYLRVQVKDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHG-QTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFEST 712
            +HFYLRVQVKD+GSGISPQDIP LFTKFAQ   +  RNS GSGLGLAICKRFVNLMEGHIW+ESEGLGKGCTA FIVKLGI E SN+S L F  K+  +   T+FPGLKV+VMD+NGVSRSVTKGLL+HLGC+V T  S+EE  RVVS EH+VVFMD+C PG+DGYE+A+ I EKF + HERP +V LTG++D +TK++C+R GMDG+ILKPVS+DKMRSVLS+L+E RVLFE++
Sbjct:  507 SHFYLRVQVKDTGSGISPQDIPKLFTKFAQT-TVGPRNSCGSGLGLAICKRFVNLMEGHIWLESEGLGKGCTATFIVKLGIAEQSNESKLPFTSKIHENSIHTSFPGLKVLVMDDNGVSRSVTKGLLVHLGCEVTTAGSIEEFLRVVSQEHKVVFMDICTPGVDGYELAIRIREKFAKCHERPFMVVLTGNSDKVTKESCLRAGMDGLILKPVSIDKMRSVLSELIERRVLFETS 740          
BLAST of CV885498 vs. ExPASy Swiss-Prot
Match: ETR1_BRAOL (Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 PE=2 SV=1)

HSP 1 Score: 345.51 bits (885), Expect = 2.646e-94
Identity = 170/234 (72.65%), Postives = 201/234 (85.90%), Query Frame = 2
Query:   11 NHFYLRVQVKDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMPVHGQ-TNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTRRHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFES 709
            +HFYLRV+VKD G+GI+PQDIP LFTKFAQ Q++A R+S GSGLGLAI KRFVNLMEG+IWIESEG+GKGCTAIF VKL I   SN+S  S IPK+P + Q  NF GLKV+VMDENGVSR VTKGLL+HLGC+V TVSS EEC RVVSHEH+VVFMDVC PG++ Y++A+ IHEKFT+RH+RPL+VALTG+TD  TK+ CM  G+DGV+LKPVSLD MR+VLSD LEHRVL+E+
Sbjct:  504 SHFYLRVKVKDLGAGINPQDIPKLFTKFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNIWIESEGVGKGCTAIFDVKLAI---SNESKQSGIPKVPANPQHVNFAGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEHRVVFMDVCTPGVENYQIALRIHEKFTKRHQRPLLVALTGNTDKSTKEKCMSFGLDGVLLKPVSLDNMRNVLSDRLEHRVLYEA 734          
BLAST of CV885498 vs. ExPASy Swiss-Prot
Match: ETR1_ARATH (Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR1 PE=1 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 3.456e-94
Identity = 169/234 (72.22%), Postives = 203/234 (86.75%), Query Frame = 2
Query:   11 NHFYLRVQVKDSGSGISPQDIPNLFTKFAQNQAIALRNSSGSGLGLAICKRFVNLMEGHIWIESEGLGKGCTAIFIVKLGIPEHSNDSNLSFIPKMP-VHGQTNFPGLKVIVMDENGVSRSVTKGLLLHLGCDVMTVSSVEECFRVVSHEHQVVFMDVCVPGIDGYEVAVHIHEKFTR-RHERPLIVALTGSTDNLTKDNCMRVGMDGVILKPVSLDKMRSVLSDLLEHRVLFE 706
            +HFYLRV+VKDSG+GI+PQDIP +FTKFAQ Q++A R+S GSGLGLAI KRFVNLMEG+IWIES+GLGKGCTAIF VKLGI E SN+S  S IPK+P +   +NF GLKV+VMDENGVSR VTKGLL+HLGC+V TVSS EEC RVVSHEH+VVFMDVC+PG++ Y++A+ IHEKFT+ RH+RPL+VAL+G+TD  TK+ CM  G+DGV+LKPVSLD +R VLSDLLE RVL+E
Sbjct:  503 SHFYLRVKVKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNIWIESDGLGKGCTAIFDVKLGISERSNESKQSGIPKVPAIPRHSNFTGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHEHKVVFMDVCMPGVENYQIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLLEPRVLYE 736          
The following BLAST results are available for this feature:
BLAST of CV885498 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
ETR1_MALDO6.714e-10679.91Ethylene receptor OS=Malus domestica GN=ETR1 PE=2 ... [more]
ETR1_PRUPE3.119e-10378.63Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 S... [more]
ETR1_PASED7.190e-10076.82Ethylene receptor OS=Passiflora edulis GN=ETR1 PE=... [more]
ETR2_PELHO4.661e-9973.93Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR... [more]
ETR1_TOBAC6.730e-9874.79Ethylene receptor OS=Nicotiana tabacum GN=ETR1 PE=... [more]
ETR1_SOLLC5.697e-9774.79Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR... [more]
ETR1_PELHO3.693e-9671.79Ethylene receptor 1 OS=Pelargonium hortorum GN=ETR... [more]
ETR1_CUCSA1.188e-9471.49Ethylene receptor 1 OS=Cucumis sativus GN=ETR1 PE=... [more]
ETR1_BRAOL2.646e-9472.65Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 P... [more]
ETR1_ARATH3.456e-9472.22Ethylene receptor 1 OS=Arabidopsis thaliana GN=ETR... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_016A07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_016_T7_A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885498 ID=CV885498; Name=CV885498; organism=Citrus sinensis; type=EST; length=955bp
TACCGAGTGAAATCATTTTTATTTACGTGTACAGGTCAAAGATTCTGGAT
CTGGTATTAGCCCTCAAGATATTCCAAATTTATTTACAAAATTTGCACAA
AATCAAGCAATTGCACTAAGAAATTCTAGTGGCAGTGGACTTGGCCTGGC
AATTTGTAAGAGGTTTGTGAATCTTATGGAGGGACATATCTGGATTGAAA
GTGAAGGTCTTGGAAAGGGTTGTACTGCCATCTTCATTGTAAAACTTGGG
ATTCCGGAGCACTCAAATGATTCTAACCTCTCCTTTATTCCAAAAATGCC
GGTACACGGACAGACCAATTTTCCAGGGCTTAAAGTAATTGTCATGGATG
AAAATGGTGTTAGCAGGTCAGTGACTAAGGGACTTCTGTTGCACCTGGGA
TGTGATGTAATGACGGTGAGCTCTGTTGAGGAGTGCTTCCGAGTTGTTTC
TCACGAACACCAGGTGGTCTTCATGGACGTTTGCGTGCCTGGAATTGATG
GTTATGAAGTCGCTGTCCATATACATGAAAAATTTACGAGGCGTCATGAA
AGGCCATTAATAGTAGCCCTTACTGGAAGTACTGACAATTTGACCAAGGA
TAATTGCATGAGGGTTGGAATGGATGGAGTTATCCTAAAACCTGTTTCAC
TTGATAAAATGAGGAGTGTTTTGTCAGATCTTTTGGAACACCGGGTTCTC
TTTGAGTCCACGTAAAAACGGAGAATGCTTCTACACCTTTTAAGTGGGGG
GAAAAAATATTTAAGGTAACGTGAGAGCTTTCTCTACAGCATTTGGTTTT
TGGTAGATACCACTTTGTGATAGAGCTTTTCAATAGAGTGGTCCAAATAA
CAAATGTACACAAAGGGCAGGTTTGTTCATTAAACTTGCATTTTTTTGCA
AATTGTTATGAACGCAGTGGCAAAGAAATACTAACAGATTTGTGAAATTT
CTGCC
back to top