CV885176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYM_PEA (Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 7.005e-89 Identity = 156/218 (71.56%), Postives = 181/218 (83.03%), Query Frame = 3 Query: 261 DPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 DPE+ +II EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID ETLCQKRAL AF LD KWGVNVQPLSGSP+NF+VYTA+LKPHDRIM LDLPHGGHLSHG+ T +++S SI+FE+MPYRLDESTG +DYD LEK+A LFRPKLI+AGASAY R +DY R+R++ D A+L+ DMAHISGLVAA V+ PF Y Sbjct: 60 DPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDY 277
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 326.635 bits (836), Expect = 1.195e-88 Identity = 155/222 (69.82%), Postives = 183/222 (82.43%), Query Frame = 3 Query: 249 LGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 L E DPE+ +II EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID ETLCQKRAL AF LD KWGVNVQPLSGSPANF VYTA+LKPH+RIM LDLPHGGHLSHG+ T +++S SI+FE+MPYRLDESTG +DYD +EK+A LFRPKLI+AGASAY R +DY R+R++ + A+++ DMAHISGLVAA+V+ PF Y Sbjct: 55 LEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDY 276
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYM_SOLTU (Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 2.662e-88 Identity = 155/218 (71.10%), Postives = 181/218 (83.03%), Query Frame = 3 Query: 261 DPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 DPE+ +II EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID ETLCQKRAL AF LD KWGVNVQPLSGSPANF+VYTA+LKPH+RIM LDLPHGGHLSHG+ T +++S SI+FE+MPYRLDESTG +DYD LEK+A LFRPKLI+AGASAY R +DY R+R++ + A+L+ DMAHISGLVAA V+ PF Y Sbjct: 60 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCNKQKAILLADMAHISGLVAAGVIPSPFDY 277
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 3.477e-88 Identity = 158/230 (68.70%), Postives = 189/230 (82.17%), Query Frame = 3 Query: 225 GSSFVDYSLGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 GS + L E D E+ E++ +EK+RQFK LELIASENFTSRAVMEA+GS TNKY+EG PG RYYGG E +DELETLCQKRAL AF LDE+KWGVNVQP SGSPANF VYTA+L+PHDRIMGLDLP GGHL+HG+ T K+++S +SI+FESMPY++ + GL+DY LE+ A+LF+PKLII+GASAYPR++DY RMR IAD VGA LM DMAH SGLVAA ++ PF Y Sbjct: 2 GSVSGNTPLKEVDNEIFELMNREKDRQFKGLELIASENFTSRAVMEALGSHFTNKYAEGYPGSRYYGGTEVVDELETLCQKRALKAFRLDESKWGVNVQPYSGSPANFAVYTALLRPHDRIMGLDLPSGGHLTHGYQTDKKKISASSIFFESMPYQIG-ADGLIDYQRLEENALLFKPKLIISGASAYPREWDYKRMRAIADKVGAYLMCDMAHYSGLVAAQLLDSPFDY 230
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYN_FLAPR (Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 323.168 bits (827), Expect = 1.321e-87 Identity = 155/218 (71.10%), Postives = 179/218 (82.11%), Query Frame = 3 Query: 261 DPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 DPE+ +II EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID ETLCQKRAL AF LD KWGVNVQPLSGSPANF VYTA+LK HDRIM LDLPHGGHLSHG+ T +++S SI+FE+MPYRL+ESTG +DYD LEK+A LFRPKLI+AGASAY R +DY R+R++ D A+L+ DMAHISGLVAA V+ PF Y Sbjct: 60 DPEIADIIELEKARQWKGLELILSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDAAKWGVNVQPLSGSPANFHVYTALLKAHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAILLADMAHISGLVAAGVIPSPFDY 277
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYM_FLAPR (Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei PE=2 SV=1) HSP 1 Score: 322.398 bits (825), Expect = 2.254e-87 Identity = 154/218 (70.64%), Postives = 179/218 (82.11%), Query Frame = 3 Query: 261 DPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 DPE+ +II EK RQ+K LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID ETLCQKRAL AF LD KWGVNVQPLSGSPANF VYTA+LK HDRIM LDLPHGGHLSHG+ T +++S SI+FE+MPYRL+ESTG +DYD LEK+A LFRPKLI+AGASAY R +DY R+R++ D A+++ DMAHISGLVAA V+ PF Y Sbjct: 60 DPEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKAHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKVCDKQKAIMLADMAHISGLVAAGVIPSPFDY 277
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 6.137e-85 Identity = 148/223 (66.37%), Postives = 182/223 (81.61%), Query Frame = 3 Query: 246 SLGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 S+ E+DPE+ +++ KEK+RQF LELIASENFTSRAVME++GSC TNKY+EGLPG RYYGGNE +D+LE LC KRAL FNL+ +WGVNVQP SGS ANF +T +LKPHDRIMGLDLP GGHL+HG+ T K+++S TSI+FESMPY+++E TG VDY+ +E A LFRPKL+IAGASAYPR++DY RMR+IAD GA L+ DMAHISG+VA PF + Sbjct: 33 SVSESDPEIYDLMMKEKQRQFTGLELIASENFTSRAVMESIGSCFTNKYAEGLPGARYYGGNEVVDQLENLCIKRALETFNLNPEEWGVNVQPYSGSTANFAAFTGLLKPHDRIMGLDLPSGGHLTHGYQTDKKKISATSIFFESMPYQVNE-TGYVDYNKMEANAALFRPKLLIAGASAYPREWDYERMRKIADKHGAYLLCDMAHISGMVAGKQAISPFLF 254
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYM_HUMAN (Serine hydroxymethyltransferase, mitochondrial OS=Homo sapiens GN=SHMT2 PE=1 SV=3) HSP 1 Score: 313.153 bits (801), Expect = 1.367e-84 Identity = 149/223 (66.82%), Postives = 182/223 (81.61%), Query Frame = 3 Query: 246 SLGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 SL ++DPE+ E++ +EK+RQ + LELIASENF SRA +EA+GSCL NKYSEG PGKRYYGG E +DE+E LCQ+RAL AF+LD +WGVNVQP SGSPAN VYTA+L+PHDRIMGLDLP GGHL+HG+M+ +R+S TSI+FESMPY+L+ TGL+DY+ L TA LFRP+LIIAG SAY R DY RMR++ D V A L+ DMAHISGLVAA V+ PFK+ Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH 270
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYM_BOVIN (Serine hydroxymethyltransferase, mitochondrial OS=Bos taurus GN=SHMT2 PE=2 SV=1) HSP 1 Score: 312.383 bits (799), Expect = 2.332e-84 Identity = 148/223 (66.37%), Postives = 181/223 (81.17%), Query Frame = 3 Query: 246 SLGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 SL ++DPE+ E++ +EK+RQ + LELIASENF SRA +EA+GSCL NKYSEG PGKRYYGG E +DE+E LCQ+RAL AF+LD +WGVNVQP SGSPAN YTA+L+PHDRIMGLDLP GGHL+HG+M+ +R+S TSI+FESMPY+L+ TGL+DYD L TA LF+P+LIIAG SAY R DY RMR++ D V A L+ DMAHISGLVAA V+ PFK+ Sbjct: 48 SLSDSDPEMWELLRREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFKPRLIIAGTSAYARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKH 270
BLAST of CV885176 vs. ExPASy Swiss-Prot
Match: GLYD_SCHPO (Probable serine hydroxymethyltransferase, cytosolic OS=Schizosaccharomyces pombe GN=SPAC24C9.12c PE=2 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 3.978e-84 Identity = 150/222 (67.57%), Postives = 181/222 (81.53%), Query Frame = 3 Query: 249 LGEADPEVREIITKEKERQFKSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDELETLCQKRALAAFNLDENKWGVNVQPLSGSPANFEVYTAILKPHDRIMGLDLPHGGHLSHGFMTPKRRVSGTSIYFESMPYRLDESTGLVDYDMLEKTAILFRPKLIIAGASAYPRDFDYPRMRQIADAVGALLMMDMAHISGLVAASVVADPFKY 914 L E DP V EI+ E +RQ S+ LIASENFTSRAVM+A+GS ++NKYSEG PG RYYGGN++ID++ETLCQ+RALAAFNLD KWGVNVQ LSGSPAN +VY AI+ PH R+MGLDLP GGHLSHG+ T +++S S YFESMPYR+D +TGL+DYDMLE A LFRPK+++AG SAY R DY RMRQIAD+V A L++DMAHISGLV+A V+ PF+Y Sbjct: 12 LKEQDPTVAEIMRHEADRQRSSVVLIASENFTSRAVMDALGSVMSNKYSEGYPGARYYGGNKFIDQIETLCQERALAAFNLDPAKWGVNVQCLSGSPANMQVYQAIMPPHGRLMGLDLPSGGHLSHGYQTDTKKISAVSTYFESMPYRVDPNTGLIDYDMLEHDAQLFRPKILVAGTSAYCRLIDYARMRQIADSVNAYLVVDMAHISGLVSAGVIPSPFEY 233 The following BLAST results are available for this feature:
BLAST of CV885176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CV885176 ID=CV885176; Name=CV885176; organism=Citrus sinensis; type=EST; length=915bpback to top |