EY665363

Overview
NameEY665363
Unique NameEY665363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1028
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665363 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSJ (Protein IN2-1 homolog B OS=Oryza sativa subsp. japonica GN=GSTZ5 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.807e-43
Identity = 79/111 (71.17%), Postives = 96/111 (86.49%), Query Frame = 1
Query:   76 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVEQHFEGPSLLPDDS 408
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRPAWYKEKVYP NKVP+LEHN +V GESLDL+KY++ +FEGP+LLPDDS
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDS 119          
BLAST of EY665363 vs. ExPASy Swiss-Prot
Match: IN21B_ORYSI (Protein IN2-1 homolog B OS=Oryza sativa subsp. indica GN=GSTZ5 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.807e-43
Identity = 79/111 (71.17%), Postives = 96/111 (86.49%), Query Frame = 1
Query:   76 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVEQHFEGPSLLPDDS 408
            A++ +E LPP L S +E PPLFDGT RLY++Y CP+AQRAWI RNYKGLQDKIK+V ++L DRPAWYKEKVYP NKVP+LEHN +V GESLDL+KY++ +FEGP+LLPDDS
Sbjct:    9 ASSEKEVLPPSLTSSSEPPPLFDGTTRLYVAYHCPYAQRAWIARNYKGLQDKIKIVAIDLADRPAWYKEKVYPENKVPSLEHNNQVKGESLDLVKYIDTNFEGPALLPDDS 119          
BLAST of EY665363 vs. ExPASy Swiss-Prot
Match: IN21A_ORYSJ (Protein IN2-1 homolog A OS=Oryza sativa subsp. japonica GN=Os03g0283200 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 5.440e-40
Identity = 75/109 (68.81%), Postives = 91/109 (83.49%), Query Frame = 1
Query:   79 TTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVEQHFEGPSLLPDD 405
            ++ +E LP  L S +E P LFDGT RLYI Y CPFAQRAWI RN+KGLQDKI+LV ++LQD+PAWYKEKVY    VP+LEHNGK++GESLDLIKY++ HFEGP+LLP+D
Sbjct:    9 SSGKEALPAALGSASEPPRLFDGTTRLYICYFCPFAQRAWIIRNFKGLQDKIELVGIDLQDKPAWYKEKVYEQGTVPSLEHNGKIMGESLDLIKYIDSHFEGPALLPED 117          
BLAST of EY665363 vs. ExPASy Swiss-Prot
Match: IN21_MAIZE (Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 6.650e-38
Identity = 68/113 (60.18%), Postives = 95/113 (84.07%), Query Frame = 1
Query:   76 ATTAQENLPPPLDSKAELPPLFDGTPRLYISYSCPFAQRAWITRNYKGLQDKIKLVPLNLQDRPAWYKEKVYPANKVPALEHNGKVIGESLDLIKYVEQHFEGPSLLPDDSGE 414
            +++ +E+LPP L S ++ PP+FDGT RLYI Y CPFAQRAW+TRN KGLQDK++LV ++LQD+PAWYK+KVY    VP+LEH+ +V GESLDLI+Y++ +F+GP+LLP+D+ +
Sbjct:    8 SSSVKESLPPALGSTSQPPPVFDGTTRLYICYFCPFAQRAWVTRNLKGLQDKMELVAIDLQDKPAWYKDKVYAQGTVPSLEHDSEVRGESLDLIRYIDSNFDGPALLPEDAAK 120          
The following BLAST results are available for this feature:
BLAST of EY665363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
IN21B_ORYSJ1.807e-4371.17Protein IN2-1 homolog B OS=Oryza sativa subsp. jap... [more]
IN21B_ORYSI1.807e-4371.17Protein IN2-1 homolog B OS=Oryza sativa subsp. ind... [more]
IN21A_ORYSJ5.440e-4068.81Protein IN2-1 homolog A OS=Oryza sativa subsp. jap... [more]
IN21_MAIZE6.650e-3860.18Protein IN2-1 OS=Zea mays GN=IN2-1 PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-007-A08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665363 ID=EY665363; Name=EY665363; organism=Citrus sinensis; type=EST; length=1028bp
CCACGCGTCCGTAACTTTCTTCTTCAAGCAACCATTAGCATTCAGGAAAC
CTCTAGAGTCTTACCTTCCTCAATGGCCACCACAGCGCAAGAGAATCTTC
CTCCACCGTTGGATTCGAAGGCCGAGCTACCACCTCTGTTCGATGGAACT
CCCAGGTTGTACATTTCTTACTCGTGCCCATTTGCTCAGCGTGCGTGGAT
CACCAGGAACTACAAGGGATTACAAGACAAGATTAAGTTAGTTCCACTGA
ACCTCCAAGATAGGCCCGCTTGGTACAAGGAGAAGGTTTATCCTGCTAAC
AAGGTTCCAGCACTGGAGCACAATGGCAAAGTTATTGGAGAATCTCTTGA
TTTGATTAAATATGTTGAACAGCATTTTGAAGGGCCTTCCCTTTTACCTG
ATGATTCCGGAGAAACAAAAGATGGCTGAATGACTGTTTTTCCCACTCGA
ATACCTTCACCCACGATGTGTATACTTCATTCAAAGGAAACCCCGCAAAA
ACAGCTGGTCCTGCTTTTGAATTACTTAAAAAAGGCCCTTGGAAAAAATT
TTGAAGATAGGGCCCCGTTCTTCCTTGGAAAGTTCAATCAGGGGGGAAAT
AGCCCTAATTTCCCTTTGGTTGGAGAAGAATTCCCAAAATTTTTTTTTAC
CAAAAAAAATTTAAATTATTGAAAATCCACTGCCAGGAGGCGCAAAACGT
GGGGAACAGGGGATTAGGGAGATTAGGAAAAGACAGGAGGGCTAGCAGAG
GTGGGAAAAGGGGGAAATAAAAAAGAAACTTGTTAGAATTATATAGGGGA
GCGCCCATTCGGTGAGACCAAAGAATGGAGACACCCGAAAACCCGGGCCA
CATTAAACAAGAAGAAAAAGAGAAAACAATGCAGGGGGGAGAGGTGGGGG
AGGGGGGAGAAAACCGCGCAAAAATACAAAACAGAAAAGGACGAAAGGAT
AGAATAGCAAAGAAAATGAAAAATAGAATAATATGAACAGGGACGGGTAA
GGAGAGCAGGCAGAGCAGAAGAAGATAT
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