CV885486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885486 vs. ExPASy Swiss-Prot
Match: HMGL_SOYBN (HMG1/2-like protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 2.176e-25 Identity = 51/70 (72.86%), Postives = 65/70 (92.86%), Query Frame = -2 Query: 337 AFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEG 546 AFFVFMEEFR+ + K+HP+NK+V+AVGKA G KWK+MS+A+KAPYVAK+EKRKVEYEK+M+ YN++QAEG Sbjct: 50 AFFVFMEEFRKVFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEG 119
BLAST of CV885486 vs. ExPASy Swiss-Prot
Match: HMGL_IPONI (HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 5.925e-23 Identity = 46/70 (65.71%), Postives = 61/70 (87.14%), Query Frame = -2 Query: 337 AFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEG 546 AFFVFME+FR+ YK+ HP NKSVA VGKAGG+KWK ++ A+KAP+++KAEKRK EYEK+++ YN++QA G Sbjct: 42 AFFVFMEDFRKTYKEKHPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG 111
BLAST of CV885486 vs. ExPASy Swiss-Prot
Match: MNB1B_MAIZE (DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.489e-21 Identity = 46/72 (63.89%), Postives = 60/72 (83.33%), Query Frame = -2 Query: 331 AFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQAEGTK 546 AFFVFMEEFR+++K+ +PKNKSVAAVGKA G++WKS+SE+DKAPYVAKA K K+EY K + YN+ ++ K Sbjct: 47 AFFVFMEEFRKEFKEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYNKGESTAAK 118
BLAST of CV885486 vs. ExPASy Swiss-Prot
Match: HMGL_VICFA (HMG1/2-like protein OS=Vicia faba PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 9.460e-21 Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = -2 Query: 349 AFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRR 546 AFFVFM +FREQYKKDHP NKSVAAVGKA GE+WKS+SE +KAPYV +A K+K EYE ++ YN++ Sbjct: 51 AFFVFMADFREQYKKDHPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKK 116
BLAST of CV885486 vs. ExPASy Swiss-Prot
Match: HMGL_WHEAT (HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.132e-20 Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = -2 Query: 343 AFFVFMEEFREQYKKDHPKNKSVAAVGKAGGEKWKSMSEADKAPYVAKAEKRKVEYEKDMKNYNRRQA 546 AFFVFM EFRE++K+ +PKNKSVAAVGKA GE+WKS+SE++KAPYVAKA K K EY K + YN+ ++ Sbjct: 48 AFFVFMGEFREEFKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGES 115 The following BLAST results are available for this feature:
BLAST of CV885486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885486 ID=CV885486; Name=CV885486; organism=Citrus sinensis; type=EST; length=550bpback to top |