CV885481
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885481 vs. ExPASy Swiss-Prot
Match: RL131_ARATH (60S ribosomal protein L13-1 OS=Arabidopsis thaliana GN=RPL13B PE=1 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 1.105e-85 Identity = 150/193 (77.72%), Postives = 166/193 (86.01%), Query Frame = 3 Query: 45 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 623 MKHNNVIPNGHFKKHWQNYVKTWFNQP IFPRPT+GPLRPVVHGQTLKYNMK+R G+GFTLEELKAAGIPKKLAPTIG++VDHRRKNRSLEGLQ+NVQRLKTYK KLV+FPRRARK KAGDS PEELA ATQVQG Y+PI EKPT++LVK+T +MKSFKA+DK+R+ER N+RH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKTKLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAGAR 193
BLAST of CV885481 vs. ExPASy Swiss-Prot
Match: RL132_BRANA (60S ribosomal protein L13-2 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 7.919e-84 Identity = 150/193 (77.72%), Postives = 162/193 (83.94%), Query Frame = 3 Query: 45 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 623 MKHNNVIPNGHFKKHWQNYVKTWFNQP IFPRPTAGPLRPVVHGQTLKYNMK+R G+GFTLEELKAAGIPKKLAPTIG+S+DHRRKNRSLEGLQSNVQRLKTYKAKLV+FPRRARK KAGDS EELA ATQVQG YMPI EK ++LVK+T +MKS AYDK+R+ER N+RH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGISLDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKQAMELVKLTSEMKSVNAYDKIRLERTNKRHAGAR 193
BLAST of CV885481 vs. ExPASy Swiss-Prot
Match: RL131_BRANA (60S ribosomal protein L13-1 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 3.009e-83 Identity = 149/193 (77.20%), Postives = 162/193 (83.94%), Query Frame = 3 Query: 45 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 623 MKHNNVIPNGHFKKHWQNYVKTWFNQP IFPRPTAGPLRPVVHGQTLKYNMK+R G+GFTLEELK+AGIPKKLAPTIG++VDHRRKNRSLEGLQSNVQRLKTYKAKLV+FPRRARK KAGDS EELA ATQVQG YMPI EK +LVK+T +MKS KA+DK+R+ER N+RH GAR Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKSAGIPKKLAPTIGIAVDHRRKNRSLEGLQSNVQRLKTYKAKLVIFPRRARKVKAGDSTAEELANATQVQGDYMPIVREKHATELVKLTTEMKSVKAFDKIRLERTNKRHAGAR 193
BLAST of CV885481 vs. ExPASy Swiss-Prot
Match: RL133_ARATH (60S ribosomal protein L13-3 OS=Arabidopsis thaliana GN=RPL13D PE=2 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 1.951e-82 Identity = 147/193 (76.17%), Postives = 162/193 (83.94%), Query Frame = 3 Query: 45 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 623 MKHNNVIP+ HF+KHWQNYVKTWFNQP IFPRPT+GPLRPVVHGQTLKYNMK+RAG+GFTLEELK AGIPKKLAPTIG+SVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRR+R+ KAGDS PEELA ATQVQG YMPI K ++LVK+T D+K+FKAYDK+R+ER N RH GAR Sbjct: 1 MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKIRLERTNARHAGAR 193
BLAST of CV885481 vs. ExPASy Swiss-Prot
Match: RL132_ARATH (Putative 60S ribosomal protein L13-2 OS=Arabidopsis thaliana GN=RPL13C PE=3 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 5.145e-75 Identity = 138/193 (71.50%), Postives = 153/193 (79.27%), Query Frame = 3 Query: 45 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 623 MKHNNVIPNGHFKK W+NYVKT FNQP IFPRPTAGP+RPVVH QTL YNMK+RAG+GFTLEELKAAGIPKKLAPTIG+SVDH RKNRSLEG Q+NVQRLKTYKAKLV+FPR AR K GDSA +ELA ATQVQ +MPI E PT++LVK+T DMK F AYDK+R+E N+RH G R Sbjct: 1 MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVR 193
BLAST of CV885481 vs. ExPASy Swiss-Prot
Match: RL13_TOBAC (60S ribosomal protein L13 OS=Nicotiana tabacum GN=RPL13 PE=2 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.696e-65 Identity = 123/186 (66.13%), Postives = 140/186 (75.27%), Query Frame = 3 Query: 69 NGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGARL 626 NGHFKKHWQNYVKTWFNQP I PRPTAG LRP+VHGQTLKYNMK+R+GRGF+LEELKAAGIPKKLAPTIG++VDHRR+NRSLEGLQ+NVQRL+ + +LVVFPRRA + + P TATQV G YMPI EK + L KV + MKSF AY KLR+ER NERH GAR+ Sbjct: 5 NGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKISPRPTAGTLRPIVHGQTLKYNMKVRSGRGFSLEELKAAGIPKKLAPTIGIAVDHRRRNRSLEGLQTNVQRLEDLQGQLVVFPRRASRSRLVILPPRNCLTATQVHGAYMPIEREKHQLILSKVLKKMKSFNAYAKLRVERTNERHIGARM 190
BLAST of CV885481 vs. ExPASy Swiss-Prot
Match: RL13_CHLSW (60S ribosomal protein L13 OS=Chlamydomonas sp. (strain W80) GN=RPL13 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 9.124e-56 Identity = 106/193 (54.92%), Postives = 134/193 (69.43%), Query Frame = 3 Query: 45 MKHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 623 ++ N+++PNGHF K WQ +VKTWFNQP FPRP AG L+P+V QT+KYN K R GRGFTLEELK AGIP K APT+G++VDHRRKNRSLE LQ+NVQRLKTY+A LV+FPR +K KA +++ + + A+Q +G +P+ KP ++LVK+T DMK Y KLRIER N R G R Sbjct: 2 VRGNDMLPNGHFHKKWQFHVKTWFNQPARKQRRRNARAEKAKATFPRPVAGSLKPIVRCQTVKYNTKQRLGRGFTLEELKEAGIPAKFAPTVGIAVDHRRKNRSLETLQANVQRLKTYRASLVIFPRNMKKPKAFEASAADCSAASQAKGELLPLKGTKPALELVKITADMKEGSQYGKLRIERVNARLKGMR 194
BLAST of CV885481 vs. ExPASy Swiss-Prot
Match: RL13_DANRE (60S ribosomal protein L13 OS=Danio rerio GN=rpl13 PE=2 SV=3) HSP 1 Score: 203.371 bits (516), Expect = 1.363e-51 Identity = 105/190 (55.26%), Postives = 127/190 (66.84%), Query Frame = 3 Query: 54 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 623 N +I N HF K WQ V+TWFNQP I PRP +GPLRPVV T++Y+ K+RAGRGFTLEELKAAGI KK+A TIG+SVD RR+NRS E LQ+NVQRLK Y+ KL++FPR+A K K GDS EEL ATQ+ GP MPI +++D K+FKA+ LR+ RAN R FG R Sbjct: 6 NGMILNPHFHKDWQKRVRTWFNQPARKIRRRKARQAKARRIAPRPVSGPLRPVVRCPTIRYHTKVRAGRGFTLEELKAAGINKKVARTIGISVDSRRRNRSTESLQANVQRLKEYRTKLIIFPRKAAKPKKGDSTEEELKMATQLTGPVMPIKKVHKKEKARVISEDEKNFKAFASLRMARANARLFGIR 195
BLAST of CV885481 vs. ExPASy Swiss-Prot
Match: RL13_DROME (60S ribosomal protein L13 OS=Drosophila melanogaster GN=RpL13 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 7.481e-50 Identity = 100/193 (51.81%), Postives = 129/193 (66.84%), Query Frame = 3 Query: 48 KHNNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKP-TVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 623 K NN+IPN H+ K WQ +VKTWFNQP +FPRP +G LRPVV T++Y+ KLRAGRGFTLEELK AGI A TIG++VD RRKN+SLE Q N+QRLK Y++KL++FP +K +AG+S+ EE ATQ++GP +PI E+P V+ +VT+D K FKA+ LR R + R G R Sbjct: 3 KGNNMIPNQHYHKWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVRCPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEYRSKLILFPINEKKIRAGESSLEECKLATQLKGPVLPIKNEQPAVVEFREVTKDEKKFKAFATLRKARTDARLVGIR 195
BLAST of CV885481 vs. ExPASy Swiss-Prot
Match: RL13_ICTPU (60S ribosomal protein L13 OS=Ictalurus punctatus GN=rpl13 PE=2 SV=3) HSP 1 Score: 194.512 bits (493), Expect = 6.333e-49 Identity = 99/190 (52.11%), Postives = 123/190 (64.74%), Query Frame = 3 Query: 54 NNVIPNGHFKKHWQNYVKTWFNQPXXXXXXXXXXXXXXXXIFPRPTAGPLRPVVHGQTLKYNMKLRAGRGFTLEELKAAGIPKKLAPTIGVSVDHRRKNRSLEGLQSNVQRLKTYKAKLVVFPRRARKFKAGDSAPEELATATQVQGPYMPITLEKPTVDLVKVTQDMKSFKAYDKLRIERANERHFGAR 623 N +I N HF K WQ V+TWFNQP I PRP AGPLRP+V T++YN K+RAGRGFTLEELKAAGI K++A TIG++VD RR+NRS E L NVQRLK Y++KL++FPR+ K GDS EE+ ATQ+ GP MPI + +T++ K F A+ LR+ RAN R FG R Sbjct: 6 NGMILNPHFHKDWQKRVRTWFNQPARKLRRRKARQAKARRIAPRPVAGPLRPIVRCPTVRYNTKVRAGRGFTLEELKAAGINKRVARTIGIAVDPRRRNRSTESLHVNVQRLKVYRSKLILFPRKVSAPKKGDSTEEEVKMATQLTGPVMPIKIVHKKEKARMITEEEKKFNAFANLRMARANARLFGIR 195 The following BLAST results are available for this feature:
BLAST of CV885481 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885481 ID=CV885481; Name=CV885481; organism=Citrus sinensis; type=EST; length=855bpback to top |