CV885318

Overview
NameCV885318
Unique NameCV885318
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CV885318 vs. ExPASy Swiss-Prot
Match: UMP2_ARATH (Uncharacterized protein At2g27730, mitochondrial OS=Arabidopsis thaliana GN=At2g27730 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.387e-26
Identity = 66/115 (57.39%), Postives = 87/115 (75.65%), Query Frame = -2 
Query:  344 MASRIAVRNFSRRFSSSGKVLSEEEKAAENVYIKKVEQEKLEKMARKGPKPEETPTASSGSGAEAKPTSATGASTEKVSTDQYRNYAVIAGIITGVSALGWYLKSSGKKE-QVQD 685
            MA+R A+R  SRRFSS GKVLSEEE+AAENV+IKK+EQEKL+K+AR+GP  +   +AS    A A   SA+  S  KVS D+ RNYAV+AG++  V ++GWYLK+ GKK+ +VQ+
Sbjct:    1 MATRNALRIVSRRFSS-GKVLSEEERAAENVFIKKMEQEKLQKLARQGPGEQAAGSASEAKVAGA-TASASAESGPKVSEDKNRNYAVVAGVVAIVGSIGWYLKAGGKKQPEVQE 113
The following BLAST results are available for this feature:
BLAST of CV885318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UMP2_ARATH8.387e-2657.39Uncharacterized protein At2g27730, mitochondrial O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_2_015A03_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_015_T7_A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885318 ID=CV885318; Name=CV885318; organism=Citrus sinensis; type=EST; length=770bp
TTTTTTTTTTTTTTTTTGGTTGGAATAATTTTATTAACTGGTTTTTCCTG
AAGATTTTCATCCATTCACCAGCAAAGGCATTTTTTTATCTAGGTAAATA
ATAAGCGTACTGAAATAAGAGAATTTTTACTAACAAAAGGTTTATCTGGT
AACACCAAAGACAGACTTTGGAATTCAACCAGTGTCTGGTGAAACAAAAG
AGAAATAATACCAACAAAACGGGGTCAATAATAATCCAAGTTCTGTTTAT
TTCAAAGCAATGTATGAACTCAGTAGTGAGCAGTTGTCGTAAATAGAATG
TCGTCCATGGCCCTCATTATCTATATCTAGCATATTGACTTCAGTCCTGG
ACTTGTTCTTTCTTCCCGCTTGATTTGAGATACCATCCGAGAGCACTAAC
ACCAGTTATGATACCAGCTATGACTGCATAGTTACGGTACTGGTCAGTTG
ATACTTTCTCAGTTGAAGCTCCCGTGGCTGAAGTAGGTTTGGCTTCAGCT
CCTGACCCTGAGCTAGCAGTAGGTGTCTCTTCCGGTTTGGGTCCCTTGCG
TGCCATCTTCTCCAATTTCTCTTGCTCAACTTTTTTTATGTAGACATTCT
CAGCTGCTTTTTCCTCCTCGCTCAGTACTTTGCCACTGCTTGAGAACCTT
CGAGAAAAATTTCTTACAGCAATCCTTGAAGCCATGATGGTGGTCATAAA
ACCCTTTTGGATACACGGAGGAAGCTTTTCGGCTTTGTGTGTTGGAGAAA
TGAAATGGGGAGGTTTGCCT
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