CV885169

Overview
NameCV885169
Unique NameCV885169
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 401.364 bits (1030), Expect = 3.716e-111
Identity = 200/258 (77.52%), Postives = 225/258 (87.21%), Query Frame = -1
Query:  124 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTHLSKDAK 897
            QRFGV+RQEQD               +GKFKDEIIPV TK+VDPKTG EK +T+SVDDGIRP TT+A L KLKP FKKDGTTTAGN+SQVSDGAGAVLLMKRS+A+QKGLP+LGVFR+F+AVGVDP++MGIGPAVAIPAAVK+AGL++DDI+LFEINEAFASQ+VYC  KLGLDPEK+NVNGGA+A+GHPLGATGARCVATLL EMKRRGKDCRFGV+SMCIG+GMGAAAVFERGD VDEL NAR V     LSKDA+
Sbjct:  205 QRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFERGDGVDELRNARKVEAQGLLSKDAR 462          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THIK1_ARATH (3-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidopsis thaliana GN=KAT1 PE=1 SV=2)

HSP 1 Score: 380.948 bits (977), Expect = 5.197e-105
Identity = 187/246 (76.02%), Postives = 216/246 (87.80%), Query Frame = -1
Query:  157 RFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERGDCVDELCNARMV 894
            RF V+R+EQD               SGKFKDEI PV TKIVDPKTG EK +T+SVDDGIRPNTT++ LAKLKP FK+DGTTTAGN+SQ+SDGAGAVLLM+R++A+QKGLPILGVFR+FSAVGVDP++MG+GPAVAIPAAVK+AGL+++D++LFEINEAFASQ+VYC  KLGLD EK+NVNGGA+A+GHPLGATGARCVATLL EMKRRGKDCRFGV+SMCIGSGMGAAAVFERG  VDELC+ R V
Sbjct:  198 RFNVSREEQDQAAVDSHRKAASATASGKFKDEITPVKTKIVDPKTGDEKPITVSVDDGIRPNTTLSGLAKLKPVFKEDGTTTAGNSSQLSDGAGAVLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAIPAAVKAAGLELNDVDLFEINEAFASQFVYCRNKLGLDAEKINVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGSGMGAAAVFERGGGVDELCDVRKV 443          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THIK5_ARATH (3-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidopsis thaliana GN=KAT5 PE=2 SV=2)

HSP 1 Score: 370.548 bits (950), Expect = 7.024e-102
Identity = 187/252 (74.21%), Postives = 211/252 (83.73%), Query Frame = -1
Query:  142 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFERGDCVDELCNARMVPTHTH 897
            +RFGVTR+EQD+              SGK KDEIIPV TKIVDP+T  EK + +SVDDG+RPN+ +ADLAKLK  FK++G+TTAGNASQ+SDGAGAVLLMKRSLA++KGLPILGVFRSF+  GV+PSVMGIGPAVAIPAA K AGL + DI+LFEINEAFASQYVY  KKL LD EKVNVNGGA+A+GHPLGATGARCVATLL EMKRRGKDCRFGVISMCIG+GMGAAAVFERGD VD L NAR+    +H
Sbjct:  206 ERFGVTREEQDMAAVESHKRAAAAIASGKLKDEIIPVATKIVDPETKAEKAIVVSVDDGVRPNSNMADLAKLKTVFKQNGSTTAGNASQISDGAGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAIPAATKLAGLNVSDIDLFEINEAFASQYVYSCKKLELDMEKVNVNGGAIAIGHPLGATGARCVATLLHEMKRRGKDCRFGVISMCIGTGMGAAAVFERGDSVDNLSNARVANGDSH 457          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 9.560e-75
Identity = 144/233 (61.80%), Postives = 181/233 (77.68%), Query Frame = -1
Query:  199 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 897
            +RFG++RQ+QD                G F+ EI+PV T ++D K G +K +T+S D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +RS A + GLPILGV RS++ VGV P VMGIGPA AIPAA++ AGL ++DI++FEINEAFASQ VYC++KLG+  EKVN  GGA+ALGHPLG TGAR V TLL+E+KRRG+   +GV+SMCIG+GMGAAAVFE
Sbjct:  190 ERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVTTTVLDDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2)

HSP 1 Score: 280.026 bits (715), Expect = 1.249e-74
Identity = 142/233 (60.94%), Postives = 179/233 (76.82%), Query Frame = -1
Query:  199 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 897
            +RFG++R++QD                G F+ EI+PV T + D K G ++ +T++ D+GIRP+TT+  LAKLKPAFKKDG+TTAGN+SQVSDGA A+LL +RS A + GLPILGV RS++ VGV P +MGIGPA AIP A++ AGL + D+++FEINEAFASQ  YC++KL L PEKVN  GGAVALGHPLG TGAR V TLL+E+KRRGK   +GV+SMCIG+GMGAAAVFE
Sbjct:  190 ERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDK-GTKRSITVTQDEGIRPSTTMEGLAKLKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRA-YGVVSMCIGTGMGAAAVFE 420          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 1.631e-74
Identity = 142/233 (60.94%), Postives = 180/233 (77.25%), Query Frame = -1
Query:  199 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 897
            +RFG++RQ+QD                G F+ EI+PV T ++D K G  K +T+S D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +RS A + GLPILGV RS++ VGV P +MGIGPA AIPAA++ AGL ++DI++FEINEAFASQ +YC++KLG+  EKVN  GGA+ALGHPLG TGAR V TLL+E+KRRG+   +GV+SMCIG+GMGAAAVFE
Sbjct:  190 ERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2)

HSP 1 Score: 279.641 bits (714), Expect = 1.631e-74
Identity = 142/233 (60.94%), Postives = 180/233 (77.25%), Query Frame = -1
Query:  199 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 897
            +RFG++RQ+QD                G F+ EI+PV T ++D K G  K +T+S D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +RS A + GLPILGV RS++ VGV P +MGIGPA AIPAA++ AGL ++DI++FEINEAFASQ +YC++KLG+  EKVN  GGA+ALGHPLG TGAR V TLL+E+KRRG+   +GV+SMCIG+GMGAAAVFE
Sbjct:  190 ERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDK-GDRKTITVSQDEGVRPSTTMEGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDIMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQALYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.781e-74
Identity = 144/233 (61.80%), Postives = 180/233 (77.25%), Query Frame = -1
Query:  199 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 897
            +RFGV+RQ+QD                G F  EI+PV T +++ K G +K +T+S D+G+RP+TT+  LAKLKPAFK  G+TTAGN+SQVSDGA AVLL +RS A + GLPILGV RS++ VGV P VMGIGPA AIPAA++ AGL ++DI++FEINEAFASQ VYC++KLG+  EKVN  GGA+ALGHPLG TGAR V TLL+E+KRRG+   +GV+SMCIG+GMGAAAVFE
Sbjct:  190 ERFGVSRQKQDAFALASQQKAASAQSRGCFHAEIVPVTTTVLNDK-GDKKTITVSQDEGVRPSTTMQGLAKLKPAFKDGGSTTAGNSSQVSDGAAAVLLARRSKAEELGLPILGVLRSYAVVGVPPDVMGIGPAYAIPAALQKAGLTVNDIDIFEINEAFASQAVYCVEKLGIPAEKVNPLGGAIALGHPLGCTGARQVVTLLNELKRRGRRA-YGVVSMCIGTGMGAAAVFE 420          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.295e-63
Identity = 129/236 (54.66%), Postives = 162/236 (68.64%), Query Frame = -1
Query:  199 QRFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVN---TKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAVFE 897
            +++GV+R++QD                GKFKDEI+PV    T+I +    +EK+   S D+G+RP TT   L+ L+PAF  DGT TAGN+SQ SDGA AV+LM R  A   GL  L  FRSF+  GV P VMGIGP  AIP A+K AGLQ+ DI LFE+NEAFASQ +  I++LG+D EKVNVNGGA+ALGHPLG TG +   +L+ EMKRR +  +FGV++MCIG GMGAA VFE
Sbjct:  156 KKYGVSREDQDAFAVRSHQNAAKALAEGKFKDEIVPVEVTVTEIGEDHKPMEKQFVFSQDEGVRPQTTADILSTLRPAFSVDGTVTAGNSSQTSDGAAAVMLMDREKADALGLAPLVKFRSFAVGGVPPEVMGIGPVEAIPRALKLAGLQLQDIGLFELNEAFASQAIQVIRELGIDEEKVNVNGGAIALGHPLGCTGTKLTLSLIHEMKRRNE--QFGVVTMCIGGGMGAAGVFE 389          
BLAST of CV885169 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 2.442e-62
Identity = 125/230 (54.35%), Postives = 160/230 (69.57%), Query Frame = -1
Query:  205 RFGVTRQEQDLXXXXXXXXXXXXXXSGKFKDEIIPVNTKIVDPKTGVEKRVTISVDDGIRPNTTIADLAKLKPAFKKDGTTTAGNASQVSDGAGAVLLMKRSLAVQKGLPILGVFRSFSAVGVDPSVMGIGPAVAIPAAVKSAGLQIDDINLFEINEAFASQYVYCIKKLGLDPEKVNVNGGAVALGHPLGATGARCVATLLSEMKRRGKDCRFGVISMCIGSGMGAAAV 894
            ++ V+R+ QD               +GKF  EI+P+ T ++D     EK VT++ DDGIRP  T   L KLKPAF  +GTT AGNASQ+SDGAGAVLLM+RS+A + G PIL  F     VGV P +MGIGPA AIPA ++  GL ++D+++FEINEAFASQ ++ I+  G+D  KVN  GGA+A+GHPLGATGAR  ATLLSE+K  GK  + GV SMCIG+GMGAA++
Sbjct:  184 KYNVSRKAQDAFAAKSYEKAAAAQAAGKFDQEILPIKTTVLDDDDN-EKEVTVNKDDGIRPGVTAEKLGKLKPAFSAEGTTHAGNASQISDGAGAVLLMRRSVAEKLGQPILAKFVHCKTVGVPPELMGIGPAYAIPAVLEDLGLTVNDVDVFEINEAFASQALFSIQHCGIDESKVNPRGGAIAIGHPLGATGARQFATLLSELKESGK--KVGVTSMCIGTGMGAASL 410          
The following BLAST results are available for this feature:
BLAST of CV885169 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 283
Match NameE-valueIdentityDescription
THIK2_ARATH3.716e-11177.523-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidop... [more]
THIK1_ARATH5.197e-10576.023-ketoacyl-CoA thiolase 1, peroxisomal OS=Arabidop... [more]
THIK5_ARATH7.024e-10274.213-ketoacyl-CoA thiolase 5, peroxisomal OS=Arabidop... [more]
THIKA_MOUSE9.560e-7561.803-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musc... [more]
THIK_HUMAN1.249e-7460.943-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapie... [more]
THIKB_RAT1.631e-7460.943-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus n... [more]
THIKA_RAT1.631e-7460.943-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus n... [more]
THIKB_MOUSE2.781e-7461.803-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musc... [more]
FADA_BACSU1.295e-6354.663-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fa... [more]
THIK_YARLI2.442e-6254.353-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia l... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_013A11_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_013_T3_A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885169 ID=CV885169; Name=CV885169; organism=Citrus sinensis; type=EST; length=897bp
GTTAGCAATGGCTTTATTATGTTTCAACTAATACCCATAGTACCCATCAT
CAACTAATTTTGAAATTCAACCAATCCATGCTTACATAAAACAGTGAGAT
GCAATTGCAAACAAATGCATCTACTTGGCATCCTTTGACAAGTGGGTGTG
AGTTGGAACCATTCGAGCATTGCATAGTTCGTCAACACAATCTCCTCTCT
CGAAAACTGCTGCAGCCCCCATGCCTGAGCCTATGCACATGGAGATCACT
CCAAATCGACAATCTTTGCCACGACGCTTCATCTCACTCAATAGAGTTGC
AACACAGCGTGCACCTGTCGCACCCAGAGGATGCCCAAGAGCCACTGCAC
CTCCATTAACATTGACTTTTTCAGGATCAAGCCCCAGTTTCTTAATACAA
TAAACATACTGGGATGCAAATGCCTCATTTATCTCAAACAAATTAATATC
ATCAATCTGAAGACCTGCAGACTTCACTGCAGCAGGTATTGCAACAGCTG
GGCCTATGCCCATGACAGAAGGATCTACACCAACAGCAGAAAAACTCCTG
AACACACCAAGAATTGGAAGACCCTTCTGCACAGCCAAACTTCTCTTCAT
AAGAAGAACTGCTCCAGCTCCATCACTGACCTGGCTAGCATTCCCAGCAG
TTGTCGTCCCATCCTTTTTAAATGCAGGCTTCAGCTTAGCCAGATCTGCA
ATTGTTGTGTTTGGTCGAATTCCATCATCCACAGAAATTGTGACACGCTT
CTCCACTCCAGTTTTTGGGTCCACAATCTTGGTATTCACTGGAATAATTT
CATCTTTAAACTTGCCAGATGCAGTTGCAGCAGCAGCACGCCTATGAGAT
TCAACGGCAGCCAGGTCTTGCTCTTGTCGTGTCACACCAAATCTCTG
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