CV885125

Overview
NameCV885125
Unique NameCV885125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9857 contig Csv1_Contig9857:149..949. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885125 vs. ExPASy Swiss-Prot
Match: SEC31_DICDI (Protein transport protein SEC31 OS=Dictyostelium discoideum GN=sec31 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.488e-28
Identity = 85/273 (31.14%), Postives = 133/273 (48.72%), Query Frame = 3
Query:   18 CEKKSQECKSEDDRETWGFLKVMFEDDGTARTKLLTHLGFTLPTEEKDTVQ--DDLSQEVNAIGLEDKVADKGAHQRDKEATIFTADNGE------DFFNNLPSPKA--DTPVSTSGNTFAVESSV-PSTEELKEEADGVEESSDPSFDDSVQRALVVGDYKGAVALCISANKMADALVIAHVGGAALWDRTRDQYLKMNRSPYLKVVSAMVNNDLLSLVNSRPLKFWKETLALLCTFAQREEWTMLCDTLASK-XXXXXXXXXXXXCYICAG 800
            C++K  +  S++++  WGFLKV F  D   R K+L +LG+ + T +K+  Q    L +     G  +   +    Q   E T  T +         D  NN+    +  DT  S +      +SS  PST+        +E   D   +  + +AL+VGD+  AV  C+   + +DAL++AH  G  LW +T++ Y ++ RSP+ +VVS +V  D   LV S  LK WK +LA+LCT+A   ++ +L   L  +             CYICAG
Sbjct:  491 CQEKIDQSTSDEEKSIWGFLKVKFAKDD--RLKILDYLGYDIETIKKELKQFLGTLPELPIESGFNELPIENVDDQSKPEPTTTTTNETVHLEPVVDENNNVVDADSFFDTAASDANKEQQDDSSSSPSTKSPTTTTTPIEFPGDEK-EQMITKALLVGDHNSAVECCLRLGRYSDALILAHAAGQELWKKTQEAYFEIVRSPFGRVVSCIVKRDFQLLVKSADLKDWKASLAILCTYAPPTDFKILSGILGDRLDKEASDLKSAILCYICAG 760          
BLAST of CV885125 vs. ExPASy Swiss-Prot
Match: SC31A_DANRE (Protein transport protein Sec31A OS=Danio rerio GN=sec31a PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.986e-26
Identity = 82/264 (31.06%), Postives = 129/264 (48.86%), Query Frame = 3
Query:   18 CEKKSQECKSEDDRETWGFLKVMFEDDGTARTKLLTHLGFTLPTEEKDTVQDDLSQEVNAIGLEDKVADKGAHQRDKEATIFTADNGEDFFNNLPSPKADTPVSTSGNTFAVESSVPSTEELKEEADGVEESSDPSFDDSVQRALVVGDYKGAVALCISANKMADALVIAHVGGAALWDRTRDQYLKMNRSPYLKVVSAMVNNDLLSLVNSRPLKFWKETLALLCTFAQREEWTMLCDTLASK---XXXXXXXXXXXXCYICAG 800
            C+ K +  ++E +R  W FLKV FE+D  AR K L  LG+          +++L+ ++ A  LE     K A   DKE  +   +  E   +++P  + +  V  + NT    +       LK   D          D  + +AL+ GDY+ AV LC+  N+MAD +++A  GG  L  +T+ +Y     S   K++SA+V  D L ++ +  L+ WKE LA + T+A+ EE++ LC  L S+               CYICAG
Sbjct:  456 CQNKIETVQNEFERTVWSFLKVNFEED--ARLKYLELLGYE---------KEELALKI-ASALEGNCKPKEADM-DKEE-VLAEEEAESDLDDIPVNEEEPVVEETSNTEVPPAPASDAINLKVSQD---------IDGLITQALLTGDYEAAVNLCLHDNRMADGIILAIAGGPELLAKTQRKYFSKTESKISKLISAVVMKDWLDILETCDLQNWKEALAAVMTYAKPEEFSALCGLLGSRLESSEDVELQAQACLCYICAG 696          
BLAST of CV885125 vs. ExPASy Swiss-Prot
Match: SC31A_PONAB (Protein transport protein Sec31A OS=Pongo abelii GN=SEC31A PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.852e-23
Identity = 79/264 (29.92%), Postives = 134/264 (50.76%), Query Frame = 3
Query:   18 CEKKSQECKSEDDRETWGFLKVMFEDDGTARTKLLTHLGFTLPTEEKDTVQDDLSQEVNAIGLEDKVADKGAHQRDKEATIFTADNGEDFFNNLPSPKADTPVSTSGNTFAVESSVPSTEELKEEADGVEESSDPSFDDSVQRALVVGDYKGAVALCISANKMADALVIAHVGGAALWDRTRDQYLKMNRSPYLKVVSAMVNNDLLSLVNSRPLKFWKETLALLCTFAQREEWTMLCDTLASK---XXXXXXXXXXXXCYICAG 800
            C+KK    ++E ++  W FLKV FEDD  +R K L  LG+          ++DL +++ A+ L +KV   GA+   K++      +GE+      SP A+  +        ++     +E L         S     D  + +AL+ G+++ AV LC+  N+MADA+++A  GG  L  RT+ +Y   ++S   ++++A+V  +   +V S  LK W+E LA + T+A+ +E++ LCD L ++               CYICAG
Sbjct:  458 CQKKIDASQTEFEKNVWSFLKVNFEDD--SRGKYLELLGYR---------KEDLGKKI-ALAL-NKV--DGANVALKDSDQVAQSDGEE------SPAAEEQLLGEH----IKEEKEESEFLPSSGGTFNISVSGDIDGLITQALLTGNFESAVDLCLHDNRMADAIILAIAGGQELLARTQKKYFAKSQSKITRLITAVVMKNWKEIVESCDLKNWREALAAVLTYAKPDEFSALCDLLGTRLENEGDSLLQTQACLCYICAG 696          
BLAST of CV885125 vs. ExPASy Swiss-Prot
Match: SC31A_HUMAN (Protein transport protein Sec31A OS=Homo sapiens GN=SEC31A PE=1 SV=3)

HSP 1 Score: 109.768 bits (273), Expect = 1.852e-23
Identity = 79/264 (29.92%), Postives = 134/264 (50.76%), Query Frame = 3
Query:   18 CEKKSQECKSEDDRETWGFLKVMFEDDGTARTKLLTHLGFTLPTEEKDTVQDDLSQEVNAIGLEDKVADKGAHQRDKEATIFTADNGEDFFNNLPSPKADTPVSTSGNTFAVESSVPSTEELKEEADGVEESSDPSFDDSVQRALVVGDYKGAVALCISANKMADALVIAHVGGAALWDRTRDQYLKMNRSPYLKVVSAMVNNDLLSLVNSRPLKFWKETLALLCTFAQREEWTMLCDTLASK---XXXXXXXXXXXXCYICAG 800
            C+KK    ++E ++  W FLKV FEDD  +R K L  LG+          ++DL +++ A+ L +KV   GA+   K++      +GE+      SP A+  +        ++     +E L         S     D  + +AL+ G+++ AV LC+  N+MADA+++A  GG  L  RT+ +Y   ++S   ++++A+V  +   +V S  LK W+E LA + T+A+ +E++ LCD L ++               CYICAG
Sbjct:  458 CQKKIDASQTEFEKNVWSFLKVNFEDD--SRGKYLELLGYR---------KEDLGKKI-ALAL-NKV--DGANVALKDSDQVAQSDGEE------SPAAEEQLLGEH----IKEEKEESEFLPSSGGTFNISVSGDIDGLITQALLTGNFESAVDLCLHDNRMADAIILAIAGGQELLARTQKKYFAKSQSKITRLITAVVMKNWKEIVESCDLKNWREALAAVLTYAKPDEFSALCDLLGTRLENEGDSLLQTQACLCYICAG 696          
BLAST of CV885125 vs. ExPASy Swiss-Prot
Match: SC31A_CHICK (Protein transport protein Sec31A OS=Gallus gallus GN=SEC31A PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.418e-23
Identity = 76/267 (28.46%), Postives = 132/267 (49.44%), Query Frame = 3
Query:   18 CEKKSQECKSEDDRETWGFLKVMFEDDGTARTKLLTHLGFTLPTEEKDTVQDDLSQEVNAIGLEDKVADKGAHQRDKEATIFTADNGEDFFNNLPSPKADTPVSTSGNTFAVESSVPS---TEELKEEADGVEESSDPSFDDSVQRALVVGDYKGAVALCISANKMADALVIAHVGGAALWDRTRDQYLKMNRSPYLKVVSAMVNNDLLSLVNSRPLKFWKETLALLCTFAQREEWTMLCDTLASK---XXXXXXXXXXXXCYICAG 800
            C+KK    +++ +R  W FLKV FE+D  +R K L  LG+      KD +++ ++  +N    ++  AD    +   E+ +   + G++               T+   F  E +  S   TE+L  E      S     D  + +AL+ G+++ AV LC+  N+MADA+++A  GG  L  RT+++Y    +S   ++++A+V  +   +V S  L+ W+E LA + T+A+ +E+  LCD L ++               CYICAG
Sbjct:  458 CQKKVDMAQADFERNVWSFLKVNFEED--SRAKYLELLGY-----RKDDLKNKITSALNLN--KECCADGELGEAPTESDVPLLNKGDEG-------------QTAEEHFLGERAKDSKQETEDLGSERKTFNISVSGDVDGLITQALLTGNFESAVDLCLHDNRMADAIILAIAGGQELLSRTQEKYFSKIQSKITRLITAVVTKNWKEIVLSCDLQNWREALAAVLTYARPDEFAALCDLLGNRLESEGDSLLRTQACLCYICAG 702          
BLAST of CV885125 vs. ExPASy Swiss-Prot
Match: SEC31_CHAGB (Protein transport protein SEC31 OS=Chaetomium globosum GN=SEC31 PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.159e-23
Identity = 72/272 (26.47%), Postives = 127/272 (46.69%), Query Frame = 3
Query:   12 ALCEKKSQECKSEDDRETWGFLKVMFEDDGTARTKLLTHLGFT----LPTEEKDTVQDDLSQEVNAIGLEDKVAD-KGAHQRDKEATIFTAD--NGEDFFNNLP---SPKADTPVSTSGNTFAVESSVPSTEELKEEADGVEESSDPSFDDSVQRALVVGDYKGAVALCISANKMADALVIAHVGGAALWDRTRDQYL--KMNRSPYLKVVSAMVNNDLLSLVNSRPLKFWKETLALLCTFAQREEWTMLCDTLASKXXXXXXXXXXXXCYI 791
            A+C+  + + ++E+++  W  LK + E DG  RTK+L +LGF       T  ++T   +  +E    GL     +   A ++ K  T    D   G+DF ++L      K D P    G     E                         D V +A+++G+++ AV +C+  +++ADA ++A+ GG  L D+ +  YL  K     YL+++++++  +L  +V +  L  WKET+  LCTFA+  E+  LC+ L  +            CY+
Sbjct:  429 AICDSNAADAQTEEEKADWQVLKALSESDG--RTKILEYLGFAKDDEASTSPEETEVAEPKEEPKETGLAPPQPNGDDAKKKHKRVTSMWGDLDEGDDFLSDLTPAKGAKTDQPFQLLGEGNTTE-------------------------DRVTKAIILGNFEKAVDICLKEDRVADAFILANCGGKELVDKVQTSYLAQKKGTPSYLRLINSVIGKNLWDVVYNADLGNWKETMVTLCTFAEPSEFPDLCEALGDRIYESGSRQDASFCYL 673          
BLAST of CV885125 vs. ExPASy Swiss-Prot
Match: SEC31_MAGGR (Protein transport protein SEC31 OS=Magnaporthe grisea GN=SEC31 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.388e-23
Identity = 72/268 (26.87%), Postives = 141/268 (52.61%), Query Frame = 3
Query:    6 LRALCEKKSQECKSEDDRETWGFLKVMFEDDGTARTKLLTHLGFTL---PTEEKDTVQDDLSQEVNAIGLEDKVADKGAHQRDKEATIFT-ADNGEDFFNNLPSPKADTPVSTSGNTFAVESSVPSTEELKEEADGVEESSDPSFDDSVQRALVVGDYKGAVALCISANKMADALVIAHVGGAALWDRTRDQYLKMNR-SP-YLKVVSAMVNNDLLSLVNSRPLKFWKETLALLCTFAQREEWTMLCDTLASKXXXXXXXXXXXXCYI 791
            L+++C+   +  KSED+   W  ++ +  ++   R +++ +LG +    P   + T ++   +E   +    +   K  H++++ +T FT   +G+DF   L + K     + + + F +         L+E   G+E        DSV RA+++G++  AV +CI A+++ADA +IA+ GG  L D+ +  Y+   + SP YL+++ +++N++L  +V +  +  WKET+A LCTFA+ EE+  LC+ L  +            C++
Sbjct:  432 LKSICQSHLENAKSEDETTAWKVMETLVAEN--PRKQVVEYLGLSAEEAPASPESTTEEGAEKEDAEVEPVKESFKK--HKKNRLSTFFTEGGDGDDFLAGLAATKG----AKTDSPFHL---------LREGNTGLE--------DSVTRAIMLGNFAKAVEICIKADRIADAFLIANCGGKELVDQVQTAYISAKKGSPSYLRLLGSVINDNLWDVVYNADIADWKETMATLCTFAKPEEFPDLCEALGDRLFETGSRQDASFCFL 674          
BLAST of CV885125 vs. ExPASy Swiss-Prot
Match: SC31A_RAT (Protein transport protein Sec31A OS=Rattus norvegicus GN=Sec31a PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.047e-22
Identity = 75/269 (27.88%), Postives = 131/269 (48.70%), Query Frame = 3
Query:   18 CEKKSQECKSEDDRETWGFLKVMFEDDGTARTKLLTHLGFTLPTEEKDTVQDDLSQEVNAIGLED---KVADKGAHQRDKEATIFTADNGEDFFNNLPSPK--ADTPVSTSGNTFAVESSVPSTEELKEEADGVEESSDPSFDDSVQRALVVGDYKGAVALCISANKMADALVIAHVGGAALWDRTRDQYLKMNRSPYLKVVSAMVNNDLLSLVNSRPLKFWKETLALLCTFAQREEWTMLCDTLASK---XXXXXXXXXXXXCYICAG 800
            C+KK    +++ ++  W FLKV FE+D  +R K L  LG+      ++ + + ++  +N +   D   K +D+ A    +E+    A+ G+     +   K   D   S  G TF +  S                      D  + RAL+ G+++ AV LC+  N+MADA+++A  GG  L  +T+ +Y   ++S   ++++A+V  +   +V S  LK W+E LA + T+A+ +E++ LCD L ++               CYICAG
Sbjct:  457 CQKKIDASQTDFEKNVWSFLKVNFEED--SRGKYLELLGY-----RREDLGEKIALALNRVDGSDVALKDSDRVAQSDGEESP---AEEGQLLGERIKEEKQECDFLPSAGGGTFNISVS-------------------GDIDGLITRALLTGNFESAVDLCLHDNRMADAIILAIAGGQELLAQTQKKYFAKSQSKITRLITAVVMKNWKEIVESCDLKNWREALAAVLTYAKPDEFSALCDLLGARLESEGDSLLRTQACLCYICAG 696          
BLAST of CV885125 vs. ExPASy Swiss-Prot
Match: SC31A_MOUSE (Protein transport protein Sec31A OS=Mus musculus GN=Sec31a PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.047e-22
Identity = 76/264 (28.79%), Postives = 131/264 (49.62%), Query Frame = 3
Query:   18 CEKKSQECKSEDDRETWGFLKVMFEDDGTARTKLLTHLGFTLPTEEKDTVQDDLSQEVNAIGLEDKVADKGAHQRDKEATIFTADNGEDFFNNLPSPKADTPVSTSGNTFAVESSVPSTEELKEEADGVEESSDPSFDDSVQRALVVGDYKGAVALCISANKMADALVIAHVGGAALWDRTRDQYLKMNRSPYLKVVSAMVNNDLLSLVNSRPLKFWKETLALLCTFAQREEWTMLCDTLAS---KXXXXXXXXXXXXCYICAG 800
            C+KK +  ++E ++  W FLKV FE+D  +R K L  LG+          ++DL Q++ A+ L +KV       +D +       +GE+      SP A+  +        ++      + L         S     D  + RAL+ G+++ AV LC+  N+MADA+++A  GG  L  +T+ +Y   ++S   ++++A+V  +   +V S  LK W+E LA + T+A+ +E++ LCD L +   +            CYICAG
Sbjct:  457 CQKKIEASQTEFEKNVWSFLKVNFEED--SRGKYLELLGYR---------KEDLGQKI-ALAL-NKVDGPDVALKDSDQV--AQSDGEE------SPAAEEQLLGE----RIKEEKQECDFLPSAGGTFNISVSGDIDGLITRALLTGNFESAVDLCLHDNRMADAIILAIAGGQELLAQTQKKYFAKSQSKITRLITAVVMKNWREIVESCDLKNWREALAAVLTYAKPDEFSALCDLLGTRLEREGDSLLRTQACLCYICAG 695          
BLAST of CV885125 vs. ExPASy Swiss-Prot
Match: SEC31_NEUCR (Protein transport protein sec-31 OS=Neurospora crassa GN=sec-31 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.016e-21
Identity = 69/268 (25.75%), Postives = 128/268 (47.76%), Query Frame = 3
Query:    6 LRALCEKKSQECKSEDDRETWGFLKVMFEDDGTARTKLLTHLGFTL--PTEEKDTVQDDLSQEVNAIGLEDKVADKGAHQRDKEATIF--TADNGEDFFNNLPSPKADTPVSTSGNTFAVESSVPSTEELKEEADGVEESSDPSFDDSVQRALVVGDYKGAVALCISANKMADALVIAHVGGAALWDRTRDQYLKMNR-SP-YLKVVSAMVNNDLLSLVNSRPLKFWKETLALLCTFAQREEWTMLCDTLASKXXXXXXXXXXXXCYI 791
            + ++CE+  +  K+++++  W  ++ + E DG  RTK++  LGF    P EE    +  +S E           + G  ++ +         D+GEDF + + + K     + + N F +  SV +T                  +D + RAL++G ++ AV +C+   + +DA +IA+ G   L ++ +  YL+  R SP YL+++S++V  +L  +  +  L  WKET+  LCT+A   E+  LC+ L  +            CY+
Sbjct:  427 IASICEEHIENAKTDEEKAEWQVMQTLSESDG--RTKIIERLGFIKDEPVEEAKEAESPMSPEPKQEDSASLKPNGGEAKKHRRVVSMWGDGDDGEDFLSEIAATKG----AKTDNPFNL-LSVGNTH----------------LEDQITRALILGKFEKAVEICLKEERWSDAFLIANCGSKELVEKVQTAYLQQKRGSPSYLRLISSVVAKNLWDIAYNADLADWKETMVTLCTYADPSEFPDLCEALGDRILESGNRKDASFCYL 671          
The following BLAST results are available for this feature:
BLAST of CV885125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
SEC31_DICDI9.488e-2831.14Protein transport protein SEC31 OS=Dictyostelium d... [more]
SC31A_DANRE3.986e-2631.06Protein transport protein Sec31A OS=Danio rerio GN... [more]
SC31A_PONAB1.852e-2329.92Protein transport protein Sec31A OS=Pongo abelii G... [more]
SC31A_HUMAN1.852e-2329.92Protein transport protein Sec31A OS=Homo sapiens G... [more]
SC31A_CHICK2.418e-2328.46Protein transport protein Sec31A OS=Gallus gallus ... [more]
SEC31_CHAGB3.159e-2326.47Protein transport protein SEC31 OS=Chaetomium glob... [more]
SEC31_MAGGR5.388e-2326.87Protein transport protein SEC31 OS=Magnaporthe gri... [more]
SC31A_RAT2.047e-2227.88Protein transport protein Sec31A OS=Rattus norvegi... [more]
SC31A_MOUSE2.047e-2228.79Protein transport protein Sec31A OS=Mus musculus G... [more]
SEC31_NEUCR1.016e-2125.75Protein transport protein sec-31 OS=Neurospora cra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012G09_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885125 ID=CV885125; Name=CV885125; organism=Citrus sinensis; type=EST; length=801bp
CTTCATTGAGAGCTTTGTGCGAGAAAAAATCACAAGAATGCAAATCTGAG
GATGACAGAGAAACATGGGGCTTCCTAAAAGTTATGTTTGAAGACGATGG
CACAGCTAGAACGAAGTTGCTTACCCACCTTGGTTTTACTTTACCAACTG
AAGAAAAAGATACTGTACAAGATGATCTTTCCCAGGAAGTAAATGCGATT
GGACTTGAGGATAAAGTAGCAGATAAAGGGGCACATCAACGTGATAAAGA
AGCCACCATCTTTACTGCTGATAATGGAGAAGATTTCTTTAACAATCTTC
CAAGTCCAAAAGCAGACACGCCTGTATCAACTTCTGGTAATACTTTTGCT
GTTGAGAGTTCTGTTCCTAGTACAGAAGAACTAAAAGAAGAAGCTGATGG
AGTGGAGGAGAGTTCGGATCCATCATTTGATGATAGTGTTCAACGTGCTT
TGGTTGTTGGAGACTATAAGGGGGCAGTTGCACTATGCATATCTGCAAAT
AAAATGGCTGATGCTTTAGTTATTGCTCACGTCGGTGGTGCTGCTTTGTG
GGATCGTACTCGAGATCAGTATCTTAAGATGAATCGTTCGCCTTACTTGA
AGGTTGTTTCTGCTATGGTGAATAATGATCTGTTGAGCCTTGTGAACTCC
AGGCCTCTGAAATTTTGGAAAGAAACACTTGCTCTTCTCTGTACTTTCGC
TCAGAGAGAGGAATGGACTATGCTTTGTGACACACTTGCTTCAAAACTAT
TGGCTGCTGGTAATACTCTGGCGGCAACTCTTTGTTATATATGTGCTGGG
A
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