CV885282

Overview
NameCV885282
Unique NameCV885282
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length845
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13265 contig Csv1_Contig13265:44..889. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GAPN_NICPL (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Nicotiana plumbaginifolia GN=GAPN PE=2 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 3.833e-107
Identity = 189/211 (89.57%), Postives = 198/211 (93.84%), Query Frame = -1
Query:  213 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLPSPSYTMG 845
            I+KGGFSYSGQRCTAVKVVLVMESVAD+L         KLTVGPPE+ CDITPVVSESSANFIEGLVMDAKQK ATFCQ+Y+REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI SVEEGIHHCNASNFGLQGCVFTKDINKA+LISDAMETGTVQINSAPARGPDHFPFQG KDSGIGSQG+TNSINMMTKVK+TVINLP+PSYTMG
Sbjct:  286 IVKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKQKNATFCQQYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPTPSYTMG 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GAPN_PEA (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Pisum sativum GN=GAPN PE=1 SV=1)

HSP 1 Score: 381.333 bits (978), Expect = 3.588e-105
Identity = 187/211 (88.63%), Postives = 197/211 (93.36%), Query Frame = -1
Query:  213 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLPSPSYTMG 845
            IIKGGFSYSGQRCTAVKVVLVMESVAD+L         KL+VGPPE+  DITPVVSESSANFIEGLV DAK+KGATFCQEY+REGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRI SVEEGIHHCNASNFGLQGCVFTKDINKA++ISDAME+GTVQINSAPARGPDHFPFQG KDSGIGSQG+TNSINMMTKVK+TVINLPSPSYTMG
Sbjct:  286 IIKGGFSYSGQRCTAVKVVLVMESVADALVEKVKVKVAKLSVGPPEDDSDITPVVSESSANFIEGLVNDAKEKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTKDINKAIMISDAMESGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPSPSYTMG 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GAPN_APIGR (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Apium graveolens PE=1 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 2.326e-104
Identity = 180/211 (85.31%), Postives = 197/211 (93.36%), Query Frame = -1
Query:  213 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLPSPSYTMG 845
            +IKGGFSYSGQRCTA+KV+LVM+SVAD+L         KLTVGPPE++ DITPVVSESSANFIEGLV DAK+KGATFCQEY+REGNLIWPLLLDNV+PDMRIAWEEPFGP+LPVIRI S EEGIHHCNASNFGLQGCVFT+DINKAMLISDAME+GT+QINSAPARGPDHFPFQG KDSGIGSQG+TNSINMMTK+K+TVINLPSPSYTMG
Sbjct:  286 VIKGGFSYSGQRCTAIKVILVMQSVADTLVEKVNAKVAKLTVGPPEDNSDITPVVSESSANFIEGLVKDAKEKGATFCQEYKREGNLIWPLLLDNVKPDMRIAWEEPFGPILPVIRINSAEEGIHHCNASNFGLQGCVFTRDINKAMLISDAMESGTIQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKIKTTVINLPSPSYTMG 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GAPN_WHEAT (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Triticum aestivum GN=GAPN PE=1 SV=2)

HSP 1 Score: 378.252 bits (970), Expect = 3.037e-104
Identity = 183/211 (86.73%), Postives = 197/211 (93.36%), Query Frame = -1
Query:  213 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLPSPSYTMG 845
            I+KGGFSYSGQRCTAVKVVL+ME+VAD++         KL VGPPE+  DITPVV+ESSANFIEGLVMDAK+KGATFCQEYRREGNLIWPLLLD+VRPDMRIAWEEPFGPVLPVIRI SVEEGIHHCNASNFGLQGCVFT+DINKA++ISDAME+GTVQINSAPARGPDHFPFQG KDSGIGSQG+TNSINMMTKVKSTVINLPSPSYTMG
Sbjct:  286 IVKGGFSYSGQRCTAVKVVLIMEAVADTVVEKVNAKLAKLKVGPPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAIMISDAMESGTVQINSAPARGPDHFPFQGLKDSGIGSQGITNSINMMTKVKSTVINLPSPSYTMG 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GAPN_MAIZE (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Zea mays GN=GPN1 PE=2 SV=1)

HSP 1 Score: 377.867 bits (969), Expect = 3.967e-104
Identity = 183/211 (86.73%), Postives = 196/211 (92.89%), Query Frame = -1
Query:  213 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLPSPSYTMG 845
            I+KGGFSYSGQRCTAVKVVL+MES+AD++         KL VGPPE+  DITPVV+ESSANFIEGLVMDAK+KGATFCQEYRREGNLIWPLLLD+VRPDMRIAWEEPFGPVLPVIRI SVEEGIHHCNASNFGLQGC+FT+DINKA+LISDAMETGTVQINSAPARGPDHF FQG KDSGIGSQG+TNSINMMTKVKSTVINLPSPSYTMG
Sbjct:  288 IVKGGFSYSGQRCTAVKVVLIMESIADAVVQKVNAKLAKLKVGPPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCIFTRDINKAILISDAMETGTVQINSAPARGPDHFSFQGLKDSGIGSQGITNSINMMTKVKSTVINLPSPSYTMG 498          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GAPN_ARATH (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Arabidopsis thaliana GN=ALDH11A3 PE=1 SV=2)

HSP 1 Score: 377.867 bits (969), Expect = 3.967e-104
Identity = 186/211 (88.15%), Postives = 197/211 (93.36%), Query Frame = -1
Query:  213 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINLPSPSYTMG 845
            IIKGGFSYSGQRCTAVKVVLVMESVAD L         KLTVGPPEE+ DIT VVSESSANFIEGLVMDAK+KGATFCQEY+REGNLIWPLLLDNVRPDMRIAWEEPFGPV+PV+RI SVEEGI+HCNASNFGLQGCVFTKDINKA+LISDAMETGTVQINSAPARGPDHFPFQG KDSGIGSQGVTNSIN+MTKVK+TVINLP+PSY+MG
Sbjct:  286 IIKGGFSYSGQRCTAVKVVLVMESVADELVEKVKAKVAKLTVGPPEENSDITAVVSESSANFIEGLVMDAKEKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVVPVLRINSVEEGINHCNASNFGLQGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGLKDSGIGSQGVTNSINLMTKVKTTVINLPTPSYSMG 496          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GAPN_STRMU (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus mutans GN=gapN PE=1 SV=2)

HSP 1 Score: 222.631 bits (566), Expect = 2.133e-57
Identity = 113/203 (55.67%), Postives = 136/203 (67.00%), Query Frame = -1
Query:  237 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 845
            II G F YSGQRCTAVK VLVMESVAD L          LT+G PE+  DITP++   SA+++EGL+ DA  KGA    E +REGNLI P+L D V  DMR+AWEEPFGPVLP+IR+ SVEE I   N S +GLQ  +FT D  +A  I++ +E GTV IN+   RG D+FPF G K SG G QGV  SI  MT VKS V ++
Sbjct:  272 IIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGAAALTEIKREGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVVFDI 474          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GAPN_STREI (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase OS=Streptococcus equinus GN=gapN PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.358e-56
Identity = 110/203 (54.19%), Postives = 139/203 (68.47%), Query Frame = -1
Query:  237 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVINL 845
            I+ G + YSGQRCTAVK VLVM+S+AD L          LTVG PE++ DITP++   +A+++EGL+ DA++KGA     ++REGNLI P+L DNV  DMR+AWEEPFGPVLP IR+ SVEE I   N S +GLQ  VFT +   A  I++ +E GTV IN+   RG D+FPF G K SG G QGV  SI  MT VKSTV ++
Sbjct:  272 IVAGAYGYSGQRCTAVKRVLVMDSIADKLVEKVSALVNNLTVGMPEDNADITPLIDTKAADYVEGLIKDAQEKGAKEVISFKREGNLISPVLFDNVTTDMRLAWEEPFGPVLPFIRVNSVEEAIEISNKSEYGLQASVFTNNFPLAFKIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGVQGVKYSIEAMTTVKSTVFDI 474          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: GAPN_SCEVA (NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Scenedesmus vacuolatus GN=GapN PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.452e-38
Identity = 78/110 (70.91%), Postives = 88/110 (80.00%), Query Frame = -1
Query:  516 IIKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPPEESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGP 845
            IIKGGFSYSGQRCTAVKVVLVM+ +AD L         KL VG PE++ DIT VVSE SANFI+GLV DAK KGATF  +++REGNL+WP+LLDNV  DMRIAWEEPFGP
Sbjct:  124 IIKGGFSYSGQRCTAVKVVLVMQDIADELVRKVHAGVQKLKVGRPEDNADITAVVSEGSANFIQGLVEDAKAKGATFLTDWKREGNLLWPVLLDNVTADMRIAWEEPFGP 233          
BLAST of CV885282 vs. ExPASy Swiss-Prot
Match: LADH_METM7 (Lactaldehyde dehydrogenase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0731 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.791e-30
Identity = 74/202 (36.63%), Postives = 116/202 (57.43%), Query Frame = -1
Query:  240 IKGGFSYSGQRCTAVKVVLVMESVADSLXXXXXXXXXKLTVGPP-EESCDITPVVSESSANFIEGLVMDAKQKGATFCQEYRREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRIGSVEEGIHHCNASNFGLQGCVFTKDINKAMLISDAMETGTVQINSAPARGPDHFPFQGFKDSGIGSQGVTNSINMMTKVKSTVIN 842
            +K  F  +GQ C +V  VLV E V ++           L +G P +   DI P++S  SA  IE L+ ++  +G        R+ +LI+P ++ N+  D  ++  E FGPVLP++++ + EE +   N S +GLQ  VFT DINKAM I+D++E G + INS+P    D+ PF G K SG+G +G+  ++  M + K+ VI+
Sbjct:  263 VKSKFLNAGQVCISVGQVLVEEEVLETFTKYIIDETKNLVLGNPLDTKTDIGPLISPESALRIENLIKESVNEGGELLIGGNRQNSLIFPAVI-NIDEDNLLSKIETFGPVLPILKVKNSEEAVSIANNSKYGLQAGVFTNDINKAMKIADSLEYGGIMINSSPTFRKDNMPFGGVKKSGLGREGIKYTVEEMCETKTVVIH 463          
The following BLAST results are available for this feature:
BLAST of CV885282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 339
Match NameE-valueIdentityDescription
GAPN_NICPL3.833e-10789.57NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_PEA3.588e-10588.63NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_APIGR2.326e-10485.31NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_WHEAT3.037e-10486.73NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_MAIZE3.967e-10486.73NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_ARATH3.967e-10488.15NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_STRMU2.133e-5755.67NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_STREI2.358e-5654.19NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
GAPN_SCEVA6.452e-3870.91NADP-dependent glyceraldehyde-3-phosphate dehydrog... [more]
LADH_METM73.791e-3036.63Lactaldehyde dehydrogenase OS=Methanococcus maripa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013G05_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885282 ID=CV885282; Name=CV885282; organism=Citrus sinensis; type=EST; length=845bp
GAAACTATTGCGTTCTGTCTCACATATTACATATATGTTGATGCACATAT
CTCCATTATTTATCATCTGCAAAGCGTGAAGTACTAGAAAGGCAGATACA
TAATACAATTCTGCAGATAAAACTCGTCCCTCTTCATCGCTAGTTATTAT
ACCTAAACTAAAATACCGTTCGTTCTTAACTGTTTCCTAATGGCTTAATT
ATACTTGAATTAACCCATGGTATAAGAAGGACTTGGCAAATTGATAACAG
TGCTTTTGACCTTAGTCATCATGTTGATGCTGTTGGTAACACCTTGTGAG
CCAATTCCACTGTCCTTAAAACCCTGGAAAGGAAAATGATCTGGTCCACG
AGCTGGGGCAGAGTTGATCTGGACGGTTCCTGTCTCCATTGCATCGCTGA
TCAACATTGCTTTGTTAATGTCCTTTGTAAATACACAGCCCTGAAGTCCA
AAGTTGCTAGCATTGCAGTGGTGAATACCTTCCTCAACAGAGCCAATCCT
GATAACAGGCAGAACCGGTCCGAATGGCTCCTCCCATGCGATCCTCATAT
CGGGCCTAACATTGTCAAGCAACAAGGGCCAGATGAGGTTGCCTTCTCTC
CTGTACTCTTGACAGAATGTTGCTCCTTTCTGTTTGGCATCCATAACCAG
CCCTTCAATGAAATTTGCAGATGATTCCGACACAACTGGAGTGATATCAC
AGCTTTCTTCAGGAGGGCCAACTGTCAGTTTCACCACTTTAGCCTTAACC
TTCTCGACCAGGGAATCTGCTACAGATTCCATCACCAAGACAACCTTAAC
TGCAGTGCATCTTTGACCACTGTAAGAAAATCCTCCTTTTATTAT
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