CV885122

Overview
NameCV885122
Unique NameCV885122
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2321 contig Csv1_Contig2321:238..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885122 vs. ExPASy Swiss-Prot
Match: LINS_ARATH (Linalool synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS14 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.275e-70
Identity = 126/192 (65.62%), Postives = 153/192 (79.69%), Query Frame = -1
Query:  139 SNKVYKEHGYNPVHSLRKGWGSLCNAFLTEAKWFASGQLPKAEEYLKNGIVSSGVHLGLVHIFFLLGHGITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHAMDKISDAWKRLNQECLSPNPFSASFTRASLNIARMVPLMYSYDDNQRLPRLEEYIKSLL 714
            S K+YK HG+NP ++LR+ W SLC AFL EAKWF SG LP  EEY+KNG+VSSGVHL ++H + LLG  +T E V LI+SNP IVSS ATILRLWDDLGSAKDENQDG DGSY+  Y+ E++  T ++A+ H   KIS AWKRLN+ECL+P PFS SF++A LNIAR VPLMYSYDD+QRLP  +EY+KSL+
Sbjct:  380 SMKIYKSHGWNPTYALRQSWASLCKAFLVEAKWFNSGYLPTTEEYMKNGVVSSGVHLVMLHAYILLGEELTKEKVELIESNPGIVSSAATILRLWDDLGSAKDENQDGTDGSYVECYLNEYKGSTVDEARTHVAQKISRAWKRLNRECLNPCPFSRSFSKACLNIARTVPLMYSYDDDQRLP--DEYLKSLM 569          
BLAST of CV885122 vs. ExPASy Swiss-Prot
Match: TPS02_ARATH (Probable terpenoid synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS02 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.476e-26
Identity = 67/199 (33.67%), Postives = 113/199 (56.78%), Query Frame = -1
Query:  124 VYKEHGYNPVHSLRKGWGSLCNAFLTEAKWFASGQLPKAEEYLKNGIVSSGVHLGLVHIFFLLGHGITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHAMDKISDAWKRLNQECLSPNPFS--ASFTRASLNIARMVPLMYSYDDNQRLP---RLEEYIKSLLFDNLP 705
            V ++ G N +  L++ W  L   FLTE+KW+ +G  P  EEY++NG++SS V   L+H+F +L   I+ +T+     N  +V S ATILRL +DL ++ +E   G+    +  YM E +  + E+A++H    ISD+W  +N +  + +  S    F  A+ N+ R+V  +Y + D    P   +  +YI+S+LF+ +P
Sbjct:  402 VLRDKGLNVIPYLKQVWTDLFKTFLTESKWYKTGHKPSFEEYMQNGVISSSVPTILLHLFSVLSDHISDQTLTDDSKNHSVVRSCATILRLANDLATSTEEMARGDSPKSVQCYMYETR-ASEEEARRHMQSMISDSWDIINSDLKTAHTSSLPRGFLAAAANLNRVVQCIYRHGDGHGSPEKTKTVDYIQSVLFNPVP 599          
BLAST of CV885122 vs. ExPASy Swiss-Prot
Match: MYRS_QUEIL (Myrcene synthase, chloroplastic OS=Quercus ilex PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.632e-25
Identity = 66/194 (34.02%), Postives = 106/194 (54.64%), Query Frame = -1
Query:  124 KEHGYNPVHSLRKGWGSLCNAFLTEAKWFASGQLPKAEEYLKNGIVSSGVHLGLVHIFFLLGHGITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHAMDKISDAWKRLNQECLSPNPFSASFTRASLNIARMVPLMYSYDDNQRLPRLE--EYIKSLLFDNLP 699
            KE  ++ +  L+K W  LC  +L EAKW+++   P  +EY++N  +S G    LVH +F + + IT E +  ++  P I+   + I RL DDLG++ DE + G+    I  YM E    + E A+++    IS  WK++N++  + +PFS  F   +LN+ARM   +Y + D   L   E  + I SLL   +P
Sbjct:  401 KEQRFHIIKYLKKAWVDLCRYYLVEAKWYSNKYRPSLQEYIENAWISIGAPTILVHAYFFVTNPITKEALDCLEEYPNIIRWSSIIARLADDLGTSTDELKRGDVPKAIQCYMNE-TGASEEGAREYIKYLISATWKKMNKDRAASSPFSHIFIEIALNLARMAQCLYQHGDGHGLGNRETKDRILSLLIQPIP 593          
BLAST of CV885122 vs. ExPASy Swiss-Prot
Match: SCS_SALOF (1,8-cineole synthase, chloroplastic OS=Salvia officinalis PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.381e-24
Identity = 65/192 (33.85%), Postives = 104/192 (54.17%), Query Frame = -1
Query:  133 KEHGYNPVHSLRKGWGSLCNAFLTEAKWFASGQLPKAEEYLKNGIVSSGVHLGLVHIFFLLGHGITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHAMDKISDAWKRLNQECLSPNPFSASFTRASLNIARMVPLMYSYDDN---QRLPRLEEYIKSLLFD 699
            ++ G+N    LRK W  L  ++L EAKW+  G  P  EEY+KN  +S G    L H+FF L   I  E    +     IV +  TILRL DD+G++ DE + G+    +  YM E ++ + E+A++H    I   WK +N+E ++ + FS  F + S N+ARM   +Y ++ +    +   + + ++ LLFD
Sbjct:  399 RDKGFNSTPYLRKAWVDLVESYLIEAKWYYMGHKPSLEEYMKNSWISIGGIPILSHLFFRLTDSIEEEDAESMHKYHDIVRASCTILRLADDMGTSLDEVERGDVPKSVQCYMNE-KNASEEEAREHVRSLIDQTWKMMNKEMMT-SSFSKYFVQVSANLARMAQWIYQHESDGFGMQHSLVNKMLRGLLFD 588          
BLAST of CV885122 vs. ExPASy Swiss-Prot
Match: TPS1_CANSA ((-)-limonene synthase, chloroplastic OS=Cannabis sativa GN=TPS1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.912e-22
Identity = 66/177 (37.29%), Postives = 95/177 (53.67%), Query Frame = -1
Query:  184 VYKEHGYNPVHSLRKGWGSLCNAFLTEAKWFASGQLPKAEEYLKNGIVSSGVHLGLVHIFFLLGHGITSETVR-LIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAED-AQKHAMDKISDAWKRLNQECLSPNP-FSASFTRASLNIARMVPLMYSYDD 705
            V +EHG+  +   +K    LC   L EAKWF SG  P  +EY++NG +S G  + L+H +F   + +T E +  L D +P IV   + ILRL DDLG+  DE + G+    I  YM  H    +ED A++H    IS++WK +N E  + N  FS  F +   N+ R    +Y Y D
Sbjct:  425 VLQEHGFVHIEYFKKLMVELCKHHLQEAKWFYSGYKPTLQEYVENGWLSVGGQVILMHAYFAFTNPVTKEALECLKDGHPNIVRHASIILRLADDLGTLSDELKRGDVPKSIQCYM--HDTGASEDEAREHIKYLISESWKEMNNEDGNINSFFSNEFVQVCQNLGRASQFIYQYGD 599          
BLAST of CV885122 vs. ExPASy Swiss-Prot
Match: TPS2_CANSA ((+)-alpha-pinene synthase, chloroplastic OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.094e-21
Identity = 63/176 (35.80%), Postives = 92/176 (52.27%), Query Frame = -1
Query:  184 VYKEHGYNPVHSLRKGWGSLCNAFLTEAKWFASGQLPKAEEYLKNGIVSSGVHLGLVHIFFLLGHGITSETVR-LIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAED-AQKHAMDKISDAWKRLNQECLSPNPFSASFTRASLNIARMVPLMYSYDD 705
            V +EH +  V  L+  W  LC  +L EAKWF SG  P  ++Y++N  +S G  +  V+ FF L   IT+E +  L + +       + +LRL DDLG+  DE + G+    I  YM  H    +ED A++H    IS+ WK +N E    + FS  F +A  N+ RM   MY + D
Sbjct:  419 VLEEHNFVTVEYLKNSWAELCRCYLEEAKWFYSGYKPTLKKYIENASLSIGGQIIFVYAFFSLTKSITNEALESLQEGHHAACRQGSLMLRLADDLGTLSDEMKRGDVPKSIQCYM--HDTGASEDEAREHIKFLISEIWKEMNDEDEYNSIFSKEFVQACKNLGRMSLFMYQHGD 592          
BLAST of CV885122 vs. ExPASy Swiss-Prot
Match: OCIS_ARATH ((E)-beta-ocimene synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS03 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.094e-21
Identity = 67/198 (33.84%), Postives = 104/198 (52.53%), Query Frame = -1
Query:  124 VYKEHGYNPVHSLRKGWGSLCNAFLTEAKWFASGQLPKAEEYLKNGIVSSGVHLGLVHIFFLLGHGITSETVRLIDS-NPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHAMDKISDAWKRLNQECLSPNPFSASFTRASLNIARMVPLMYSYDDNQRLP---RLEEYIKSLLFDNLP 705
            V ++ G+N +  L++ W  +C  FL EAKW+ SG  P  EEY++NG +SS V   L+H+F LL    + +T+ ++ S N  +V S ATILRL +DL ++ +E   G+    +  +M E     AE ++ +    I  AW  LN E  S       F  A+ N+ R+   +Y Y D    P   +   +++SLL   LP
Sbjct:  372 VLRDKGFNVIPYLKESWADMCTTFLKEAKWYKSGYKPNFEEYMQNGWISSSVPTILLHLFCLL----SDQTLDILGSYNHSVVRSSATILRLANDLATSSEELARGDTMKSVQCHMHETGASEAE-SRAYIQGIIGVAWDDLNMEKKSCR-LHQGFLEAAANLGRVAQCVYQYGDGHGCPDKAKTVNHVRSLLVHPLP 563          
BLAST of CV885122 vs. ExPASy Swiss-Prot
Match: RLC1_CITLI ((R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.159e-21
Identity = 68/200 (34.00%), Postives = 106/200 (53.00%), Query Frame = -1
Query:  118 VYKEHGYNPVHSLRKGWGSLCNAFLTEAKWFASGQLPKAEEYLKNGIVSSGVHLGLVHIFFLLG-HGITSETVRLIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHAMDKISDAWKRLNQECL-SPNPFSASFTRASLNIARMVPLMYSYDDNQRLPRLE--EYIKSLLFDNLPTQ 705
            V K+  ++ + S++  W  L  A+L EAKW+ S   PK EEYL+NG+VS    L ++ I +L G + I  + +  ++SNP IV   + I RL DDLG++ DE Q G+    I  YM E    + E A++H  D +   WK++N       +P + + T   LN+ RM   MY + D   +   E  +   +LLF  +P +
Sbjct:  395 VLKQQDFDLLLSIKNAWLGLIQAYLVEAKWYHSKYTPKLEEYLENGLVSITGPL-IITISYLSGTNPIIKKELEFLESNPDIVHWSSKIFRLQDDLGTSSDEIQRGDVPKSIQCYMHE-TGASEEVARQHIKDMMRQMWKKVNAYTADKDSPLTGTTTEFLLNLVRMSHFMYLHGDGHGVQNQETIDVGFTLLFQPIPLE 592          
BLAST of CV885122 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.431e-21
Identity = 59/189 (31.22%), Postives = 94/189 (49.74%), Query Frame = -1
Query:  124 RKGWGSLCNAFLTEAKWFASGQLPKAEEYLKNGIVSSGVHLGLVHIFFLLGHGITSETVR-LIDSNPPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHAMDKISDAWKRLNQE----CLSPNPFSASFTRASLNIARMVPLMYSYDDNQRLP---RLEEYIKSLLFDNLP 666
            +K W  LC A+L EAKW+  G  P  EEY++N  +S      L+H +      I+ + +  L+     +V   AT+LRL +DL ++ DE   G+    +  YM E   V+ E+A+ H    IS  W  +N E      S +  S  F   ++N+ARM   MY + D    P   ++ + +++LL D +P
Sbjct:  409 KKSWADLCKAYLVEAKWYKGGYKPSVEEYMQNAWISISAPTMLIHFYCAFSGQISVQILESLVQQQQDVVRCSATVLRLANDLATSPDELARGDVLKSVQCYMHE-TGVSEEEARTHVQQMISHTWDEMNYEARTAARSSSLLSRRFVETAMNLARMSQCMYQHGDGHGCPDKAKIVDRVQTLLVDPIP 596          
BLAST of CV885122 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.580e-20
Identity = 61/189 (32.28%), Postives = 94/189 (49.74%), Query Frame = -1
Query:  124 LRKGWGSLCNAFLTEAKWFASGQLPKAEEYLKNGIVSSGVHLGLVHIFFLLGHGITSETVRLIDSN-PPIVSSVATILRLWDDLGSAKDENQDGNDGSYIYYYMMEHQDVTAEDAQKHAMDKISDAWKRLNQE---CLSPNPFSASFTRASLNIARMVPLMYSYDDNQRLP---RLEEYIKSLLFDNLP 669
            L+K W  LC  +L EAKW+  G  P  EEY++N  +S      L+H + +    I+ + +  +  +   IV   AT+LRL +DLG++  E   G+    +  YM E    + E A+ H    ISD W  +N E     + +  S  F  A++N+ARM   MY Y D    P   +  + ++SLL D +P
Sbjct:  406 LKKSWADLCRTYLVEAKWYKRGYKPSLEEYMQNAWISISAPTILIHFYCVFSDQISVQNLETLSQHRQHIVRCSATVLRLANDLGTSPTELARGDVLKSVQCYMHE-TGASEERARDHVHQMISDMWDDMNSETKTACNSSSRSRGFKEAAMNLARMSQCMYQYGDGHGCPEKAKTIDRVQSLLVDPIP 593          
The following BLAST results are available for this feature:
BLAST of CV885122 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
LINS_ARATH1.275e-7065.63Linalool synthase, chloroplastic OS=Arabidopsis th... [more]
TPS02_ARATH1.476e-2633.67Probable terpenoid synthase 2, chloroplastic OS=Ar... [more]
MYRS_QUEIL1.632e-2534.02Myrcene synthase, chloroplastic OS=Quercus ilex PE... [more]
SCS_SALOF1.381e-2433.851,8-cineole synthase, chloroplastic OS=Salvia offi... [more]
TPS1_CANSA4.912e-2237.29(-)-limonene synthase, chloroplastic OS=Cannabis s... [more]
TPS2_CANSA1.094e-2135.80(+)-alpha-pinene synthase, chloroplastic OS=Cannab... [more]
OCIS_ARATH1.094e-2133.84(E)-beta-ocimene synthase, chloroplastic OS=Arabid... [more]
RLC1_CITLI4.159e-2134.00(R)-limonene synthase 1 OS=Citrus limon PE=2 SV=1[more]
MYRS2_ARATH5.431e-2131.22Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]
CINS_ARATH1.580e-2032.281,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_2_012G07_T7 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T7_G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885122 ID=CV885122; Name=CV885122; organism=Citrus sinensis; type=EST; length=714bp
TTGAAATGCTGGCATAAAATTGAATATTTCTTCTTGAAGATGCTGAACAT
AAGATAAAAGAAACTTCCATAGTATACGTACGTAGGTAAGGAGCTTTATC
ACTAACTAGTACACTCCTTGAGTAGGCAAATTATCGAAGAGGAGGGACTT
AATATACTCCTCGAGTCTCGGAAGCCTTTGATTGTCATCATAGCTATACA
TCAAAGGAACCATTCTGGCAATGTTAAGAGAAGCCCTTGTGAAAGATGCT
GAAAATGGATTTGGGGAGAGGCATTCCTGGTTTAGGCGCTTCCATGCATC
TGAAATCTTATCCATAGCATGCTTTTGTGCATCTTCAGCTGTTACGTCTT
GGTGCTCCATCATGTAGTAATATATGTAAGATCCATCGTTGCCATCTTGA
TTTTCATCCTTAGCACTTCCTAAGTCGTCCCAAAGTCGAAGAATTGTTGC
GACGGACGATACTATGGGCGGGTTGCTGTCAATGAGTCGCACAGTTTCAC
TGGTGATGCCATGACCCAGGAGAAAGAAAATGTGCACAAGTCCCAGGTGT
ACCCCTGAGCTAACAATCCCATTTTTCAAGTACTCTTCAGCCTTAGGCAA
TTGCCCGGAAGCAAACCATTTCGCTTCTGTCAGAAACGCGTTGCACAAAC
TTCCCCACCCCTTTCGCAGGGAGTGCACAGGGTTATACCCATGCTCCTTA
TACACCTTGTTGCT
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