CV885111

Overview
NameCV885111
Unique NameCV885111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Library UCRCS04-UCRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4610 contig Csv1_Contig4610:394..1248. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV885111 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 366.311 bits (939), Expect = 1.223e-100
Identity = 175/198 (88.38%), Postives = 186/198 (93.94%), Query Frame = -1
Query:  262 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSSNI 855
            MIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RAV+YMVAQCLGAICG G VKAFQ SYY RYGGGAN LADGY+TGTGL AEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARS GAAVIYNK K WDD WIFWVGPFIGAAIAAFYHQF+LRAS SK+LGSF+S++N+
Sbjct:   88 MIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSYYDRYGGGANSLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRSAANV 285          
BLAST of CV885111 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.353e-99
Identity = 177/194 (91.24%), Postives = 182/194 (93.81%), Query Frame = -1
Query:  274 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKS 855
            MIFVLVYCTAGISGGHINPAVT GLFLARKVSLVR V+Y+VAQCLGAICGCG VKAFQ SYYTRYGGGANELADGY+ GTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARS GAAVIYN EKAWDDQWIFWVGP IGAA AAFYHQFILRA+A KALGSF S
Sbjct:   90 MIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQSSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNNEKAWDDQWIFWVGPMIGAAAAAFYHQFILRAAAIKALGSFGS 283          
BLAST of CV885111 vs. ExPASy Swiss-Prot
Match: PIP21_ARATH (Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.353e-99
Identity = 173/198 (87.37%), Postives = 186/198 (93.94%), Query Frame = -1
Query:  262 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSSNI 855
            MIF+LVYCTAGISGGHINPAVTFGLFLARKVSL RA++Y++AQCLGAICG G VKAFQ SYYTRYGGGAN LADGYSTGTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARS GAAVIYNK K WDD WIFWVGPFIGAAIAAFYHQF+LRAS SK+LGSF+S++N+
Sbjct:   90 MIFILVYCTAGISGGHINPAVTFGLFLARKVSLPRALLYIIAQCLGAICGVGFVKAFQSSYYTRYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKSKPWDDHWIFWVGPFIGAAIAAFYHQFVLRASGSKSLGSFRSAANV 287          
BLAST of CV885111 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 2.551e-98
Identity = 171/198 (86.36%), Postives = 184/198 (92.93%), Query Frame = -1
Query:  262 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSSNI 855
            MIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RAV+YMVAQCLGAICG G VKAFQ S+Y  YGGGAN LADGY+TGTGL AEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARS GAAVI+NK K WDD WIFWVGPFIGA IAAFYHQF+LRAS SK+LGSF+S++N+
Sbjct:   88 MIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQSSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKSKPWDDHWIFWVGPFIGATIAAFYHQFVLRASGSKSLGSFRSAANV 285          
BLAST of CV885111 vs. ExPASy Swiss-Prot
Match: PIP21_MAIZE (Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2)

HSP 1 Score: 356.681 bits (914), Expect = 9.693e-98
Identity = 173/196 (88.27%), Postives = 184/196 (93.88%), Query Frame = -1
Query:  268 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSS 855
            MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y+VAQCLGAICG GLVKAFQ +Y+ RYGGGAN LA GYS GTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI VTGTGINPARSLGAAVIYNK+K WDD WIFWVGP +GAAIAAFYHQ+ILRA A KALGSF+S++
Sbjct:   95 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIVAQCLGAICGVGLVKAFQSAYFDRYGGGANSLASGYSRGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVIYNKDKPWDDHWIFWVGPLVGAAIAAFYHQYILRAGAIKALGSFRSNA 290          
BLAST of CV885111 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 355.14 bits (910), Expect = 2.820e-97
Identity = 170/196 (86.73%), Postives = 186/196 (94.90%), Query Frame = -1
Query:  268 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSS 855
            MIF+LVYCTAGISGGHINPAVTFGLFLARKVSL+RAV+Y++AQCLGAICG GLVK FQ SYY RYGGGANEL+DGYS GTGLGAEIIGTFVLVYTVFSATDPKRNARDSH+PVLAPLPIGFAVFMVHLATI +TGTGINPARSLG AVIYNK+KAWDDQWIFWVGP IGAAIAA YHQ++LRASA+K LGS++S++
Sbjct:   94 MIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGVGLVKGFQSSYYARYGGGANELSDGYSKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGTAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASAAK-LGSYRSNA 288          
BLAST of CV885111 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 354.755 bits (909), Expect = 3.683e-97
Identity = 170/196 (86.73%), Postives = 183/196 (93.37%), Query Frame = -1
Query:  268 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSS 855
            MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRA++YMVAQCLGA+CG GLVKAFQ +Y+ RYGGGAN LA GYS G GLGAEI+GTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATI VTGTGINPARSLGAAV+YNK+K WDD WIFWVGP +GAAIAAFYHQ+ILRA A KALGSF+S++
Sbjct:   97 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGVGLVKAFQSAYFDRYGGGANSLASGYSRGAGLGAEIVGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSLGAAVVYNKDKPWDDHWIFWVGPLLGAAIAAFYHQYILRAGAIKALGSFRSNA 292          
BLAST of CV885111 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 5.319e-96
Identity = 169/196 (86.22%), Postives = 186/196 (94.90%), Query Frame = -1
Query:  268 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSS 855
            MIF+LVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y++AQCLGAICG GLVK FQ +YY RYGGGANEL+DGYS GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARSLGAAVIYNK+KAWDDQWIFWVGP IGAAIAA YHQ++LRASA+K LGS++S++
Sbjct:   94 MIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK-LGSYRSNA 288          
BLAST of CV885111 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 5.319e-96
Identity = 169/196 (86.22%), Postives = 186/196 (94.90%), Query Frame = -1
Query:  268 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSS 855
            MIF+LVYCTAGISGGHINPAVTFGLFLARKVSLVRA++Y++AQCLGAICG GLVK FQ +YY RYGGGANEL+DGYS GTGL AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVFMVHLATI +TGTGINPARSLGAAVIYNK+KAWDDQWIFWVGP IGAAIAA YHQ++LRASA+K LGS++S++
Sbjct:   95 MIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGVGLVKGFQSAYYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWIFWVGPLIGAAIAAAYHQYVLRASATK-LGSYRSNA 289          
BLAST of CV885111 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 6.947e-96
Identity = 168/198 (84.85%), Postives = 183/198 (92.42%), Query Frame = -1
Query:  262 MIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAICGCGLVKAFQKSYYTRYGGGANELADGYSTGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATISVTGTGINPARSLGAAVIYNKEKAWDDQWIFWVGPFIGAAIAAFYHQFILRASASKALGSFKSSSNI 855
            MIF+LVYCTAGISGGHINPAVTFGL LARKV+LVRAVMYMVAQCLGAICG  LVKAFQ +Y+TRYGGGAN L+DGYS GTG+ AEIIGTFVLVYTVFSATDPKR+ARDSHVPVLAPLPIGFAVF+VHLATI +TGTGINPARSLGAA+IYNK+KAWD  WIFWVGPF GAAIAAFYHQF+LRA A KALGSF+S  ++
Sbjct:   89 MIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSAYFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIVHLATIPITGTGINPARSLGAAIIYNKDKAWDHHWIFWVGPFAGAAIAAFYHQFVLRAGAIKALGSFRSQPHV 286          
The following BLAST results are available for this feature:
BLAST of CV885111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 186
Match NameE-valueIdentityDescription
PIP22_ARATH1.223e-10088.38Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP24_ARATH1.353e-9991.24Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP21_ARATH1.353e-9987.37Aquaporin PIP2-1 OS=Arabidopsis thaliana GN=PIP2-1... [more]
PIP23_ARATH2.551e-9886.36Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP21_MAIZE9.693e-9888.27Aquaporin PIP2-1 OS=Zea mays GN=PIP2-1 PE=1 SV=2[more]
PIP22_ORYSJ2.820e-9786.73Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP22_MAIZE3.683e-9786.73Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP24_MAIZE5.319e-9686.22Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP23_MAIZE5.319e-9686.22Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP25_ARATH6.947e-9684.85Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS04_2_012F12_T3 Ruby Orange Developing Flower cDNA Library UCRCS04-UCR Citrus sinensis cDNA clone UCRCS04_012_T3_F12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV885111 ID=CV885111; Name=CV885111; organism=Citrus sinensis; type=EST; length=855bp
AAAGCACTCACTATTGAAATTTCAGATAAAACCACGAGTACAGAAGTCGA
AAGGGGAAGGAATGCAAAGCAAATAATAATTTTTGGGGCACACTAAAAAC
GAGTGTCCTCAGGTAAACAAAAGACACACACAAAGTGCTGCGGGATCTAC
ACCAGCTCTACTAAATACTGATGCAAATAAAACAATGTACAAATTCCATA
GTCACGAAGCCGCTTGACAGCCATTGATTAATCCTCCAGTAATTATTTTA
AAAGTTAATTAAATGTTGGAGGAGCTTTTGAAGGATCCAAGAGCTTTAGA
AGCAGATGCTCTGAGGATGAATTGGTGGTAAAATGCAGCAATTGCAGCAC
CAATGAAGGGGCCAACCCAGAAGATCCATTGATCATCCCAAGCCTTCTCC
TTGTTGTAAATCACCGCAGCTCCCAAACTTCTAGCGGGGTTGATGCCAGT
TCCAGTGACAGAGATCGTAGCCAAGTGAACCATGAACACAGCAAATCCAA
TTGGCAATGGTGCCAAGACAGGAACATGGGAGTCCCTAGCATTTCTCTTG
GGATCAGTGGCGGAGAAAACAGTGTAGACAAGAACAAAGGTACCAATGAT
CTCAGCACCCAATCCAGTGCCAGTGCTGTACCCATCAGCGAGCTCATTGG
CTCCACCGCCGTATCTTGTGTAGTAAGACTTCTGGAAAGCCTTAACGAGC
CCGCAGCCACATATGGCTCCCAAACACTGAGCCACCATGTACATTACGGC
TCGCACCAGTGACACCTTCCGCGCCAAGAACAGCCCAAATGTCACCGCCG
GGTTAATGTGTCCACCAGAGATACCAGCAGTGCAGTAAACAAGAACAAAG
ATCAT
back to top