CV885273
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV885273 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.188e-87 Identity = 154/215 (71.63%), Postives = 181/215 (84.19%), Query Frame = 3 Query: 213 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAXALRGEPLTVQKPGTQTRSFCYVS 857 RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI AL+GEPLTV G+QTR+F YVS Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS 303
BLAST of CV885273 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.188e-87 Identity = 154/215 (71.63%), Postives = 181/215 (84.19%), Query Frame = 3 Query: 213 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAXALRGEPLTVQKPGTQTRSFCYVS 857 RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI AL+GEPLTV G+QTR+F YVS Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS 303
BLAST of CV885273 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.188e-87 Identity = 154/215 (71.63%), Postives = 181/215 (84.19%), Query Frame = 3 Query: 213 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAXALRGEPLTVQKPGTQTRSFCYVS 857 RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI AL+GEPLTV G+QTR+F YVS Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS 303
BLAST of CV885273 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.188e-87 Identity = 154/215 (71.63%), Postives = 181/215 (84.19%), Query Frame = 3 Query: 213 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAXALRGEPLTVQKPGTQTRSFCYVS 857 RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI AL+GEPLTV G+QTR+F YVS Sbjct: 90 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS 303
BLAST of CV885273 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 1.715e-86 Identity = 153/215 (71.16%), Postives = 179/215 (83.26%), Query Frame = 3 Query: 213 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAXALRGEPLTVQKPGTQTRSFCYVS 857 RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+GPRM+++DGRVVSNFI AL+GE LTV G QTR+F YVS Sbjct: 91 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRAFQYVS 304
BLAST of CV885273 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2) HSP 1 Score: 316.62 bits (810), Expect = 1.112e-85 Identity = 152/215 (70.70%), Postives = 179/215 (83.26%), Query Frame = 3 Query: 213 RILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAXALRGEPLTVQKPGTQTRSFCYVS 857 RIL+TGGAGF+GSHL DKLM + +EV V DN+FTG K N++ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP +HPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+++R+ARIFNT+G RM+++DGRVVSNFI AL+GE LTV G+QTR+F YVS Sbjct: 88 RILITGGAGFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRAFQYVS 301
BLAST of CV885273 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.431e-24 Identity = 80/222 (36.04%), Postives = 116/222 (52.25%), Query Frame = 3 Query: 216 ILVTGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMN-IDDGRVVSNFIAXALRGEPLTVQKPGTQTRSFCYV 854 ILVTGGAGFIGSH+VDKL+EN +VI+ DN TG+K+N+ +P+ E + D+ + L E V+ + H A + NPV NV+GT+N+L + ++ + + +S VYG+P P E + PI S Y K V E + Y+R +GI+ I R N YG R + + V+S FI L+ + + G QTR F YV Sbjct: 2 ILVTGGAGFIGSHIVDKLIEN-NYDVIILDNLTTGNKNNI-----NPKAEFVNADIRDKDLDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTRDFVYV 212
BLAST of CV885273 vs. ExPASy Swiss-Prot
Match: STRE_STRGR (dTDP-glucose 4,6-dehydratase OS=Streptomyces griseus GN=strE PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.596e-18 Identity = 70/222 (31.53%), Postives = 103/222 (46.40%), Query Frame = 3 Query: 216 ILVTGGAGFIGSHLVDKLME--NEKNEVIVADNYFT--GSKDNLKKWIGHPRFELIRHDVTEP----LLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAXALRGEPLTVQKPGTQTRSFCYV 854 +LVTG AGFIGS V L+ + V+ A + T G+ DNL GHPR+ R D+ + ++ DQ+ HLA + + ++TNV GT +L A R G A + ST EVYG L H W P+ S Y K + L +H HG+ +R+ R N YGPR + +++ FI + G + + G R + +V Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDICDAPGRRVMAGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQVSTDEVYGS-LEHGS----WTEDEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQFPE--KLIPRFITLLMDGHRVPLYGDGLNVREWLHV 219
BLAST of CV885273 vs. ExPASy Swiss-Prot
Match: ACBB_ACTS5 (dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain 50/110) GN=acbB PE=3 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 9.921e-18 Identity = 72/230 (31.30%), Postives = 105/230 (45.65%), Query Frame = 3 Query: 210 MRILVTGGAGFIGSHLVDKLMENE------KNEVIVADNY-FTGSKDNLKKWIGHPRFELIRHDVTEPLLIEV-----DQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAXALRGEPLTVQKPGTQTRSFCYVS 857 M+ILVTGGAGFIGSH V L+ + +V V D + G+ NL + PRF +R D+ + LIE D + H A + +N++GT +L A R +G R L ST EVYG W +P+ S Y K ++ L YH+ HG+ + + R N YGPR + +++ F+ L G + V G R + +VS Sbjct: 1 MKILVTGGAGFIGSHFVTSLISGDIATPQPVTQVTVVDKLGYGGNLRNLAEASADPRFSFVRGDICDEGLIEGLMARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDAALRHHIG-RFLHVSTDEVYGSI-----DTGSWAEGHPLAPNSPYAASKAGSDLLALAYHQTHGMDVVVTRCSNNYGPRQFPE--KMIPLFVTRLLDGLDVPVYGDGRNIRDWLHVS 222
BLAST of CV885273 vs. ExPASy Swiss-Prot
Match: YTCB_BACSU (Uncharacterized UDP-glucose epimerase ytcB OS=Bacillus subtilis GN=ytcB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.296e-17 Identity = 76/227 (33.48%), Postives = 104/227 (45.81%), Query Frame = 3 Query: 210 MRILVTGGAGFIGSHLVDKLMENEKNEVIVADNY-----FTGSKDNLKKWIGHPRFELIRHDV----TEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIQIRIARIFNTYGPRMNIDDGRVVSNFIAXALRGEPLTVQKPGTQTRSFCYVS 857 M+ILVTG AGFIGSHL ++L++++K+ VI D++ F+ NLK + RF I+ ++ LL VD I+HLA N + I L L A R + + STS VYG+ T ++P GV K E L Y + GI I I R F YGPR D I L+ +PLT+ G Q+R F Y+S Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIKENLLTADLASLLEGVDVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEACREHSIQTFVFASTSSVYGEKQGKVSENTSLSPLSPYGVT------KLTGEKLCHVYKQSFGIPIVILRFFTVYGPRQRPD--MAFHRLIKQHLQQKPLTIFGDGQQSRDFTYIS 219 The following BLAST results are available for this feature:
BLAST of CV885273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CV885273 ID=CV885273; Name=CV885273; organism=Citrus sinensis; type=EST; length=857bpback to top |